RNA–Protein interactions for RNA: ENST00000543957.5

ITM2C-209, Transcript of integral membrane protein 2C, humanhuman

TSL 5

Gene ITM2C, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-209ENST00000543957 SLC10A3P09131 477 aa16.25■□□□□ 0.19
ITM2C-209ENST00000543957 HABP4Q5JVS0 413 aaKnown RBP16.25■□□□□ 0.19
ITM2C-209ENST00000543957 CC2D1BQ5T0F9 858 aaKnown RBP16.25■□□□□ 0.19
ITM2C-209ENST00000543957 KIF6Q6ZMV9 814 aa16.25■□□□□ 0.19
ITM2C-209ENST00000543957 MCM10Q7L590 875 aa16.25■□□□□ 0.19
ITM2C-209ENST00000543957 MPNDQ8N594 471 aa16.25■□□□□ 0.19
ITM2C-209ENST00000543957 AKAP11Q9UKA4 1901 aa16.25■□□□□ 0.19
ITM2C-209ENST00000543957 YDJCA8MPS7 323 aa16.24■□□□□ 0.19
ITM2C-209ENST00000543957 NTSR2O95665 410 aa16.24■□□□□ 0.19
ITM2C-209ENST00000543957 PRKAR2BP31323 418 aa16.24■□□□□ 0.19
ITM2C-209ENST00000543957 TTLL7Q6ZT98 887 aa16.24■□□□□ 0.19
ITM2C-209ENST00000543957 REM2Q8IYK8 340 aaPredicted RBP16.24■□□□□ 0.19
ITM2C-209ENST00000543957 DCPSQ96C86 337 aaKnown RBP16.24■□□□□ 0.19
ITM2C-209ENST00000543957 HDAC9Q9UKV0 1011 aa16.24■□□□□ 0.19
ITM2C-209ENST00000543957 ZBTB12Q9Y330 459 aaPredicted RBP16.24■□□□□ 0.19
ITM2C-209ENST00000543957 COL3A1P02461 1466 aaPredicted RBP16.23■□□□□ 0.19
ITM2C-209ENST00000543957 ABCC4O15439 1325 aa16.23■□□□□ 0.19
ITM2C-209ENST00000543957 ADM5C9JUS6 153 aa16.23■□□□□ 0.19
ITM2C-209ENST00000543957 BBOX1O75936 387 aa16.23■□□□□ 0.19
ITM2C-209ENST00000543957 TBC1D10BQ4KMP7 808 aaPredicted RBP16.23■□□□□ 0.19
ITM2C-209ENST00000543957 SP8Q8IXZ3 490 aa16.23■□□□□ 0.19
ITM2C-209ENST00000543957 ZNF34Q8IZ26 560 aa16.23■□□□□ 0.19
ITM2C-209ENST00000543957 DPF2Q92785 391 aa16.23■□□□□ 0.19
ITM2C-209ENST00000543957 ZBTB3Q9H5J0 574 aa16.23■□□□□ 0.19
ITM2C-209ENST00000543957 NUP98P52948 1817 aa16.22■□□□□ 0.19
ITM2C-209ENST00000543957 EGFRP00533 1210 aa16.22■□□□□ 0.19
ITM2C-209ENST00000543957 PPP1R42Q7Z4L9 355 aa16.22■□□□□ 0.19
ITM2C-209ENST00000543957 RRP7AQ9Y3A4 280 aaKnown RBP16.22■□□□□ 0.19
ITM2C-209ENST00000543957 SLC10A5Q5PT55 438 aa16.21■□□□□ 0.19
ITM2C-209ENST00000543957 RBM26Q5T8P6 1007 aaKnown RBP16.21■□□□□ 0.19
ITM2C-209ENST00000543957 RSPH6AQ9H0K4 717 aa16.21■□□□□ 0.19
ITM2C-209ENST00000543957 DCTN1Q14203 1278 aa16.2■□□□□ 0.18
ITM2C-209ENST00000543957 ZNF296Q8WUU4 475 aaPredicted RBP16.2■□□□□ 0.18
ITM2C-209ENST00000543957 POLR2AP24928 1970 aaKnown RBP16.19■□□□□ 0.18
ITM2C-209ENST00000543957 PSMD14O00487 310 aa16.19■□□□□ 0.18
ITM2C-209ENST00000543957 PER1O15534 1290 aaPredicted RBP16.19■□□□□ 0.18
ITM2C-209ENST00000543957 MYL6BP14649 208 aa16.19■□□□□ 0.18
ITM2C-209ENST00000543957 TAF7Q15545 349 aaPredicted RBP16.19■□□□□ 0.18
ITM2C-209ENST00000543957 PARP10Q53GL7 1025 aa16.19■□□□□ 0.18
ITM2C-209ENST00000543957 GIGYF2Q6Y7W6 1299 aaKnown RBP16.19■□□□□ 0.18
ITM2C-209ENST00000543957 RASAL3Q86YV0 1011 aa16.19■□□□□ 0.18
ITM2C-209ENST00000543957 SULF1Q8IWU6 871 aa16.19■□□□□ 0.18
ITM2C-209ENST00000543957 MIS18AQ9NYP9 233 aa16.19■□□□□ 0.18
ITM2C-209ENST00000543957 TBC1D8O95759 1140 aa16.18■□□□□ 0.18
ITM2C-209ENST00000543957 FBXO46Q6PJ61 603 aaPredicted RBP16.18■□□□□ 0.18
ITM2C-209ENST00000543957 UTP14AQ9BVJ6 771 aaKnown RBP16.18■□□□□ 0.18
ITM2C-209ENST00000543957 HTATSF1O43719 755 aaKnown RBP16.17■□□□□ 0.18
ITM2C-209ENST00000543957 RPS12P25398 132 aaKnown RBP16.17■□□□□ 0.18
ITM2C-209ENST00000543957 CDCA5Q96FF9 252 aa16.17■□□□□ 0.18
ITM2C-209ENST00000543957 WASHC4Q2M389 1173 aa16.16■□□□□ 0.18
ITM2C-209ENST00000543957 DDX46Q7L014 1031 aaKnown RBP16.16■□□□□ 0.18
ITM2C-209ENST00000543957 DBNDD1Q9H9R9 158 aa16.16■□□□□ 0.18
ITM2C-209ENST00000543957 GGA3Q9NZ52 723 aa16.16■□□□□ 0.18
ITM2C-209ENST00000543957 LAMB4A4D0S4 1761 aa16.15■□□□□ 0.18
ITM2C-209ENST00000543957 GPR25O00155 361 aa16.15■□□□□ 0.18
ITM2C-209ENST00000543957 GRAPQ13588 217 aa16.15■□□□□ 0.18
ITM2C-209ENST00000543957 KIF4BQ2VIQ3 1234 aa16.15■□□□□ 0.18
ITM2C-209ENST00000543957 GRAPLQ8TC17 118 aaPredicted RBP16.15■□□□□ 0.18
ITM2C-209ENST00000543957 HCLS1P14317 486 aaPredicted RBP16.14■□□□□ 0.17
ITM2C-209ENST00000543957 FXR1P51114 621 aaKnown RBP eCLIP16.14■□□□□ 0.17
ITM2C-209ENST00000543957 CNGB1Q14028 1251 aaPredicted RBP16.14■□□□□ 0.17
ITM2C-209ENST00000543957 NOM1Q5C9Z4 860 aaKnown RBP16.14■□□□□ 0.17
ITM2C-209ENST00000543957 ASTN2O75129 1339 aaPredicted RBP16.14■□□□□ 0.17
ITM2C-209ENST00000543957 RIMBP2O15034 1052 aa16.13■□□□□ 0.17
ITM2C-209ENST00000543957 FKBP1BP68106 108 aa16.13■□□□□ 0.17
ITM2C-209ENST00000543957 TMC4Q7Z404 712 aa16.13■□□□□ 0.17
ITM2C-209ENST00000543957 KCNQ5Q9NR82 932 aa16.13■□□□□ 0.17
ITM2C-209ENST00000543957 DUOX1Q9NRD9 1551 aa16.13■□□□□ 0.17
ITM2C-209ENST00000543957 U2AF1L5P0DN76 240 aaPredicted RBP16.12■□□□□ 0.17
ITM2C-209ENST00000543957 EIF4A1P60842 406 aaKnown RBP16.12■□□□□ 0.17
ITM2C-209ENST00000543957 U2AF1Q01081 240 aaKnown RBP eCLIP16.12■□□□□ 0.17
ITM2C-209ENST00000543957 PNISRQ8TF01 805 aaKnown RBP16.12■□□□□ 0.17
ITM2C-209ENST00000543957 CFAP53Q96M91 514 aa16.12■□□□□ 0.17
ITM2C-209ENST00000543957 NSFL1CQ9UNZ2 370 aaKnown RBP16.12■□□□□ 0.17
ITM2C-209ENST00000543957 NUDCQ9Y266 331 aa16.12■□□□□ 0.17
ITM2C-209ENST00000543957 RTL9Q8NET4 1388 aa16.12■□□□□ 0.17
ITM2C-209ENST00000543957 ECE2O60344 883 aa16.11■□□□□ 0.17
ITM2C-209ENST00000543957 TM4SF4P48230 202 aa16.11■□□□□ 0.17
ITM2C-209ENST00000543957 MKI67P46013 3256 aaKnown RBP16.11■□□□□ 0.17
ITM2C-209ENST00000543957 C6orf229H3BNL8 230 aa16.1■□□□□ 0.17
ITM2C-209ENST00000543957 FKTNO75072 461 aa16.1■□□□□ 0.17
ITM2C-209ENST00000543957 DOK7Q18PE1 504 aa16.1■□□□□ 0.17
ITM2C-209ENST00000543957 ANGEL2Q5VTE6 544 aaKnown RBP16.1■□□□□ 0.17
ITM2C-209ENST00000543957 ERBB4Q15303 1308 aa16.1■□□□□ 0.17
ITM2C-209ENST00000543957 POTEFA5A3E0 1075 aa16.09■□□□□ 0.17
ITM2C-209ENST00000543957 UBE2Q2LH0YL09 131 aa16.09■□□□□ 0.17
ITM2C-209ENST00000543957 VIL1P09327 827 aaKnown RBP16.09■□□□□ 0.17
ITM2C-209ENST00000543957 SCARF1Q14162 830 aa16.09■□□□□ 0.17
ITM2C-209ENST00000543957 MOB2Q70IA6 237 aa16.09■□□□□ 0.17
ITM2C-209ENST00000543957 THUMPD2Q9BTF0 503 aaKnown RBP16.09■□□□□ 0.17
ITM2C-209ENST00000543957 POLLQ9UGP5 575 aa16.09■□□□□ 0.17
ITM2C-209ENST00000543957 ANKRD36CQ5JPF3 1778 aa16.08■□□□□ 0.17
ITM2C-209ENST00000543957 PAPPA2Q9BXP8 1791 aa16.08■□□□□ 0.17
ITM2C-209ENST00000543957 INTS3Q68E01 1043 aaKnown RBP16.08■□□□□ 0.16
ITM2C-209ENST00000543957 NLRP10Q86W26 655 aa16.08■□□□□ 0.16
ITM2C-209ENST00000543957 EYA3Q99504 573 aa16.08■□□□□ 0.16
ITM2C-209ENST00000543957 TRMT112Q9UI30 125 aaKnown RBP16.08■□□□□ 0.16
ITM2C-209ENST00000543957 LAMB2P55268 1798 aa16.08■□□□□ 0.16
ITM2C-209ENST00000543957 ZNF280AP59817 542 aaPredicted RBP16.07■□□□□ 0.16
ITM2C-209ENST00000543957 GPSM2P81274 684 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms