RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 ZKSCAN5Q9Y2L8 839 aa16.09■□□□□ 0.17
PPME1-208ENST00000543525 FIBPO43427 364 aa16.08■□□□□ 0.16
PPME1-208ENST00000543525 KLHDC4Q8TBB5 520 aa16.08■□□□□ 0.16
PPME1-208ENST00000543525 PDCP20941 246 aa16.07■□□□□ 0.16
PPME1-208ENST00000543525 TSGA10IPQ3SY00 556 aa16.07■□□□□ 0.16
PPME1-208ENST00000543525 LRP10Q7Z4F1 713 aa16.07■□□□□ 0.16
PPME1-208ENST00000543525 TPCN1Q9ULQ1 816 aa16.07■□□□□ 0.16
PPME1-208ENST00000543525 USP16Q9Y5T5 823 aa16.07■□□□□ 0.16
PPME1-208ENST00000543525 RFX7Q2KHR2 1363 aa16.07■□□□□ 0.16
PPME1-208ENST00000543525 VPS37CA5D8V6 355 aaPredicted RBP16.07■□□□□ 0.16
PPME1-208ENST00000543525 RPS6KB1P23443 525 aa16.07■□□□□ 0.16
PPME1-208ENST00000543525 RFX5P48382 616 aaPredicted RBP16.07■□□□□ 0.16
PPME1-208ENST00000543525 RABL6Q3YEC7 729 aaPredicted RBP16.07■□□□□ 0.16
PPME1-208ENST00000543525 TNNI3KQ59H18 835 aa16.07■□□□□ 0.16
PPME1-208ENST00000543525 DDX54Q8TDD1 881 aaKnown RBP16.07■□□□□ 0.16
PPME1-208ENST00000543525 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.07■□□□□ 0.16
PPME1-208ENST00000543525 FPGT-TNNI3KV9GXZ4 949 aa16.07■□□□□ 0.16
PPME1-208ENST00000543525 COL18A1P39060 1754 aa16.07■□□□□ 0.16
PPME1-208ENST00000543525 PTMAP06454 111 aaKnown RBP16.06■□□□□ 0.16
PPME1-208ENST00000543525 CABP4P57796 275 aa16.06■□□□□ 0.16
PPME1-208ENST00000543525 ST3GAL1Q11201 340 aa16.06■□□□□ 0.16
PPME1-208ENST00000543525 KRT32Q14532 448 aa16.06■□□□□ 0.16
PPME1-208ENST00000543525 LARP1BQ659C4 914 aaKnown RBP16.06■□□□□ 0.16
PPME1-208ENST00000543525 NECAB1Q8N987 351 aa16.06■□□□□ 0.16
PPME1-208ENST00000543525 TCHHQ07283 1943 aa16.06■□□□□ 0.16
PPME1-208ENST00000543525 DNM1Q05193 864 aaKnown RBP16.06■□□□□ 0.16
PPME1-208ENST00000543525 PTPN12Q05209 780 aaKnown RBP16.06■□□□□ 0.16
PPME1-208ENST00000543525 TFCP2Q12800 502 aa16.06■□□□□ 0.16
PPME1-208ENST00000543525 DCCP43146 1447 aa16.05■□□□□ 0.16
PPME1-208ENST00000543525 AHDC1Q5TGY3 1603 aaPredicted RBP16.05■□□□□ 0.16
PPME1-208ENST00000543525 CYP27B1O15528 508 aa16.05■□□□□ 0.16
PPME1-208ENST00000543525 TAF5LO75529 589 aa16.05■□□□□ 0.16
PPME1-208ENST00000543525 TERF1P54274 439 aa16.05■□□□□ 0.16
PPME1-208ENST00000543525 UBE3BQ7Z3V4 1068 aa16.05■□□□□ 0.16
PPME1-208ENST00000543525 PLBD2Q8NHP8 589 aa16.05■□□□□ 0.16
PPME1-208ENST00000543525 A0A087WZG4 1122 aa16.04■□□□□ 0.16
PPME1-208ENST00000543525 USPL1Q5W0Q7 1092 aa16.04■□□□□ 0.16
PPME1-208ENST00000543525 DBNLQ9UJU6 430 aaKnown RBP16.04■□□□□ 0.16
PPME1-208ENST00000543525 AFDNP55196 1824 aaKnown RBP16.04■□□□□ 0.16
PPME1-208ENST00000543525 PKD1L3Q7Z443 1732 aa16.04■□□□□ 0.16
PPME1-208ENST00000543525 KRT85P78386 507 aa16.04■□□□□ 0.16
PPME1-208ENST00000543525 ZNF589Q86UQ0 364 aaPredicted RBP16.04■□□□□ 0.16
PPME1-208ENST00000543525 U3KPZ7 1027 aaPredicted RBP16.04■□□□□ 0.16
PPME1-208ENST00000543525 TNS3Q68CZ2 1445 aa16.03■□□□□ 0.16
PPME1-208ENST00000543525 JARID2Q92833 1246 aaPredicted RBP16.03■□□□□ 0.16
PPME1-208ENST00000543525 TPRNQ4KMQ1 711 aa16.02■□□□□ 0.16
PPME1-208ENST00000543525 HAUS7Q99871 368 aa16.02■□□□□ 0.16
PPME1-208ENST00000543525 ARFGEF2Q9Y6D5 1785 aa16.02■□□□□ 0.15
PPME1-208ENST00000543525 AFF2P51816 1311 aa16.02■□□□□ 0.15
PPME1-208ENST00000543525 ATP5J2-PTCD1G3V325 749 aa16.02■□□□□ 0.15
PPME1-208ENST00000543525 PTCD1O75127 700 aaKnown RBP16.02■□□□□ 0.15
PPME1-208ENST00000543525 PIP4K2AP48426 406 aaPredicted RBP16.02■□□□□ 0.15
PPME1-208ENST00000543525 TOB2Q14106 344 aaPredicted RBP16.02■□□□□ 0.15
PPME1-208ENST00000543525 CHRNA2Q15822 529 aa16.02■□□□□ 0.15
PPME1-208ENST00000543525 DDX17Q92841 729 aaKnown RBP16.02■□□□□ 0.15
PPME1-208ENST00000543525 EDC3Q96F86 508 aaKnown RBP16.02■□□□□ 0.15
PPME1-208ENST00000543525 LAMB4A4D0S4 1761 aa16.01■□□□□ 0.15
PPME1-208ENST00000543525 CASP7P55210 303 aa16.01■□□□□ 0.15
PPME1-208ENST00000543525 CADPS2Q86UW7 1296 aa16.01■□□□□ 0.15
PPME1-208ENST00000543525 CABLES1Q8TDN4 633 aa16.01■□□□□ 0.15
PPME1-208ENST00000543525 CPDO75976 1380 aa16.01■□□□□ 0.15
PPME1-208ENST00000543525 ELP1O95163 1332 aa16■□□□□ 0.15
PPME1-208ENST00000543525 NUTM2BA6NNL0 878 aaPredicted RBP16■□□□□ 0.15
PPME1-208ENST00000543525 NUTM2EB1AL46 878 aaPredicted RBP16■□□□□ 0.15
PPME1-208ENST00000543525 HCLS1P14317 486 aaPredicted RBP16■□□□□ 0.15
PPME1-208ENST00000543525 MCMDC2Q4G0Z9 681 aa16■□□□□ 0.15
PPME1-208ENST00000543525 NUTM2AQ8IVF1 878 aaPredicted RBP16■□□□□ 0.15
PPME1-208ENST00000543525 NEK1Q96PY6 1258 aa16■□□□□ 0.15
PPME1-208ENST00000543525 DNAJC2Q99543 621 aaKnown RBP16■□□□□ 0.15
PPME1-208ENST00000543525 DBNDD2Q9BQY9 259 aa16■□□□□ 0.15
PPME1-208ENST00000543525 H7C1W4 665 aa16■□□□□ 0.15
PPME1-208ENST00000543525 LMBR1LQ6UX01 489 aa16■□□□□ 0.15
PPME1-208ENST00000543525 CDC37L1Q7L3B6 337 aa16■□□□□ 0.15
PPME1-208ENST00000543525 TICAM2Q86XR7 235 aa16■□□□□ 0.15
PPME1-208ENST00000543525 TCEANC2Q96MN5 208 aa16■□□□□ 0.15
PPME1-208ENST00000543525 FUCA2Q9BTY2 467 aa16■□□□□ 0.15
PPME1-208ENST00000543525 PARP4Q9UKK3 1724 aaKnown RBP15.99■□□□□ 0.15
PPME1-208ENST00000543525 GIMAP6Q6P9H5 292 aa15.99■□□□□ 0.15
PPME1-208ENST00000543525 SCAND2PQ9GZW5 306 aaPredicted RBP15.99■□□□□ 0.15
PPME1-208ENST00000543525 USP25Q9UHP3 1055 aa15.99■□□□□ 0.15
PPME1-208ENST00000543525 TAF6LQ9Y6J9 622 aa15.99■□□□□ 0.15
PPME1-208ENST00000543525 SPATA31A3Q5VYP0 1347 aa15.98■□□□□ 0.15
PPME1-208ENST00000543525 ZNF609O15014 1411 aa15.98■□□□□ 0.15
PPME1-208ENST00000543525 RRP9O43818 475 aaKnown RBP15.98■□□□□ 0.15
PPME1-208ENST00000543525 ADCY5O95622 1261 aa15.98■□□□□ 0.15
PPME1-208ENST00000543525 RBM6P78332 1123 aaKnown RBP15.98■□□□□ 0.15
PPME1-208ENST00000543525 KIAA2012Q0VF49 1180 aa15.98■□□□□ 0.15
PPME1-208ENST00000543525 KBTBD3Q8NAB2 608 aa15.98■□□□□ 0.15
PPME1-208ENST00000543525 GPR108Q9NPR9 543 aa15.98■□□□□ 0.15
PPME1-208ENST00000543525 CWC25Q9NXE8 425 aaPredicted RBP15.98■□□□□ 0.15
PPME1-208ENST00000543525 CHMP3Q9Y3E7 222 aa15.98■□□□□ 0.15
PPME1-208ENST00000543525 DTNBO60941 627 aa15.98■□□□□ 0.15
PPME1-208ENST00000543525 KDM4AO75164 1064 aa15.98■□□□□ 0.15
PPME1-208ENST00000543525 FOXO4P98177 505 aa15.98■□□□□ 0.15
PPME1-208ENST00000543525 TTC6Q86TZ1 520 aa15.98■□□□□ 0.15
PPME1-208ENST00000543525 R3HCC1Q9Y3T6 440 aaKnown RBP15.98■□□□□ 0.15
PPME1-208ENST00000543525 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.98■□□□□ 0.15
PPME1-208ENST00000543525 SH3TC1Q8TE82 1336 aa15.97■□□□□ 0.15
PPME1-208ENST00000543525 CCDC192P0DO97 292 aa15.97■□□□□ 0.15
PPME1-208ENST00000543525 STK3Q13188 491 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 178.6 ms