RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 RBSNQ9H1K0 784 aa9.57□□□□□ -0.88
PDLIM5-221ENST00000542407 EVA1CP58658 441 aa9.57□□□□□ -0.88
PDLIM5-221ENST00000542407 MCTP1Q6DN14 999 aa9.57□□□□□ -0.88
PDLIM5-221ENST00000542407 TTC5Q8N0Z6 440 aa9.57□□□□□ -0.88
PDLIM5-221ENST00000542407 RAI14Q9P0K7 980 aa9.57□□□□□ -0.88
PDLIM5-221ENST00000542407 EXOC6BQ9Y2D4 811 aa9.57□□□□□ -0.88
PDLIM5-221ENST00000542407 MTX1Q13505 466 aa9.57□□□□□ -0.88
PDLIM5-221ENST00000542407 FOXD4L6Q3SYB3 417 aaPredicted RBP9.57□□□□□ -0.88
PDLIM5-221ENST00000542407 FOXD4L3Q6VB84 417 aaPredicted RBP9.57□□□□□ -0.88
PDLIM5-221ENST00000542407 ZNF513Q8N8E2 541 aaPredicted RBP9.57□□□□□ -0.88
PDLIM5-221ENST00000542407 OSBPL3Q9H4L5 887 aa9.57□□□□□ -0.88
PDLIM5-221ENST00000542407 ZKSCAN5Q9Y2L8 839 aa9.57□□□□□ -0.88
PDLIM5-221ENST00000542407 IGKV5-2P06315 115 aa9.56□□□□□ -0.88
PDLIM5-221ENST00000542407 CWF19L2Q2TBE0 894 aaKnown RBP9.56□□□□□ -0.88
PDLIM5-221ENST00000542407 TBC1D9Q6ZT07 1266 aa9.56□□□□□ -0.88
PDLIM5-221ENST00000542407 MTMR7Q9Y216 660 aa9.56□□□□□ -0.88
PDLIM5-221ENST00000542407 U3KPZ7 1027 aaPredicted RBP9.56□□□□□ -0.88
PDLIM5-221ENST00000542407 ITGB4P16144 1822 aa9.56□□□□□ -0.88
PDLIM5-221ENST00000542407 DDIT3P35638 169 aa9.56□□□□□ -0.88
PDLIM5-221ENST00000542407 KLHL40Q2TBA0 621 aa9.56□□□□□ -0.88
PDLIM5-221ENST00000542407 NBPF10Q6P3W6 841 aaKnown RBP9.56□□□□□ -0.88
PDLIM5-221ENST00000542407 RINLQ6ZS11 566 aa9.56□□□□□ -0.88
PDLIM5-221ENST00000542407 PPP1R42Q7Z4L9 355 aa9.56□□□□□ -0.88
PDLIM5-221ENST00000542407 LINS1Q8NG48 757 aa9.56□□□□□ -0.88
PDLIM5-221ENST00000542407 FBXO41Q8TF61 875 aa9.56□□□□□ -0.88
PDLIM5-221ENST00000542407 XAGE3Q8WTP9 111 aa9.56□□□□□ -0.88
PDLIM5-221ENST00000542407 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.55□□□□□ -0.88
PDLIM5-221ENST00000542407 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.55□□□□□ -0.88
PDLIM5-221ENST00000542407 KCNJ4P48050 445 aa9.55□□□□□ -0.88
PDLIM5-221ENST00000542407 KAZALD1Q96I82 304 aa9.55□□□□□ -0.88
PDLIM5-221ENST00000542407 CEP83Q9Y592 693 aa9.55□□□□□ -0.88
PDLIM5-221ENST00000542407 RAD21O60216 631 aa9.55□□□□□ -0.88
PDLIM5-221ENST00000542407 MYL6BP14649 208 aa9.55□□□□□ -0.88
PDLIM5-221ENST00000542407 PRIM1P49642 420 aaKnown RBP9.55□□□□□ -0.88
PDLIM5-221ENST00000542407 ZSCAN23Q3MJ62 389 aa9.55□□□□□ -0.88
PDLIM5-221ENST00000542407 HS1BP3Q53T59 392 aa9.55□□□□□ -0.88
PDLIM5-221ENST00000542407 RNF214Q8ND24 703 aa9.55□□□□□ -0.88
PDLIM5-221ENST00000542407 DDX54Q8TDD1 881 aaKnown RBP9.55□□□□□ -0.88
PDLIM5-221ENST00000542407 LRRCC1Q9C099 1032 aa9.55□□□□□ -0.88
PDLIM5-221ENST00000542407 NBPF26B4DH59 902 aa9.54□□□□□ -0.88
PDLIM5-221ENST00000542407 BAG4O95429 457 aaKnown RBP9.54□□□□□ -0.88
PDLIM5-221ENST00000542407 DDX58O95786 925 aaKnown RBP9.54□□□□□ -0.88
PDLIM5-221ENST00000542407 RBM25P49756 843 aaKnown RBP9.54□□□□□ -0.88
PDLIM5-221ENST00000542407 CT47A1Q5JQC4 288 aaPredicted RBP9.54□□□□□ -0.88
PDLIM5-221ENST00000542407 NBPF14Q5TI25 921 aa9.54□□□□□ -0.88
PDLIM5-221ENST00000542407 ARMCX6Q7L4S7 300 aa9.54□□□□□ -0.88
PDLIM5-221ENST00000542407 COPS6Q7L5N1 327 aa9.54□□□□□ -0.88
PDLIM5-221ENST00000542407 NBPF15Q8N660 670 aa9.54□□□□□ -0.88
PDLIM5-221ENST00000542407 TJP1Q07157 1748 aa9.54□□□□□ -0.88
PDLIM5-221ENST00000542407 CD2BP2O95400 341 aaKnown RBP9.54□□□□□ -0.88
PDLIM5-221ENST00000542407 PIP4K2AP48426 406 aaPredicted RBP9.54□□□□□ -0.88
PDLIM5-221ENST00000542407 PDE1AP54750 535 aa9.54□□□□□ -0.88
PDLIM5-221ENST00000542407 AIMP1Q12904 312 aaKnown RBP9.54□□□□□ -0.88
PDLIM5-221ENST00000542407 NBPF5PQ86XG9 351 aaPredicted RBP9.54□□□□□ -0.88
PDLIM5-221ENST00000542407 RBM42Q9BTD8 480 aaKnown RBP9.54□□□□□ -0.88
PDLIM5-221ENST00000542407 METTL22Q9BUU2 404 aaPredicted RBP9.54□□□□□ -0.88
PDLIM5-221ENST00000542407 RBM27Q9P2N5 1060 aaKnown RBP9.54□□□□□ -0.88
PDLIM5-221ENST00000542407 AFDNP55196 1824 aaKnown RBP9.54□□□□□ -0.88
PDLIM5-221ENST00000542407 NWD2Q9ULI1 1742 aa9.54□□□□□ -0.88
PDLIM5-221ENST00000542407 NEURL1BA8MQ27 555 aa9.54□□□□□ -0.88
PDLIM5-221ENST00000542407 CDC45O75419 566 aa9.54□□□□□ -0.88
PDLIM5-221ENST00000542407 TSHZ1Q6ZSZ6 1077 aa9.54□□□□□ -0.88
PDLIM5-221ENST00000542407 SDSP20132 328 aa9.53□□□□□ -0.88
PDLIM5-221ENST00000542407 SSR1P43307 286 aaKnown RBP9.53□□□□□ -0.88
PDLIM5-221ENST00000542407 CCDC82Q8N4S0 544 aa9.53□□□□□ -0.88
PDLIM5-221ENST00000542407 STAP2Q9UGK3 403 aa9.53□□□□□ -0.88
PDLIM5-221ENST00000542407 SLIT2O94813 1529 aa9.53□□□□□ -0.88
PDLIM5-221ENST00000542407 TRIM6-TRIM34B2RNG4 842 aa9.53□□□□□ -0.88
PDLIM5-221ENST00000542407 GRM8O00222 908 aa9.53□□□□□ -0.88
PDLIM5-221ENST00000542407 SRGAP3O43295 1099 aa9.53□□□□□ -0.88
PDLIM5-221ENST00000542407 ATP2B3Q16720 1220 aa9.53□□□□□ -0.88
PDLIM5-221ENST00000542407 SNX21Q969T3 373 aa9.53□□□□□ -0.88
PDLIM5-221ENST00000542407 SUCLG2Q96I99 432 aa9.53□□□□□ -0.88
PDLIM5-221ENST00000542407 TRIM34Q9BYJ4 488 aa9.53□□□□□ -0.88
PDLIM5-221ENST00000542407 CCDC39Q9UFE4 941 aa9.53□□□□□ -0.88
PDLIM5-221ENST00000542407 COL15A1P39059 1388 aa9.53□□□□□ -0.88
PDLIM5-221ENST00000542407 RAB11FIP3O75154 756 aa9.52□□□□□ -0.88
PDLIM5-221ENST00000542407 EXOC8Q8IYI6 725 aa9.52□□□□□ -0.88
PDLIM5-221ENST00000542407 BORCS6Q96GS4 357 aa9.52□□□□□ -0.88
PDLIM5-221ENST00000542407 DOT1LQ8TEK3 1739 aa9.52□□□□□ -0.89
PDLIM5-221ENST00000542407 BCL9O00512 1426 aa9.52□□□□□ -0.89
PDLIM5-221ENST00000542407 GCKRQ14397 625 aa9.52□□□□□ -0.89
PDLIM5-221ENST00000542407 ANKRD13DQ6ZTN6 518 aa9.52□□□□□ -0.89
PDLIM5-221ENST00000542407 RIC3Q7Z5B4 369 aa9.52□□□□□ -0.89
PDLIM5-221ENST00000542407 PIGBQ92521 554 aa9.52□□□□□ -0.89
PDLIM5-221ENST00000542407 KIF2CQ99661 725 aa9.52□□□□□ -0.89
PDLIM5-221ENST00000542407 K7ELQ4 463 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-221ENST00000542407 PRPF40AO75400 957 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-221ENST00000542407 DNAJC14Q6Y2X3 702 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-221ENST00000542407 C9orf78Q9NZ63 289 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-221ENST00000542407 AOX1Q06278 1338 aa9.51□□□□□ -0.89
PDLIM5-221ENST00000542407 MX1P20591 662 aa9.51□□□□□ -0.89
PDLIM5-221ENST00000542407 ZNF445P59923 1031 aa9.51□□□□□ -0.89
PDLIM5-221ENST00000542407 KIAA2012Q0VF49 1180 aa9.51□□□□□ -0.89
PDLIM5-221ENST00000542407 TSHZ3Q63HK5 1081 aa9.51□□□□□ -0.89
PDLIM5-221ENST00000542407 PLBD2Q8NHP8 589 aa9.51□□□□□ -0.89
PDLIM5-221ENST00000542407 RHPN1Q8TCX5 695 aa9.51□□□□□ -0.89
PDLIM5-221ENST00000542407 MYD88Q99836 296 aa9.51□□□□□ -0.89
PDLIM5-221ENST00000542407 BICC1Q9H694 974 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-221ENST00000542407 SPATA31A1Q5TZJ5 1347 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms