RNA–Protein interactions for RNA: ENST00000541478.5

OTUB1-210, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-210ENST00000541478 RFX7Q2KHR2 1363 aa24.38■■□□□ 1.49
OTUB1-210ENST00000541478 IFIT5Q13325 482 aaKnown RBP24.38■■□□□ 1.49
OTUB1-210ENST00000541478 TAF7LQ5H9L4 462 aa24.38■■□□□ 1.49
OTUB1-210ENST00000541478 DBNDD2Q9BQY9 259 aa24.38■■□□□ 1.49
OTUB1-210ENST00000541478 TRMT112Q9UI30 125 aaKnown RBP24.37■■□□□ 1.49
OTUB1-210ENST00000541478 PALD1Q9ULE6 856 aa24.37■■□□□ 1.49
OTUB1-210ENST00000541478 ZNF831Q5JPB2 1677 aa24.37■■□□□ 1.49
OTUB1-210ENST00000541478 NEK4P51957 841 aa24.36■■□□□ 1.49
OTUB1-210ENST00000541478 ZNF609O15014 1411 aa24.36■■□□□ 1.49
OTUB1-210ENST00000541478 LRRC24Q50LG9 513 aa24.35■■□□□ 1.49
OTUB1-210ENST00000541478 ZNF34Q8IZ26 560 aa24.35■■□□□ 1.49
OTUB1-210ENST00000541478 ZNF594Q96JF6 807 aaPredicted RBP24.35■■□□□ 1.49
OTUB1-210ENST00000541478 CEP126Q9P2H0 1117 aa24.35■■□□□ 1.49
OTUB1-210ENST00000541478 CTSWP56202 376 aa24.35■■□□□ 1.49
OTUB1-210ENST00000541478 ITPK1Q13572 414 aa24.35■■□□□ 1.49
OTUB1-210ENST00000541478 AKAP2Q9Y2D5 859 aa24.35■■□□□ 1.49
OTUB1-210ENST00000541478 IRS4O14654 1257 aaPredicted RBP24.34■■□□□ 1.49
OTUB1-210ENST00000541478 KCNQ2O43526 872 aa24.34■■□□□ 1.49
OTUB1-210ENST00000541478 NEUROD6Q96NK8 337 aa24.34■■□□□ 1.49
OTUB1-210ENST00000541478 HAUS7Q99871 368 aa24.34■■□□□ 1.49
OTUB1-210ENST00000541478 AK7Q96M32 723 aa24.33■■□□□ 1.49
OTUB1-210ENST00000541478 SNRKQ9NRH2 765 aa24.33■■□□□ 1.49
OTUB1-210ENST00000541478 PDE8AO60658 829 aa24.33■■□□□ 1.48
OTUB1-210ENST00000541478 TICAM2Q86XR7 235 aa24.33■■□□□ 1.48
OTUB1-210ENST00000541478 MYH3P11055 1940 aa24.32■■□□□ 1.48
OTUB1-210ENST00000541478 NMIQ13287 307 aaPredicted RBP24.32■■□□□ 1.48
OTUB1-210ENST00000541478 TTLL11Q8NHH1 800 aa24.32■■□□□ 1.48
OTUB1-210ENST00000541478 THSD7AQ9UPZ6 1657 aa24.32■■□□□ 1.48
OTUB1-210ENST00000541478 UBN2Q6ZU65 1347 aa24.32■■□□□ 1.48
OTUB1-210ENST00000541478 A0A1B0GUL7 405 aa24.31■■□□□ 1.48
OTUB1-210ENST00000541478 PARP10Q53GL7 1025 aa24.31■■□□□ 1.48
OTUB1-210ENST00000541478 COL5A3P25940 1745 aaPredicted RBP24.31■■□□□ 1.48
OTUB1-210ENST00000541478 CCDC171Q6TFL3 1326 aa24.31■■□□□ 1.48
OTUB1-210ENST00000541478 ANKRD18BA2A2Z9 1011 aa24.31■■□□□ 1.48
OTUB1-210ENST00000541478 DNAJC2Q99543 621 aaKnown RBP24.31■■□□□ 1.48
OTUB1-210ENST00000541478 PUS3Q9BZE2 481 aaKnown RBP24.31■■□□□ 1.48
OTUB1-210ENST00000541478 CWC22Q9HCG8 908 aaKnown RBP24.31■■□□□ 1.48
OTUB1-210ENST00000541478 CAMTA2O94983 1202 aa24.3■■□□□ 1.48
OTUB1-210ENST00000541478 HSP90B1P14625 803 aaKnown RBP24.3■■□□□ 1.48
OTUB1-210ENST00000541478 ITGA6P23229 1130 aa24.3■■□□□ 1.48
OTUB1-210ENST00000541478 FAM227BQ96M60 508 aa24.3■■□□□ 1.48
OTUB1-210ENST00000541478 FOXD4L1Q9NU39 408 aa24.3■■□□□ 1.48
OTUB1-210ENST00000541478 ZNF652Q9Y2D9 606 aa24.3■■□□□ 1.48
OTUB1-210ENST00000541478 TIMM10P62072 90 aa24.29■■□□□ 1.48
OTUB1-210ENST00000541478 CCDC85AQ96PX6 553 aaPredicted RBP24.29■■□□□ 1.48
OTUB1-210ENST00000541478 SNX14Q9Y5W7 946 aa24.29■■□□□ 1.48
OTUB1-210ENST00000541478 AFF2P51816 1311 aa24.29■■□□□ 1.48
OTUB1-210ENST00000541478 RAB3GAP1Q15042 981 aa24.28■■□□□ 1.48
OTUB1-210ENST00000541478 SYNE4Q8N205 404 aa24.28■■□□□ 1.48
OTUB1-210ENST00000541478 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.28■■□□□ 1.48
OTUB1-210ENST00000541478 GREM2Q9H772 168 aa24.28■■□□□ 1.48
OTUB1-210ENST00000541478 SH3TC1Q8TE82 1336 aa24.28■■□□□ 1.48
OTUB1-210ENST00000541478 MED23Q9ULK4 1368 aa24.28■■□□□ 1.48
OTUB1-210ENST00000541478 MYH14Q7Z406 1995 aaKnown RBP24.28■■□□□ 1.48
OTUB1-210ENST00000541478 A0A0D9SFI3 127 aa24.27■■□□□ 1.48
OTUB1-210ENST00000541478 UTP14AQ9BVJ6 771 aaKnown RBP24.27■■□□□ 1.48
OTUB1-210ENST00000541478 ZKSCAN1P17029 563 aaPredicted RBP24.26■■□□□ 1.47
OTUB1-210ENST00000541478 PTH1RQ03431 593 aa24.26■■□□□ 1.47
OTUB1-210ENST00000541478 CCDC158Q5M9N0 1113 aa24.26■■□□□ 1.47
OTUB1-210ENST00000541478 LDHAL6AQ6ZMR3 332 aa24.26■■□□□ 1.47
OTUB1-210ENST00000541478 KBTBD3Q8NAB2 608 aa24.26■■□□□ 1.47
OTUB1-210ENST00000541478 EDC3Q96F86 508 aaKnown RBP24.26■■□□□ 1.47
OTUB1-210ENST00000541478 SPEF2Q9C093 1822 aa24.26■■□□□ 1.47
OTUB1-210ENST00000541478 KCNJ4P48050 445 aa24.26■■□□□ 1.47
OTUB1-210ENST00000541478 MAP4K1Q92918 833 aa24.26■■□□□ 1.47
OTUB1-210ENST00000541478 TMX3Q96JJ7 454 aa24.26■■□□□ 1.47
OTUB1-210ENST00000541478 UPF3BQ9BZI7 483 aaKnown RBP24.26■■□□□ 1.47
OTUB1-210ENST00000541478 PAG1Q9NWQ8 432 aa24.26■■□□□ 1.47
OTUB1-210ENST00000541478 CNTNAP4Q9C0A0 1308 aa24.26■■□□□ 1.47
OTUB1-210ENST00000541478 NHSQ6T4R5 1651 aa24.25■■□□□ 1.47
OTUB1-210ENST00000541478 IFIT1P09914 478 aaKnown RBP24.25■■□□□ 1.47
OTUB1-210ENST00000541478 MCM4P33991 863 aa24.25■■□□□ 1.47
OTUB1-210ENST00000541478 METTL24Q5JXM2 366 aa24.25■■□□□ 1.47
OTUB1-210ENST00000541478 GORABQ5T7V8 394 aa24.25■■□□□ 1.47
OTUB1-210ENST00000541478 SUSD4Q5VX71 490 aa24.25■■□□□ 1.47
OTUB1-210ENST00000541478 KCNB2Q92953 911 aa24.25■■□□□ 1.47
OTUB1-210ENST00000541478 GBP4Q96PP9 640 aa24.25■■□□□ 1.47
OTUB1-210ENST00000541478 NUCB2P80303 420 aa24.24■■□□□ 1.47
OTUB1-210ENST00000541478 RNF20Q5VTR2 975 aa24.24■■□□□ 1.47
OTUB1-210ENST00000541478 CLEC4GQ6UXB4 293 aa24.24■■□□□ 1.47
OTUB1-210ENST00000541478 GJD4Q96KN9 370 aaPredicted RBP24.24■■□□□ 1.47
OTUB1-210ENST00000541478 CNNM1Q9NRU3 951 aa24.24■■□□□ 1.47
OTUB1-210ENST00000541478 RIPOR2Q9Y4F9 1068 aa24.24■■□□□ 1.47
OTUB1-210ENST00000541478 RBM8AQ9Y5S9 174 aaKnown RBP24.24■■□□□ 1.47
OTUB1-210ENST00000541478 RGL2O15211 777 aa24.24■■□□□ 1.47
OTUB1-210ENST00000541478 NECTIN1Q15223 517 aa24.24■■□□□ 1.47
OTUB1-210ENST00000541478 PRPF40BQ6NWY9 871 aaKnown RBP24.24■■□□□ 1.47
OTUB1-210ENST00000541478 DDX46Q7L014 1031 aaKnown RBP24.24■■□□□ 1.47
OTUB1-210ENST00000541478 LINC00116Q8NCU8 138 aa24.24■■□□□ 1.47
OTUB1-210ENST00000541478 NIP7Q9Y221 180 aaKnown RBP eCLIP24.24■■□□□ 1.47
OTUB1-210ENST00000541478 ABCC12Q96J65 1359 aa24.24■■□□□ 1.47
OTUB1-210ENST00000541478 RIC1Q4ADV7 1423 aa24.23■■□□□ 1.47
OTUB1-210ENST00000541478 BCORQ6W2J9 1755 aa24.23■■□□□ 1.47
OTUB1-210ENST00000541478 DDX11L8A8MPP1 907 aa24.23■■□□□ 1.47
OTUB1-210ENST00000541478 RASEFQ8IZ41 740 aa24.23■■□□□ 1.47
OTUB1-210ENST00000541478 TM6SF1Q9BZW5 370 aa24.23■■□□□ 1.47
OTUB1-210ENST00000541478 LRRFIP1Q32MZ4 808 aaKnown RBP24.22■■□□□ 1.47
OTUB1-210ENST00000541478 TTC39AQ5SRH9 613 aa24.22■■□□□ 1.47
OTUB1-210ENST00000541478 TNPO1Q92973 898 aaKnown RBP24.22■■□□□ 1.47
OTUB1-210ENST00000541478 XAGE2Q96GT9 111 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms