RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 NEURL1BA8MQ27 555 aa21.2■□□□□ 0.98
UBC-208ENST00000540700 NTSR2O95665 410 aa21.2■□□□□ 0.98
UBC-208ENST00000540700 TRIM28Q13263 835 aaKnown RBP21.2■□□□□ 0.98
UBC-208ENST00000540700 SOGA3Q5TF21 947 aa21.2■□□□□ 0.98
UBC-208ENST00000540700 ATF7IPQ6VMQ6 1270 aa21.2■□□□□ 0.98
UBC-208ENST00000540700 MASTLQ96GX5 879 aa21.2■□□□□ 0.98
UBC-208ENST00000540700 CLEC11AQ9Y240 323 aa21.2■□□□□ 0.98
UBC-208ENST00000540700 ABCC4O15439 1325 aa21.2■□□□□ 0.98
UBC-208ENST00000540700 FER1L6Q2WGJ9 1857 aa21.2■□□□□ 0.98
UBC-208ENST00000540700 RLBP1P12271 317 aa21.19■□□□□ 0.98
UBC-208ENST00000540700 LBX1P52954 281 aa21.19■□□□□ 0.98
UBC-208ENST00000540700 SLC4A10Q6U841 1118 aa21.19■□□□□ 0.98
UBC-208ENST00000540700 SYNE4Q8N205 404 aa21.19■□□□□ 0.98
UBC-208ENST00000540700 ZKSCAN2Q63HK3 967 aa21.18■□□□□ 0.98
UBC-208ENST00000540700 CLUAP1Q96AJ1 413 aa21.18■□□□□ 0.98
UBC-208ENST00000540700 L3MBTL3Q96JM7 780 aaPredicted RBP21.18■□□□□ 0.98
UBC-208ENST00000540700 API5Q9BZZ5 524 aaKnown RBP21.18■□□□□ 0.98
UBC-208ENST00000540700 ABCC12Q96J65 1359 aa21.18■□□□□ 0.98
UBC-208ENST00000540700 DICER1Q9UPY3 1922 aaKnown RBP21.17■□□□□ 0.98
UBC-208ENST00000540700 NUTM1Q86Y26 1132 aa21.17■□□□□ 0.98
UBC-208ENST00000540700 LINS1Q8NG48 757 aa21.17■□□□□ 0.98
UBC-208ENST00000540700 JARID2Q92833 1246 aaPredicted RBP21.17■□□□□ 0.98
UBC-208ENST00000540700 ZNF277Q9NRM2 450 aaPredicted RBP21.17■□□□□ 0.98
UBC-208ENST00000540700 ZNF541Q9H0D2 1346 aa21.17■□□□□ 0.98
UBC-208ENST00000540700 SLX4Q8IY92 1834 aa21.17■□□□□ 0.98
UBC-208ENST00000540700 ITGBL1O95965 494 aaPredicted RBP21.16■□□□□ 0.98
UBC-208ENST00000540700 PARP10Q53GL7 1025 aa21.16■□□□□ 0.98
UBC-208ENST00000540700 CCDC93Q567U6 631 aa21.16■□□□□ 0.98
UBC-208ENST00000540700 C20orf194Q5TEA3 1177 aa21.16■□□□□ 0.98
UBC-208ENST00000540700 WBP1LQ9NX94 342 aa21.16■□□□□ 0.98
UBC-208ENST00000540700 IBTKQ9P2D0 1353 aaPredicted RBP21.15■□□□□ 0.98
UBC-208ENST00000540700 OLFM4Q6UX06 510 aa21.15■□□□□ 0.98
UBC-208ENST00000540700 NBPF5PQ86XG9 351 aaPredicted RBP21.15■□□□□ 0.98
UBC-208ENST00000540700 CCDC191Q8NCU4 936 aa21.15■□□□□ 0.98
UBC-208ENST00000540700 HACL1Q9UJ83 578 aa21.15■□□□□ 0.98
UBC-208ENST00000540700 IPO8O15397 1037 aaKnown RBP21.14■□□□□ 0.97
UBC-208ENST00000540700 NEXNQ0ZGT2 675 aa21.14■□□□□ 0.97
UBC-208ENST00000540700 GCKRQ14397 625 aa21.14■□□□□ 0.97
UBC-208ENST00000540700 TMEM57Q8N5G2 664 aa21.14■□□□□ 0.97
UBC-208ENST00000540700 PANK1Q8TE04 598 aa21.14■□□□□ 0.97
UBC-208ENST00000540700 C7orf43Q8WVR3 580 aa21.14■□□□□ 0.97
UBC-208ENST00000540700 UTP14AQ9BVJ6 771 aaKnown RBP21.14■□□□□ 0.97
UBC-208ENST00000540700 CWC25Q9NXE8 425 aaPredicted RBP21.14■□□□□ 0.97
UBC-208ENST00000540700 RNF123Q5XPI4 1314 aa21.13■□□□□ 0.97
UBC-208ENST00000540700 EPHX2P34913 555 aa21.13■□□□□ 0.97
UBC-208ENST00000540700 CASP7P55210 303 aa21.13■□□□□ 0.97
UBC-208ENST00000540700 RRP1P56182 461 aaKnown RBP21.13■□□□□ 0.97
UBC-208ENST00000540700 FKBP4Q02790 459 aaKnown RBP eCLIP21.13■□□□□ 0.97
UBC-208ENST00000540700 RTL5Q5HYW3 569 aaPredicted RBP21.13■□□□□ 0.97
UBC-208ENST00000540700 MAP1SQ66K74 1059 aaPredicted RBP21.13■□□□□ 0.97
UBC-208ENST00000540700 FAM89AQ96GI7 184 aa21.13■□□□□ 0.97
UBC-208ENST00000540700 SRCIN1Q9C0H9 1055 aa21.13■□□□□ 0.97
UBC-208ENST00000540700 INTS3Q68E01 1043 aaKnown RBP21.12■□□□□ 0.97
UBC-208ENST00000540700 C3orf67Q6ZVT6 689 aa21.12■□□□□ 0.97
UBC-208ENST00000540700 PPP1R42Q7Z4L9 355 aa21.12■□□□□ 0.97
UBC-208ENST00000540700 TRMT112Q9UI30 125 aaKnown RBP21.12■□□□□ 0.97
UBC-208ENST00000540700 H7C1W4 665 aa21.11■□□□□ 0.97
UBC-208ENST00000540700 ALDH1L1O75891 902 aa21.11■□□□□ 0.97
UBC-208ENST00000540700 NPR1P16066 1061 aa21.11■□□□□ 0.97
UBC-208ENST00000540700 DEFB115Q30KQ5 88 aa21.11■□□□□ 0.97
UBC-208ENST00000540700 DZIP1LQ8IYY4 767 aaKnown RBP21.11■□□□□ 0.97
UBC-208ENST00000540700 CNTROBQ8N137 903 aa21.11■□□□□ 0.97
UBC-208ENST00000540700 ZBTB38Q8NAP3 1195 aaPredicted RBP21.11■□□□□ 0.97
UBC-208ENST00000540700 ABT1Q9ULW3 272 aaKnown RBP21.11■□□□□ 0.97
UBC-208ENST00000540700 DDX60Q8IY21 1712 aaKnown RBP21.1■□□□□ 0.97
UBC-208ENST00000540700 PCCAP05165 728 aaPredicted RBP21.1■□□□□ 0.97
UBC-208ENST00000540700 HSPA8P11142 646 aaKnown RBP21.1■□□□□ 0.97
UBC-208ENST00000540700 TPTE2Q6XPS3 522 aa21.1■□□□□ 0.97
UBC-208ENST00000540700 ABHD8Q96I13 439 aa21.1■□□□□ 0.97
UBC-208ENST00000540700 NYXQ9GZU5 481 aa21.1■□□□□ 0.97
UBC-208ENST00000540700 CACNA1SQ13698 1873 aa21.09■□□□□ 0.97
UBC-208ENST00000540700 SH3TC1Q8TE82 1336 aa21.09■□□□□ 0.97
UBC-208ENST00000540700 HCLS1P14317 486 aaPredicted RBP21.09■□□□□ 0.97
UBC-208ENST00000540700 CCT4P50991 539 aaKnown RBP21.09■□□□□ 0.97
UBC-208ENST00000540700 FAM161AQ3B820 660 aa21.09■□□□□ 0.97
UBC-208ENST00000540700 USP44Q9H0E7 712 aa21.09■□□□□ 0.97
UBC-208ENST00000540700 SUPT16HQ9Y5B9 1047 aaKnown RBP21.09■□□□□ 0.97
UBC-208ENST00000540700 RASSF10A6NK89 507 aa21.08■□□□□ 0.97
UBC-208ENST00000540700 NBPF7P0C2Y1 421 aaPredicted RBP21.08■□□□□ 0.97
UBC-208ENST00000540700 UBE3BQ7Z3V4 1068 aa21.08■□□□□ 0.97
UBC-208ENST00000540700 PNMA8AQ86V59 439 aaPredicted RBP21.08■□□□□ 0.97
UBC-208ENST00000540700 UTYO14607 1347 aa21.07■□□□□ 0.96
UBC-208ENST00000540700 WDR33Q9C0J8 1336 aaKnown RBP21.07■□□□□ 0.96
UBC-208ENST00000540700 RIC1Q4ADV7 1423 aa21.07■□□□□ 0.96
UBC-208ENST00000540700 SCN4AP35499 1836 aa21.07■□□□□ 0.96
UBC-208ENST00000540700 GRM8O00222 908 aa21.07■□□□□ 0.96
UBC-208ENST00000540700 SLC10A5Q5PT55 438 aa21.07■□□□□ 0.96
UBC-208ENST00000540700 FTSJ3Q8IY81 847 aaKnown RBP21.07■□□□□ 0.96
UBC-208ENST00000540700 RTKN2Q8IZC4 609 aa21.07■□□□□ 0.96
UBC-208ENST00000540700 MEIS3Q99687 375 aa21.07■□□□□ 0.96
UBC-208ENST00000540700 CDHR2Q9BYE9 1310 aa21.06■□□□□ 0.96
UBC-208ENST00000540700 LAMB2P55268 1798 aa21.06■□□□□ 0.96
UBC-208ENST00000540700 IRS4O14654 1257 aaPredicted RBP21.06■□□□□ 0.96
UBC-208ENST00000540700 IARSP41252 1262 aaKnown RBP21.06■□□□□ 0.96
UBC-208ENST00000540700 MAP2K1Q02750 393 aaPredicted RBP21.06■□□□□ 0.96
UBC-208ENST00000540700 GRM1Q13255 1194 aa21.06■□□□□ 0.96
UBC-208ENST00000540700 EPHA10Q5JZY3 1008 aa21.06■□□□□ 0.96
UBC-208ENST00000540700 PAXIP1Q6ZW49 1069 aaPredicted RBP21.06■□□□□ 0.96
UBC-208ENST00000540700 KAZALD1Q96I82 304 aa21.06■□□□□ 0.96
UBC-208ENST00000540700 SLC34A2O95436 690 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms