RNA–Protein interactions for RNA: ENST00000539469.6

PDZRN4-203, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 1 (best) BASIC

Gene PDZRN4, Length 3,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-203ENST00000539469 NBPF15Q8N660 670 aa7.56□□□□□ -1.2
PDZRN4-203ENST00000539469 RBM42Q9BTD8 480 aaKnown RBP7.56□□□□□ -1.2
PDZRN4-203ENST00000539469 VRTNQ9H8Y1 702 aa7.56□□□□□ -1.2
PDZRN4-203ENST00000539469 PALLDQ8WX93 1383 aa7.55□□□□□ -1.2
PDZRN4-203ENST00000539469 IPO8O15397 1037 aaKnown RBP7.55□□□□□ -1.2
PDZRN4-203ENST00000539469 RBM6P78332 1123 aaKnown RBP7.55□□□□□ -1.2
PDZRN4-203ENST00000539469 DBF4Q9UBU7 674 aaPredicted RBP7.55□□□□□ -1.2
PDZRN4-203ENST00000539469 BCORQ6W2J9 1755 aa7.55□□□□□ -1.2
PDZRN4-203ENST00000539469 GNPATO15228 680 aa7.55□□□□□ -1.2
PDZRN4-203ENST00000539469 TBC1D12O60347 775 aa7.55□□□□□ -1.2
PDZRN4-203ENST00000539469 A1BGP04217 495 aa7.55□□□□□ -1.2
PDZRN4-203ENST00000539469 MNX1P50219 401 aaPredicted RBP7.55□□□□□ -1.2
PDZRN4-203ENST00000539469 FKBP5Q13451 457 aaPredicted RBP7.55□□□□□ -1.2
PDZRN4-203ENST00000539469 GLIPR1L2Q4G1C9 344 aa7.55□□□□□ -1.2
PDZRN4-203ENST00000539469 NOM1Q5C9Z4 860 aaKnown RBP7.55□□□□□ -1.2
PDZRN4-203ENST00000539469 API5Q9BZZ5 524 aaKnown RBP7.55□□□□□ -1.2
PDZRN4-203ENST00000539469 MTMR14Q8NCE2 650 aa7.54□□□□□ -1.2
PDZRN4-203ENST00000539469 DDX21Q9NR30 783 aaKnown RBP eCLIP7.54□□□□□ -1.2
PDZRN4-203ENST00000539469 EMILIN3Q9NT22 766 aa7.54□□□□□ -1.2
PDZRN4-203ENST00000539469 USTQ9Y2C2 406 aa7.54□□□□□ -1.2
PDZRN4-203ENST00000539469 NUP98P52948 1817 aa7.54□□□□□ -1.2
PDZRN4-203ENST00000539469 PDAP1Q13442 181 aaKnown RBP7.54□□□□□ -1.2
PDZRN4-203ENST00000539469 PANK2Q9BZ23 570 aa7.54□□□□□ -1.2
PDZRN4-203ENST00000539469 C4AP0C0L4 1744 aa7.54□□□□□ -1.2
PDZRN4-203ENST00000539469 C4BP0C0L5 1744 aa7.54□□□□□ -1.2
PDZRN4-203ENST00000539469 KCNQ4P56696 695 aa7.54□□□□□ -1.2
PDZRN4-203ENST00000539469 AIMP1Q12904 312 aaKnown RBP7.54□□□□□ -1.2
PDZRN4-203ENST00000539469 ITPK1Q13572 414 aa7.54□□□□□ -1.2
PDZRN4-203ENST00000539469 HSP90AA2PQ14568 343 aaPredicted RBP7.54□□□□□ -1.2
PDZRN4-203ENST00000539469 C8orf34Q49A92 452 aa7.54□□□□□ -1.2
PDZRN4-203ENST00000539469 INTS3Q68E01 1043 aaKnown RBP7.54□□□□□ -1.2
PDZRN4-203ENST00000539469 KRT27Q7Z3Y8 459 aa7.54□□□□□ -1.2
PDZRN4-203ENST00000539469 TUBGCP6Q96RT7 1819 aa7.53□□□□□ -1.2
PDZRN4-203ENST00000539469 CLSTN1O94985 981 aa7.53□□□□□ -1.2
PDZRN4-203ENST00000539469 TAGLNQ01995 201 aaKnown RBP7.53□□□□□ -1.2
PDZRN4-203ENST00000539469 SLC4A10Q6U841 1118 aa7.53□□□□□ -1.2
PDZRN4-203ENST00000539469 XAGE3Q8WTP9 111 aa7.53□□□□□ -1.2
PDZRN4-203ENST00000539469 PCDHB15Q9Y5E8 787 aa7.53□□□□□ -1.2
PDZRN4-203ENST00000539469 CASZ1Q86V15 1759 aa7.53□□□□□ -1.2
PDZRN4-203ENST00000539469 PI4KAP2A4QPH2 592 aa7.53□□□□□ -1.2
PDZRN4-203ENST00000539469 ZBTB7BO15156 539 aaPredicted RBP7.53□□□□□ -1.2
PDZRN4-203ENST00000539469 CYP19A1P11511 503 aaPredicted RBP7.53□□□□□ -1.2
PDZRN4-203ENST00000539469 FAM161AQ3B820 660 aa7.53□□□□□ -1.2
PDZRN4-203ENST00000539469 PI4KAP1Q8N8J0 262 aa7.53□□□□□ -1.2
PDZRN4-203ENST00000539469 BEGAINQ9BUH8 593 aa7.53□□□□□ -1.2
PDZRN4-203ENST00000539469 HYPKQ9NX55 129 aa7.53□□□□□ -1.2
PDZRN4-203ENST00000539469 SCN7AQ01118 1682 aa7.53□□□□□ -1.2
PDZRN4-203ENST00000539469 LOC102724428A0A0B4J2F2 783 aa7.52□□□□□ -1.21
PDZRN4-203ENST00000539469 RXRBP28702 533 aa7.52□□□□□ -1.21
PDZRN4-203ENST00000539469 SIK1P57059 783 aa7.52□□□□□ -1.21
PDZRN4-203ENST00000539469 MDM2Q00987 491 aaPredicted RBP7.52□□□□□ -1.21
PDZRN4-203ENST00000539469 CC2D2BQ6DHV5 1058 aa7.52□□□□□ -1.21
PDZRN4-203ENST00000539469 COPS6Q7L5N1 327 aa7.52□□□□□ -1.21
PDZRN4-203ENST00000539469 ZBTB40Q9NUA8 1239 aa7.52□□□□□ -1.21
PDZRN4-203ENST00000539469 DDX19BQ9UMR2 479 aa7.52□□□□□ -1.21
PDZRN4-203ENST00000539469 ATP10DQ9P241 1426 aa7.52□□□□□ -1.21
PDZRN4-203ENST00000539469 UBR3Q6ZT12 1888 aa7.52□□□□□ -1.21
PDZRN4-203ENST00000539469 TTLL7Q6ZT98 887 aa7.52□□□□□ -1.21
PDZRN4-203ENST00000539469 MICAL1Q8TDZ2 1067 aa7.52□□□□□ -1.21
PDZRN4-203ENST00000539469 ZBTB1Q9Y2K1 713 aa7.52□□□□□ -1.21
PDZRN4-203ENST00000539469 MAP3K2Q9Y2U5 619 aa7.52□□□□□ -1.21
PDZRN4-203ENST00000539469 ERBB4Q15303 1308 aa7.52□□□□□ -1.21
PDZRN4-203ENST00000539469 KDM2BQ8NHM5 1336 aa7.52□□□□□ -1.21
PDZRN4-203ENST00000539469 SEC24BO95487 1268 aa7.52□□□□□ -1.21
PDZRN4-203ENST00000539469 ATP6V1AP38606 617 aa7.52□□□□□ -1.21
PDZRN4-203ENST00000539469 RFC5P40937 340 aa7.52□□□□□ -1.21
PDZRN4-203ENST00000539469 MEIS3Q99687 375 aa7.52□□□□□ -1.21
PDZRN4-203ENST00000539469 RGPD3A6NKT7 1758 aaPredicted RBP7.51□□□□□ -1.21
PDZRN4-203ENST00000539469 RGPD4Q7Z3J3 1758 aa7.51□□□□□ -1.21
PDZRN4-203ENST00000539469 IGHDP01880 384 aa7.51□□□□□ -1.21
PDZRN4-203ENST00000539469 HSP90AA1P07900 732 aaKnown RBP7.51□□□□□ -1.21
PDZRN4-203ENST00000539469 PSEN1P49768 467 aa7.51□□□□□ -1.21
PDZRN4-203ENST00000539469 BEND3Q5T5X7 828 aa7.51□□□□□ -1.21
PDZRN4-203ENST00000539469 LINC00116Q8NCU8 138 aa7.51□□□□□ -1.21
PDZRN4-203ENST00000539469 DNAAF4Q8WXU2 420 aa7.51□□□□□ -1.21
PDZRN4-203ENST00000539469 TRIM37O94972 964 aa7.51□□□□□ -1.21
PDZRN4-203ENST00000539469 INTS5Q6P9B9 1019 aaKnown RBP7.51□□□□□ -1.21
PDZRN4-203ENST00000539469 KSR2Q6VAB6 950 aa7.51□□□□□ -1.21
PDZRN4-203ENST00000539469 LOC102724159A0A0B4J2E5 919 aa7.5□□□□□ -1.21
PDZRN4-203ENST00000539469 TMEM88BA6NKF7 163 aa7.5□□□□□ -1.21
PDZRN4-203ENST00000539469 RAB11FIP3O75154 756 aa7.5□□□□□ -1.21
PDZRN4-203ENST00000539469 CRKLP46109 303 aaKnown RBP7.5□□□□□ -1.21
PDZRN4-203ENST00000539469 PWP2Q15269 919 aaKnown RBP7.5□□□□□ -1.21
PDZRN4-203ENST00000539469 CWF19L2Q2TBE0 894 aaKnown RBP7.5□□□□□ -1.21
PDZRN4-203ENST00000539469 NAALADL2Q58DX5 795 aa7.5□□□□□ -1.21
PDZRN4-203ENST00000539469 DNAJC2Q99543 621 aaKnown RBP7.5□□□□□ -1.21
PDZRN4-203ENST00000539469 IGKV5-2P06315 115 aa7.5□□□□□ -1.21
PDZRN4-203ENST00000539469 NCLP19338 710 aaKnown RBP7.5□□□□□ -1.21
PDZRN4-203ENST00000539469 LMOD1P29536 600 aaPredicted RBP7.5□□□□□ -1.21
PDZRN4-203ENST00000539469 CCT4P50991 539 aaKnown RBP7.5□□□□□ -1.21
PDZRN4-203ENST00000539469 FAM196AQ6ZSG2 479 aa7.5□□□□□ -1.21
PDZRN4-203ENST00000539469 SMIM5Q71RC9 77 aa7.5□□□□□ -1.21
PDZRN4-203ENST00000539469 SMARCC1Q92922 1105 aaPredicted RBP7.5□□□□□ -1.21
PDZRN4-203ENST00000539469 VTI1AQ96AJ9 217 aa7.5□□□□□ -1.21
PDZRN4-203ENST00000539469 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.5□□□□□ -1.21
PDZRN4-203ENST00000539469 STARD3NLO95772 234 aa7.49□□□□□ -1.21
PDZRN4-203ENST00000539469 DNAJC14Q6Y2X3 702 aaPredicted RBP7.49□□□□□ -1.21
PDZRN4-203ENST00000539469 AMIGO3Q86WK7 504 aa7.49□□□□□ -1.21
PDZRN4-203ENST00000539469 TEX13AQ9BXU3 409 aaPredicted RBP7.49□□□□□ -1.21
PDZRN4-203ENST00000539469 TSPYL2Q9H2G4 693 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms