RNA–Protein interactions for RNA: ENST00000539212.5

PDCD2-207, Transcript of programmed cell death 2, humanhuman

TSL 3

Gene PDCD2, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-207ENST00000539212 HOXB7P09629 217 aa22.45■■□□□ 1.18
PDCD2-207ENST00000539212 SP8Q8IXZ3 490 aa22.45■■□□□ 1.18
PDCD2-207ENST00000539212 FAM89AQ96GI7 184 aa22.45■■□□□ 1.18
PDCD2-207ENST00000539212 ISCA1Q9BUE6 129 aa22.45■■□□□ 1.18
PDCD2-207ENST00000539212 RTFDC1Q9BY42 306 aaPredicted RBP22.45■■□□□ 1.18
PDCD2-207ENST00000539212 DBF4Q9UBU7 674 aaPredicted RBP22.45■■□□□ 1.18
PDCD2-207ENST00000539212 APAF1O14727 1248 aa22.44■■□□□ 1.18
PDCD2-207ENST00000539212 BBOX1O75936 387 aa22.44■■□□□ 1.18
PDCD2-207ENST00000539212 CXCL9Q07325 125 aa22.44■■□□□ 1.18
PDCD2-207ENST00000539212 ANKRD13DQ6ZTN6 518 aa22.44■■□□□ 1.18
PDCD2-207ENST00000539212 MPNDQ8N594 471 aa22.44■■□□□ 1.18
PDCD2-207ENST00000539212 FOXN1O15353 648 aa22.43■■□□□ 1.18
PDCD2-207ENST00000539212 ZNRF3Q9ULT6 936 aa22.43■■□□□ 1.18
PDCD2-207ENST00000539212 TRAF5O00463 557 aa22.42■■□□□ 1.18
PDCD2-207ENST00000539212 ELL2O00472 640 aaPredicted RBP22.42■■□□□ 1.18
PDCD2-207ENST00000539212 ZNF853P0CG23 659 aa22.42■■□□□ 1.18
PDCD2-207ENST00000539212 SUPT20HQ8NEM7 779 aa22.42■■□□□ 1.18
PDCD2-207ENST00000539212 CELF1Q92879 486 aaKnown RBP22.42■■□□□ 1.18
PDCD2-207ENST00000539212 GPRC5DQ9NZD1 345 aa22.42■■□□□ 1.18
PDCD2-207ENST00000539212 RAD17O75943 681 aa22.41■■□□□ 1.18
PDCD2-207ENST00000539212 GMPSP49915 693 aaPredicted RBP22.41■■□□□ 1.18
PDCD2-207ENST00000539212 KIAA2012Q0VF49 1180 aa22.41■■□□□ 1.18
PDCD2-207ENST00000539212 PHAXQ9H814 394 aaKnown RBP22.41■■□□□ 1.18
PDCD2-207ENST00000539212 HYPKQ9NX55 129 aa22.41■■□□□ 1.18
PDCD2-207ENST00000539212 ABT1Q9ULW3 272 aaKnown RBP22.41■■□□□ 1.18
PDCD2-207ENST00000539212 THSD7BQ9C0I4 1608 aa22.41■■□□□ 1.18
PDCD2-207ENST00000539212 SPEF2Q9C093 1822 aa22.41■■□□□ 1.18
PDCD2-207ENST00000539212 USP50Q70EL3 339 aaPredicted RBP22.4■■□□□ 1.18
PDCD2-207ENST00000539212 SHTN1A0MZ66 631 aa22.39■■□□□ 1.17
PDCD2-207ENST00000539212 RASSF10A6NK89 507 aa22.39■■□□□ 1.17
PDCD2-207ENST00000539212 YDJCA8MPS7 323 aa22.39■■□□□ 1.17
PDCD2-207ENST00000539212 VPS33BQ9H267 617 aa22.39■■□□□ 1.17
PDCD2-207ENST00000539212 IFT57Q9NWB7 429 aa22.39■■□□□ 1.17
PDCD2-207ENST00000539212 DEFB115Q30KQ5 88 aa22.38■■□□□ 1.17
PDCD2-207ENST00000539212 CIAPIN1Q6FI81 312 aa22.38■■□□□ 1.17
PDCD2-207ENST00000539212 ADARB2Q9NS39 739 aaKnown RBP22.38■■□□□ 1.17
PDCD2-207ENST00000539212 SCN9AQ15858 1988 aa22.38■■□□□ 1.17
PDCD2-207ENST00000539212 SF3B3Q15393 1217 aaKnown RBP22.37■■□□□ 1.17
PDCD2-207ENST00000539212 CCDC184Q52MB2 194 aa22.37■■□□□ 1.17
PDCD2-207ENST00000539212 RIC3Q7Z5B4 369 aa22.37■■□□□ 1.17
PDCD2-207ENST00000539212 C8orf58Q8NAV2 365 aa22.37■■□□□ 1.17
PDCD2-207ENST00000539212 GPR101Q96P66 508 aaPredicted RBP22.37■■□□□ 1.17
PDCD2-207ENST00000539212 IRS4O14654 1257 aaPredicted RBP22.36■■□□□ 1.17
PDCD2-207ENST00000539212 GNAI1P63096 354 aa22.36■■□□□ 1.17
PDCD2-207ENST00000539212 GPSM2P81274 684 aa22.36■■□□□ 1.17
PDCD2-207ENST00000539212 GOLGA2Q08379 1002 aa22.36■■□□□ 1.17
PDCD2-207ENST00000539212 JARID2Q92833 1246 aaPredicted RBP22.36■■□□□ 1.17
PDCD2-207ENST00000539212 MYD88Q99836 296 aa22.36■■□□□ 1.17
PDCD2-207ENST00000539212 WDR33Q9C0J8 1336 aaKnown RBP22.35■■□□□ 1.17
PDCD2-207ENST00000539212 CST9Q5W186 159 aa22.35■■□□□ 1.17
PDCD2-207ENST00000539212 TRPM4Q8TD43 1214 aa22.35■■□□□ 1.17
PDCD2-207ENST00000539212 BCL2L13Q9BXK5 485 aa22.35■■□□□ 1.17
PDCD2-207ENST00000539212 DBNDD1Q9H9R9 158 aa22.35■■□□□ 1.17
PDCD2-207ENST00000539212 NSFL1CQ9UNZ2 370 aaKnown RBP22.35■■□□□ 1.17
PDCD2-207ENST00000539212 MYH3P11055 1940 aa22.34■■□□□ 1.17
PDCD2-207ENST00000539212 RIMBP2O15034 1052 aa22.34■■□□□ 1.17
PDCD2-207ENST00000539212 HIRAP54198 1017 aaPredicted RBP22.34■■□□□ 1.17
PDCD2-207ENST00000539212 GRM1Q13255 1194 aa22.34■■□□□ 1.17
PDCD2-207ENST00000539212 TMC4Q7Z404 712 aa22.34■■□□□ 1.17
PDCD2-207ENST00000539212 GLIS2Q9BZE0 524 aaPredicted RBP22.34■■□□□ 1.17
PDCD2-207ENST00000539212 POLLQ9UGP5 575 aa22.34■■□□□ 1.17
PDCD2-207ENST00000539212 ZBTB12Q9Y330 459 aaPredicted RBP22.34■■□□□ 1.17
PDCD2-207ENST00000539212 POLR2AP24928 1970 aaKnown RBP22.33■■□□□ 1.17
PDCD2-207ENST00000539212 TRIM28Q13263 835 aaKnown RBP22.33■■□□□ 1.17
PDCD2-207ENST00000539212 PAXIP1Q6ZW49 1069 aaPredicted RBP22.33■■□□□ 1.17
PDCD2-207ENST00000539212 TSPYL6Q8N831 410 aa22.33■■□□□ 1.17
PDCD2-207ENST00000539212 AIDAQ96BJ3 306 aa22.33■■□□□ 1.17
PDCD2-207ENST00000539212 SEC31BQ9NQW1 1179 aa22.33■■□□□ 1.17
PDCD2-207ENST00000539212 WBP1LQ9NX94 342 aa22.33■■□□□ 1.17
PDCD2-207ENST00000539212 TNIP1Q15025 636 aa22.32■■□□□ 1.16
PDCD2-207ENST00000539212 TSR2Q969E8 191 aaKnown RBP22.32■■□□□ 1.16
PDCD2-207ENST00000539212 CCDC85AQ96PX6 553 aaPredicted RBP22.32■■□□□ 1.16
PDCD2-207ENST00000539212 PSME4Q14997 1843 aa22.31■■□□□ 1.16
PDCD2-207ENST00000539212 C6orf229H3BNL8 230 aa22.31■■□□□ 1.16
PDCD2-207ENST00000539212 CALD1Q05682 793 aaKnown RBP22.31■■□□□ 1.16
PDCD2-207ENST00000539212 WASHC4Q2M389 1173 aa22.31■■□□□ 1.16
PDCD2-207ENST00000539212 CYP4F22Q6NT55 531 aa22.31■■□□□ 1.16
PDCD2-207ENST00000539212 ZBTB38Q8NAP3 1195 aaPredicted RBP22.31■■□□□ 1.16
PDCD2-207ENST00000539212 KCNQ5Q9NR82 932 aa22.31■■□□□ 1.16
PDCD2-207ENST00000539212 CDHR2Q9BYE9 1310 aa22.31■■□□□ 1.16
PDCD2-207ENST00000539212 RTL9Q8NET4 1388 aa22.3■■□□□ 1.16
PDCD2-207ENST00000539212 PSMD14O00487 310 aa22.3■■□□□ 1.16
PDCD2-207ENST00000539212 DOK7Q18PE1 504 aa22.3■■□□□ 1.16
PDCD2-207ENST00000539212 MICALL2Q8IY33 904 aa22.3■■□□□ 1.16
PDCD2-207ENST00000539212 CAPNS2Q96L46 248 aa22.3■■□□□ 1.16
PDCD2-207ENST00000539212 CNOT7Q9UIV1 285 aaKnown RBP22.3■■□□□ 1.16
PDCD2-207ENST00000539212 CTCFP49711 727 aaPredicted RBP22.29■■□□□ 1.16
PDCD2-207ENST00000539212 LBX1P52954 281 aa22.29■■□□□ 1.16
PDCD2-207ENST00000539212 DLK2Q6UY11 383 aa22.29■■□□□ 1.16
PDCD2-207ENST00000539212 TBC1D16Q8TBP0 767 aa22.29■■□□□ 1.16
PDCD2-207ENST00000539212 ECE2O60344 883 aa22.28■■□□□ 1.16
PDCD2-207ENST00000539212 CELF2O95319 508 aaKnown RBP22.28■■□□□ 1.16
PDCD2-207ENST00000539212 EGFRP00533 1210 aa22.28■■□□□ 1.16
PDCD2-207ENST00000539212 RPS8P62241 208 aaKnown RBP22.28■■□□□ 1.16
PDCD2-207ENST00000539212 ZNF408Q9H9D4 720 aa22.28■■□□□ 1.16
PDCD2-207ENST00000539212 TLL2Q9Y6L7 1015 aa22.28■■□□□ 1.16
PDCD2-207ENST00000539212 HSPA8P11142 646 aaKnown RBP22.27■■□□□ 1.16
PDCD2-207ENST00000539212 SAMD7Q7Z3H4 446 aa22.27■■□□□ 1.16
PDCD2-207ENST00000539212 METTL22Q9BUU2 404 aaPredicted RBP22.27■■□□□ 1.16
PDCD2-207ENST00000539212 PRDM10Q9NQV6 1147 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms