RNA–Protein interactions for RNA: ENST00000537296.5

LDHA-215, Transcript of lactate dehydrogenase A, human

TSL 2

Gene LDHA, Length 1,511 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-215	ENST00000537296	CRAMP1	Q96RY5	1269 aa		13.89	□□□□□ -0.19
LDHA-215	ENST00000537296	TAOK3	Q9H2K8	898 aa		13.89	□□□□□ -0.19
LDHA-215	ENST00000537296	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.89	□□□□□ -0.19
LDHA-215	ENST00000537296		F6X3S4	739 aa		13.88	□□□□□ -0.19
LDHA-215	ENST00000537296	IRS4	O14654	1257 aa	Predicted RBP	13.88	□□□□□ -0.19
LDHA-215	ENST00000537296	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.88	□□□□□ -0.19
LDHA-215	ENST00000537296	CCDC191	Q8NCU4	936 aa		13.88	□□□□□ -0.19
LDHA-215	ENST00000537296	CWC25	Q9NXE8	425 aa	Predicted RBP	13.88	□□□□□ -0.19
LDHA-215	ENST00000537296	PPEF1	O14829	653 aa	Predicted RBP	13.87	□□□□□ -0.19
LDHA-215	ENST00000537296	NMRK2	Q9NPI5	230 aa		13.87	□□□□□ -0.19
LDHA-215	ENST00000537296	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.87	□□□□□ -0.19
LDHA-215	ENST00000537296	LTBP3	Q9NS15	1303 aa		13.87	□□□□□ -0.19
LDHA-215	ENST00000537296	COL4A5	P29400	1685 aa		13.87	□□□□□ -0.19
LDHA-215	ENST00000537296	MYH3	P11055	1940 aa		13.87	□□□□□ -0.19
LDHA-215	ENST00000537296	NEURL1B	A8MQ27	555 aa		13.86	□□□□□ -0.19
LDHA-215	ENST00000537296	PCCA	P05165	728 aa	Predicted RBP	13.86	□□□□□ -0.19
LDHA-215	ENST00000537296	SOGA3	Q5TF21	947 aa		13.86	□□□□□ -0.19
LDHA-215	ENST00000537296	TRMT2A	Q8IZ69	625 aa	Known RBP	13.86	□□□□□ -0.19
LDHA-215	ENST00000537296	LRRC37A	A6NMS7	1700 aa		13.85	□□□□□ -0.19
LDHA-215	ENST00000537296	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
LDHA-215	ENST00000537296	DNAAF4	Q8WXU2	420 aa		13.85	□□□□□ -0.19
LDHA-215	ENST00000537296	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.85	□□□□□ -0.19
LDHA-215	ENST00000537296	BCL2L13	Q9BXK5	485 aa		13.85	□□□□□ -0.19
LDHA-215	ENST00000537296	SPEF2	Q9C093	1822 aa		13.85	□□□□□ -0.19
LDHA-215	ENST00000537296	KIF3C	O14782	793 aa		13.85	□□□□□ -0.19
LDHA-215	ENST00000537296	NEXN	Q0ZGT2	675 aa		13.85	□□□□□ -0.19
LDHA-215	ENST00000537296	SF3B3	Q15393	1217 aa	Known RBP	13.85	□□□□□ -0.19
LDHA-215	ENST00000537296	RTKN2	Q8IZC4	609 aa		13.85	□□□□□ -0.19
LDHA-215	ENST00000537296	CELF1	Q92879	486 aa	Known RBP	13.85	□□□□□ -0.19
LDHA-215	ENST00000537296	GRAP	Q13588	217 aa		13.84	□□□□□ -0.19
LDHA-215	ENST00000537296	DDX46	Q7L014	1031 aa	Known RBP	13.84	□□□□□ -0.19
LDHA-215	ENST00000537296	MRPL50	Q8N5N7	158 aa	Known RBP	13.84	□□□□□ -0.19
LDHA-215	ENST00000537296	GRAPL	Q8TC17	118 aa	Predicted RBP	13.84	□□□□□ -0.19
LDHA-215	ENST00000537296	SSH1	Q8WYL5	1049 aa		13.84	□□□□□ -0.19
LDHA-215	ENST00000537296	SEC31B	Q9NQW1	1179 aa		13.84	□□□□□ -0.19
LDHA-215	ENST00000537296	ATP6V0A2	Q9Y487	856 aa		13.84	□□□□□ -0.19
LDHA-215	ENST00000537296	GCKR	Q14397	625 aa		13.83	□□□□□ -0.2
LDHA-215	ENST00000537296	UBE3B	Q7Z3V4	1068 aa		13.83	□□□□□ -0.2
LDHA-215	ENST00000537296	DUOX1	Q9NRD9	1551 aa		13.83	□□□□□ -0.2
LDHA-215	ENST00000537296	CDHR2	Q9BYE9	1310 aa		13.82	□□□□□ -0.2
LDHA-215	ENST00000537296		H7C1W4	665 aa		13.82	□□□□□ -0.2
LDHA-215	ENST00000537296	PDE8A	O60658	829 aa		13.82	□□□□□ -0.2
LDHA-215	ENST00000537296	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
LDHA-215	ENST00000537296	BEND3	Q5T5X7	828 aa		13.82	□□□□□ -0.2
LDHA-215	ENST00000537296	LINS1	Q8NG48	757 aa		13.82	□□□□□ -0.2
LDHA-215	ENST00000537296	PSMD1	Q99460	953 aa		13.82	□□□□□ -0.2
LDHA-215	ENST00000537296	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.81	□□□□□ -0.2
LDHA-215	ENST00000537296	BBOX1	O75936	387 aa		13.81	□□□□□ -0.2
LDHA-215	ENST00000537296	IARS	P41252	1262 aa	Known RBP	13.81	□□□□□ -0.2
LDHA-215	ENST00000537296	CASP7	P55210	303 aa		13.81	□□□□□ -0.2
LDHA-215	ENST00000537296	RRAGC	Q9HB90	399 aa		13.81	□□□□□ -0.2
LDHA-215	ENST00000537296	LTBP1	Q14766	1721 aa		13.81	□□□□□ -0.2
LDHA-215	ENST00000537296	ZNF541	Q9H0D2	1346 aa		13.81	□□□□□ -0.2
LDHA-215	ENST00000537296	GLTPD2	A6NH11	291 aa		13.8	□□□□□ -0.2
LDHA-215	ENST00000537296	CTSW	P56202	376 aa		13.8	□□□□□ -0.2
LDHA-215	ENST00000537296	C1QTNF8	P60827	252 aa		13.8	□□□□□ -0.2
LDHA-215	ENST00000537296	CC2D2B	Q6DHV5	1058 aa		13.8	□□□□□ -0.2
LDHA-215	ENST00000537296	SP8	Q8IXZ3	490 aa		13.8	□□□□□ -0.2
LDHA-215	ENST00000537296	WDR90	Q96KV7	1748 aa		13.8	□□□□□ -0.2
LDHA-215	ENST00000537296	KDM2B	Q8NHM5	1336 aa		13.8	□□□□□ -0.2
LDHA-215	ENST00000537296	DDN	O94850	711 aa	Predicted RBP	13.8	□□□□□ -0.2
LDHA-215	ENST00000537296	SLC4A10	Q6U841	1118 aa		13.8	□□□□□ -0.2
LDHA-215	ENST00000537296	TTLL11	Q8NHH1	800 aa		13.8	□□□□□ -0.2
LDHA-215	ENST00000537296	POTEC	B2RU33	542 aa		13.79	□□□□□ -0.2
LDHA-215	ENST00000537296	AOC3	Q16853	763 aa		13.79	□□□□□ -0.2
LDHA-215	ENST00000537296	REM2	Q8IYK8	340 aa	Predicted RBP	13.79	□□□□□ -0.2
LDHA-215	ENST00000537296	GREM2	Q9H772	168 aa		13.79	□□□□□ -0.2
LDHA-215	ENST00000537296	RPS8	P62241	208 aa	Known RBP	13.78	□□□□□ -0.2
LDHA-215	ENST00000537296	GPSM2	P81274	684 aa		13.78	□□□□□ -0.2
LDHA-215	ENST00000537296	CCDC152	Q4G0S7	254 aa		13.78	□□□□□ -0.2
LDHA-215	ENST00000537296	DPP8	Q6V1X1	898 aa	Predicted RBP	13.78	□□□□□ -0.2
LDHA-215	ENST00000537296	MPND	Q8N594	471 aa		13.78	□□□□□ -0.2
LDHA-215	ENST00000537296	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.78	□□□□□ -0.2
LDHA-215	ENST00000537296	SMC4	Q9NTJ3	1288 aa		13.78	□□□□□ -0.2
LDHA-215	ENST00000537296	LARGE2	Q8N3Y3	721 aa		13.77	□□□□□ -0.21
LDHA-215	ENST00000537296	GPR101	Q96P66	508 aa	Predicted RBP	13.77	□□□□□ -0.21
LDHA-215	ENST00000537296	FZD9	O00144	591 aa		13.76	□□□□□ -0.21
LDHA-215	ENST00000537296	PPIP5K2	O43314	1243 aa		13.76	□□□□□ -0.21
LDHA-215	ENST00000537296	HSP90B1	P14625	803 aa	Known RBP	13.76	□□□□□ -0.21
LDHA-215	ENST00000537296	ALDH1L2	Q3SY69	923 aa		13.76	□□□□□ -0.21
LDHA-215	ENST00000537296	GRIPAP1	Q4V328	841 aa		13.76	□□□□□ -0.21
LDHA-215	ENST00000537296	EPHA10	Q5JZY3	1008 aa		13.76	□□□□□ -0.21
LDHA-215	ENST00000537296	DPY19L2	Q6NUT2	758 aa		13.76	□□□□□ -0.21
LDHA-215	ENST00000537296	PLA2G12B	Q9BX93	195 aa		13.76	□□□□□ -0.21
LDHA-215	ENST00000537296	TMX4	Q9H1E5	349 aa	Predicted RBP	13.76	□□□□□ -0.21
LDHA-215	ENST00000537296	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.76	□□□□□ -0.21
LDHA-215	ENST00000537296	CEP350	Q5VT06	3117 aa		13.76	□□□□□ -0.21
LDHA-215	ENST00000537296	WTIP	A6NIX2	430 aa	Predicted RBP	13.75	□□□□□ -0.21
LDHA-215	ENST00000537296	GRM8	O00222	908 aa		13.75	□□□□□ -0.21
LDHA-215	ENST00000537296	FOXO4	P98177	505 aa		13.75	□□□□□ -0.21
LDHA-215	ENST00000537296	FAM161A	Q3B820	660 aa		13.75	□□□□□ -0.21
LDHA-215	ENST00000537296	TMC4	Q7Z404	712 aa		13.75	□□□□□ -0.21
LDHA-215	ENST00000537296	SRCIN1	Q9C0H9	1055 aa		13.75	□□□□□ -0.21
LDHA-215	ENST00000537296	POLL	Q9UGP5	575 aa		13.75	□□□□□ -0.21
LDHA-215	ENST00000537296	PTPRC	P08575	1304 aa		13.75	□□□□□ -0.21
LDHA-215	ENST00000537296	CSF1R	P07333	972 aa		13.74	□□□□□ -0.21
LDHA-215	ENST00000537296	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.74	□□□□□ -0.21
LDHA-215	ENST00000537296	RARS	P54136	660 aa	Known RBP	13.74	□□□□□ -0.21
LDHA-215	ENST00000537296	ANKRD18A	Q8IVF6	992 aa		13.74	□□□□□ -0.21
LDHA-215	ENST00000537296	SPDYE1	Q8NFV5	336 aa	Predicted RBP	13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms