RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 FANCIQ9NVI1 1328 aa11.41□□□□□ -0.58
CHD4-204ENST00000535810 DICER1Q9UPY3 1922 aaKnown RBP11.41□□□□□ -0.58
CHD4-204ENST00000535810 GLTPD2A6NH11 291 aa11.41□□□□□ -0.58
CHD4-204ENST00000535810 ATP5J2-PTCD1G3V325 749 aa11.41□□□□□ -0.58
CHD4-204ENST00000535810 FKBP4Q02790 459 aaKnown RBP eCLIP11.41□□□□□ -0.58
CHD4-204ENST00000535810 GOLGA2Q08379 1002 aa11.41□□□□□ -0.58
CHD4-204ENST00000535810 CCDC30Q5VVM6 783 aa11.41□□□□□ -0.58
CHD4-204ENST00000535810 SLC51AQ86UW1 340 aa11.41□□□□□ -0.58
CHD4-204ENST00000535810 RTKN2Q8IZC4 609 aa11.41□□□□□ -0.58
CHD4-204ENST00000535810 FAM9BQ8IZU0 186 aa11.41□□□□□ -0.58
CHD4-204ENST00000535810 SYNE4Q8N205 404 aa11.41□□□□□ -0.58
CHD4-204ENST00000535810 ZNF428Q96B54 188 aa11.41□□□□□ -0.58
CHD4-204ENST00000535810 RBM17Q96I25 401 aaKnown RBP11.41□□□□□ -0.58
CHD4-204ENST00000535810 CRAMP1Q96RY5 1269 aa11.41□□□□□ -0.58
CHD4-204ENST00000535810 SALL2Q9Y467 1007 aaPredicted RBP11.41□□□□□ -0.58
CHD4-204ENST00000535810 PPEF1O14829 653 aaPredicted RBP11.4□□□□□ -0.58
CHD4-204ENST00000535810 HCLS1P14317 486 aaPredicted RBP11.4□□□□□ -0.58
CHD4-204ENST00000535810 TRIM28Q13263 835 aaKnown RBP11.4□□□□□ -0.58
CHD4-204ENST00000535810 CHMP4AQ9BY43 222 aa11.4□□□□□ -0.58
CHD4-204ENST00000535810 ZNF277Q9NRM2 450 aaPredicted RBP11.4□□□□□ -0.58
CHD4-204ENST00000535810 ABCC4O15439 1325 aa11.39□□□□□ -0.59
CHD4-204ENST00000535810 LAMB2P55268 1798 aa11.39□□□□□ -0.59
CHD4-204ENST00000535810 TWISTNBQ3B726 338 aaPredicted RBP11.39□□□□□ -0.59
CHD4-204ENST00000535810 CC2D2BQ6DHV5 1058 aa11.39□□□□□ -0.59
CHD4-204ENST00000535810 RIC3Q7Z5B4 369 aa11.39□□□□□ -0.59
CHD4-204ENST00000535810 WDR63Q8IWG1 891 aa11.39□□□□□ -0.59
CHD4-204ENST00000535810 PSMD1Q99460 953 aa11.39□□□□□ -0.59
CHD4-204ENST00000535810 DDX60Q8IY21 1712 aaKnown RBP11.38□□□□□ -0.59
CHD4-204ENST00000535810 GSE1Q14687 1217 aa11.38□□□□□ -0.59
CHD4-204ENST00000535810 FAM89AQ96GI7 184 aa11.38□□□□□ -0.59
CHD4-204ENST00000535810 TCERG1O14776 1098 aaKnown RBP11.37□□□□□ -0.59
CHD4-204ENST00000535810 DDX58O95786 925 aaKnown RBP11.37□□□□□ -0.59
CHD4-204ENST00000535810 IARSP41252 1262 aaKnown RBP11.37□□□□□ -0.59
CHD4-204ENST00000535810 GRIPAP1Q4V328 841 aa11.37□□□□□ -0.59
CHD4-204ENST00000535810 DPY19L2Q6NUT2 758 aa11.37□□□□□ -0.59
CHD4-204ENST00000535810 RASEFQ8IZ41 740 aa11.37□□□□□ -0.59
CHD4-204ENST00000535810 MYD88Q99836 296 aa11.37□□□□□ -0.59
CHD4-204ENST00000535810 METTL22Q9BUU2 404 aaPredicted RBP11.37□□□□□ -0.59
CHD4-204ENST00000535810 STK31Q9BXU1 1019 aa11.37□□□□□ -0.59
CHD4-204ENST00000535810 PRDM10Q9NQV6 1147 aa11.37□□□□□ -0.59
CHD4-204ENST00000535810 ATP6V0A2Q9Y487 856 aa11.37□□□□□ -0.59
CHD4-204ENST00000535810 COL4A5P29400 1685 aa11.36□□□□□ -0.59
CHD4-204ENST00000535810 POTECB2RU33 542 aa11.36□□□□□ -0.59
CHD4-204ENST00000535810 VEGFAP15692 232 aaPredicted RBP11.36□□□□□ -0.59
CHD4-204ENST00000535810 RTL5Q5HYW3 569 aaPredicted RBP11.36□□□□□ -0.59
CHD4-204ENST00000535810 DDX46Q7L014 1031 aaKnown RBP11.36□□□□□ -0.59
CHD4-204ENST00000535810 ZBTB38Q8NAP3 1195 aaPredicted RBP11.36□□□□□ -0.59
CHD4-204ENST00000535810 MAP3K2Q9Y2U5 619 aa11.36□□□□□ -0.59
CHD4-204ENST00000535810 ZNF521Q96K83 1311 aa11.35□□□□□ -0.59
CHD4-204ENST00000535810 ZNF541Q9H0D2 1346 aa11.35□□□□□ -0.59
CHD4-204ENST00000535810 PI4KAP2A4QPH2 592 aa11.35□□□□□ -0.59
CHD4-204ENST00000535810 IRS4O14654 1257 aaPredicted RBP11.35□□□□□ -0.59
CHD4-204ENST00000535810 BBOX1O75936 387 aa11.35□□□□□ -0.59
CHD4-204ENST00000535810 DDNO94850 711 aaPredicted RBP11.35□□□□□ -0.59
CHD4-204ENST00000535810 EXOSC9Q06265 439 aaKnown RBP11.35□□□□□ -0.59
CHD4-204ENST00000535810 GRAPQ13588 217 aa11.35□□□□□ -0.59
CHD4-204ENST00000535810 SF3B3Q15393 1217 aaKnown RBP11.35□□□□□ -0.59
CHD4-204ENST00000535810 KSR2Q6VAB6 950 aa11.35□□□□□ -0.59
CHD4-204ENST00000535810 G2E3Q7L622 706 aa11.35□□□□□ -0.59
CHD4-204ENST00000535810 PI4KAP1Q8N8J0 262 aa11.35□□□□□ -0.59
CHD4-204ENST00000535810 CCDC191Q8NCU4 936 aa11.35□□□□□ -0.59
CHD4-204ENST00000535810 GRAPLQ8TC17 118 aaPredicted RBP11.35□□□□□ -0.59
CHD4-204ENST00000535810 FAM212AQ96EL1 285 aa11.35□□□□□ -0.59
CHD4-204ENST00000535810 CWC25Q9NXE8 425 aaPredicted RBP11.35□□□□□ -0.59
CHD4-204ENST00000535810 COL4A1P02462 1669 aa11.34□□□□□ -0.59
CHD4-204ENST00000535810 FZD9O00144 591 aa11.34□□□□□ -0.59
CHD4-204ENST00000535810 VAMP4O75379 141 aa11.34□□□□□ -0.59
CHD4-204ENST00000535810 PCCAP05165 728 aaPredicted RBP11.34□□□□□ -0.59
CHD4-204ENST00000535810 IGKV5-2P06315 115 aa11.34□□□□□ -0.59
CHD4-204ENST00000535810 SP8Q8IXZ3 490 aa11.34□□□□□ -0.59
CHD4-204ENST00000535810 L3MBTL3Q96JM7 780 aaPredicted RBP11.34□□□□□ -0.59
CHD4-204ENST00000535810 TMX4Q9H1E5 349 aaPredicted RBP11.34□□□□□ -0.59
CHD4-204ENST00000535810 MYH16Q9H6N6 1097 aa11.34□□□□□ -0.59
CHD4-204ENST00000535810 LRRC37AA6NMS7 1700 aa11.34□□□□□ -0.59
CHD4-204ENST00000535810 TAF1P21675 1872 aa11.34□□□□□ -0.59
CHD4-204ENST00000535810 PRKAR2AP13861 404 aaKnown RBP11.33□□□□□ -0.6
CHD4-204ENST00000535810 FLIIQ13045 1269 aa11.33□□□□□ -0.6
CHD4-204ENST00000535810 FAM161AQ3B820 660 aa11.33□□□□□ -0.6
CHD4-204ENST00000535810 TMC4Q7Z404 712 aa11.33□□□□□ -0.6
CHD4-204ENST00000535810 LARGE2Q8N3Y3 721 aa11.33□□□□□ -0.6
CHD4-204ENST00000535810 JDP2Q8WYK2 163 aa11.33□□□□□ -0.6
CHD4-204ENST00000535810 CELF1Q92879 486 aaKnown RBP11.33□□□□□ -0.6
CHD4-204ENST00000535810 RTFDC1Q9BY42 306 aaPredicted RBP11.33□□□□□ -0.6
CHD4-204ENST00000535810 DUOX1Q9NRD9 1551 aa11.33□□□□□ -0.6
CHD4-204ENST00000535810 IQCA1LA6NCM1 817 aa11.32□□□□□ -0.6
CHD4-204ENST00000535810 FOXN1O15353 648 aa11.32□□□□□ -0.6
CHD4-204ENST00000535810 HSP90B1P14625 803 aaKnown RBP11.32□□□□□ -0.6
CHD4-204ENST00000535810 NEXNQ0ZGT2 675 aa11.32□□□□□ -0.6
CHD4-204ENST00000535810 CWF19L2Q2TBE0 894 aaKnown RBP11.32□□□□□ -0.6
CHD4-204ENST00000535810 DPP8Q6V1X1 898 aaPredicted RBP11.32□□□□□ -0.6
CHD4-204ENST00000535810 JARID2Q92833 1246 aaPredicted RBP11.32□□□□□ -0.6
CHD4-204ENST00000535810 CDHR2Q9BYE9 1310 aa11.32□□□□□ -0.6
CHD4-204ENST00000535810 CACNA1FO60840 1977 aa11.31□□□□□ -0.6
CHD4-204ENST00000535810 NEURL1BA8MQ27 555 aa11.31□□□□□ -0.6
CHD4-204ENST00000535810 PPIP5K2O43314 1243 aa11.31□□□□□ -0.6
CHD4-204ENST00000535810 CTCFP49711 727 aaPredicted RBP11.31□□□□□ -0.6
CHD4-204ENST00000535810 FKBP5Q13451 457 aaPredicted RBP11.31□□□□□ -0.6
CHD4-204ENST00000535810 AOC3Q16853 763 aa11.31□□□□□ -0.6
CHD4-204ENST00000535810 GPC2Q8N158 579 aa11.31□□□□□ -0.6
CHD4-204ENST00000535810 MPNDQ8N594 471 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms