RNA–Protein interactions for RNA: ENST00000535535.5

LMO3-212, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMO3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-212ENST00000535535 MKRN1Q9UHC7 482 aaKnown RBP11.87□□□□□ -0.51
LMO3-212ENST00000535535 KLF15Q9UIH9 416 aa11.87□□□□□ -0.51
LMO3-212ENST00000535535 GJA3Q9Y6H8 435 aa11.87□□□□□ -0.51
LMO3-212ENST00000535535 MLH3Q9UHC1 1453 aa11.87□□□□□ -0.51
LMO3-212ENST00000535535 NEURL1BA8MQ27 555 aa11.86□□□□□ -0.51
LMO3-212ENST00000535535 DKK1O94907 266 aa11.86□□□□□ -0.51
LMO3-212ENST00000535535 POTEAQ6S8J7 498 aa11.86□□□□□ -0.51
LMO3-212ENST00000535535 AVENQ9NQS1 362 aaPredicted RBP11.86□□□□□ -0.51
LMO3-212ENST00000535535 STRN4Q9NRL3 753 aa11.86□□□□□ -0.51
LMO3-212ENST00000535535 GPC6Q9Y625 555 aaPredicted RBP11.86□□□□□ -0.51
LMO3-212ENST00000535535 ABCC1P33527 1531 aa11.86□□□□□ -0.51
LMO3-212ENST00000535535 ZNF142P52746 1687 aaPredicted RBP11.86□□□□□ -0.51
LMO3-212ENST00000535535 M0R2N6 131 aa11.85□□□□□ -0.51
LMO3-212ENST00000535535 SUZ12Q15022 739 aaKnown RBP11.85□□□□□ -0.51
LMO3-212ENST00000535535 TSPAN10Q9H1Z9 355 aaPredicted RBP11.85□□□□□ -0.51
LMO3-212ENST00000535535 TRAPPC8Q9Y2L5 1435 aa11.85□□□□□ -0.51
LMO3-212ENST00000535535 CAMSAP1Q5T5Y3 1602 aa11.85□□□□□ -0.51
LMO3-212ENST00000535535 SERTM1A2A2V5 107 aa11.84□□□□□ -0.51
LMO3-212ENST00000535535 PALM3A6NDB9 673 aaPredicted RBP11.84□□□□□ -0.51
LMO3-212ENST00000535535 ADH6P28332 368 aa11.84□□□□□ -0.51
LMO3-212ENST00000535535 AFAP1Q8N556 730 aa11.84□□□□□ -0.51
LMO3-212ENST00000535535 RRAGCQ9HB90 399 aa11.84□□□□□ -0.51
LMO3-212ENST00000535535 ZNF232Q9UNY5 417 aa11.84□□□□□ -0.51
LMO3-212ENST00000535535 TROQ12816 1431 aaPredicted RBP11.84□□□□□ -0.51
LMO3-212ENST00000535535 FMN1Q68DA7 1419 aa11.84□□□□□ -0.51
LMO3-212ENST00000535535 HIRAP54198 1017 aaPredicted RBP11.83□□□□□ -0.52
LMO3-212ENST00000535535 LAMC2Q13753 1193 aa11.83□□□□□ -0.52
LMO3-212ENST00000535535 LINC00114Q6XXX2 140 aa11.83□□□□□ -0.52
LMO3-212ENST00000535535 FCHSD1Q86WN1 690 aa11.83□□□□□ -0.52
LMO3-212ENST00000535535 MAFBQ9Y5Q3 323 aaPredicted RBP11.83□□□□□ -0.52
LMO3-212ENST00000535535 CDC42BPAQ5VT25 1732 aa11.83□□□□□ -0.52
LMO3-212ENST00000535535 CNTLNQ9NXG0 1405 aa11.83□□□□□ -0.52
LMO3-212ENST00000535535 AMPD1P23109 780 aa11.83□□□□□ -0.52
LMO3-212ENST00000535535 PSMA6P60900 246 aaKnown RBP11.83□□□□□ -0.52
LMO3-212ENST00000535535 ZNF468Q5VIY5 522 aaPredicted RBP11.83□□□□□ -0.52
LMO3-212ENST00000535535 ZNF594Q96JF6 807 aaPredicted RBP11.83□□□□□ -0.52
LMO3-212ENST00000535535 BTBD6Q96KE9 485 aa11.83□□□□□ -0.52
LMO3-212ENST00000535535 MYO3AQ8NEV4 1616 aa11.82□□□□□ -0.52
LMO3-212ENST00000535535 COL8A1P27658 744 aa11.82□□□□□ -0.52
LMO3-212ENST00000535535 DGKGP49619 791 aa11.82□□□□□ -0.52
LMO3-212ENST00000535535 LRRC69Q6ZNQ3 347 aa11.82□□□□□ -0.52
LMO3-212ENST00000535535 MARK1Q9P0L2 795 aa11.82□□□□□ -0.52
LMO3-212ENST00000535535 CLIP1P30622 1438 aa11.81□□□□□ -0.52
LMO3-212ENST00000535535 NPATQ14207 1427 aa11.81□□□□□ -0.52
LMO3-212ENST00000535535 SFI1A8K8P3 1242 aa11.81□□□□□ -0.52
LMO3-212ENST00000535535 TSEN2Q8NCE0 465 aaKnown RBP11.81□□□□□ -0.52
LMO3-212ENST00000535535 TFIP11Q9UBB9 837 aaKnown RBP11.81□□□□□ -0.52
LMO3-212ENST00000535535 TIMELESSQ9UNS1 1208 aa11.81□□□□□ -0.52
LMO3-212ENST00000535535 ARHGAP35Q9NRY4 1499 aa11.81□□□□□ -0.52
LMO3-212ENST00000535535 CLTCQ00610 1675 aaKnown RBP11.8□□□□□ -0.52
LMO3-212ENST00000535535 CDK11AQ9UQ88 783 aaPredicted RBP11.8□□□□□ -0.52
LMO3-212ENST00000535535 LOC100996750A0A140TA64 210 aa11.79□□□□□ -0.52
LMO3-212ENST00000535535 A6NJR5 290 aa11.79□□□□□ -0.52
LMO3-212ENST00000535535 PROCP04070 461 aa11.79□□□□□ -0.52
LMO3-212ENST00000535535 PCBP4P57723 403 aaKnown RBP11.79□□□□□ -0.52
LMO3-212ENST00000535535 CHSY3Q70JA7 882 aa11.79□□□□□ -0.52
LMO3-212ENST00000535535 ALYREFQ86V81 257 aaKnown RBP11.79□□□□□ -0.52
LMO3-212ENST00000535535 RHPN1Q8TCX5 695 aa11.79□□□□□ -0.52
LMO3-212ENST00000535535 SPOCK3Q9BQ16 436 aa11.79□□□□□ -0.52
LMO3-212ENST00000535535 KRTAP4-6Q9BYQ5 205 aa11.79□□□□□ -0.52
LMO3-212ENST00000535535 C1orf53Q5VUE5 145 aa11.78□□□□□ -0.52
LMO3-212ENST00000535535 SUV39H2Q9H5I1 410 aa11.78□□□□□ -0.52
LMO3-212ENST00000535535 SAMD9LQ8IVG5 1584 aa11.78□□□□□ -0.52
LMO3-212ENST00000535535 CEP170BQ9Y4F5 1589 aaPredicted RBP11.78□□□□□ -0.52
LMO3-212ENST00000535535 PLA2R1Q13018 1463 aa11.78□□□□□ -0.52
LMO3-212ENST00000535535 KRBA1A5PL33 1030 aa11.77□□□□□ -0.52
LMO3-212ENST00000535535 GNB5O14775 395 aa11.77□□□□□ -0.52
LMO3-212ENST00000535535 MSTNO14793 375 aa11.77□□□□□ -0.52
LMO3-212ENST00000535535 C21orf2O43822 256 aa11.77□□□□□ -0.52
LMO3-212ENST00000535535 RASA1P20936 1047 aa11.76□□□□□ -0.53
LMO3-212ENST00000535535 GRIN2CQ14957 1233 aa11.76□□□□□ -0.53
LMO3-212ENST00000535535 PHACTR1Q9C0D0 580 aa11.76□□□□□ -0.53
LMO3-212ENST00000535535 PRR12Q9ULL5 1215 aa11.76□□□□□ -0.53
LMO3-212ENST00000535535 PLXNC1O60486 1568 aa11.76□□□□□ -0.53
LMO3-212ENST00000535535 POLR1AO95602 1720 aaPredicted RBP11.76□□□□□ -0.53
LMO3-212ENST00000535535 ZNF335Q9H4Z2 1342 aaPredicted RBP11.76□□□□□ -0.53
LMO3-212ENST00000535535 TCOF1Q13428 1488 aaKnown RBP11.76□□□□□ -0.53
LMO3-212ENST00000535535 MED1Q15648 1581 aaPredicted RBP11.76□□□□□ -0.53
LMO3-212ENST00000535535 MDFIQ99750 246 aa11.76□□□□□ -0.53
LMO3-212ENST00000535535 PPP1R12CQ9BZL4 782 aa11.76□□□□□ -0.53
LMO3-212ENST00000535535 CHMP3Q9Y3E7 222 aa11.76□□□□□ -0.53
LMO3-212ENST00000535535 HSH2DQ96JZ2 352 aa11.75□□□□□ -0.53
LMO3-212ENST00000535535 HCN4Q9Y3Q4 1203 aa11.75□□□□□ -0.53
LMO3-212ENST00000535535 INO80Q9ULG1 1556 aaPredicted RBP11.74□□□□□ -0.53
LMO3-212ENST00000535535 UBAP1LF5GYI3 381 aa11.74□□□□□ -0.53
LMO3-212ENST00000535535 PPP1R12BO60237 982 aaPredicted RBP11.74□□□□□ -0.53
LMO3-212ENST00000535535 STAG2Q8N3U4 1231 aa11.74□□□□□ -0.53
LMO3-212ENST00000535535 NEUROD4Q9HD90 331 aa11.74□□□□□ -0.53
LMO3-212ENST00000535535 RBM19Q9Y4C8 960 aaKnown RBP11.74□□□□□ -0.53
LMO3-212ENST00000535535 SYCP2Q9BX26 1530 aa11.74□□□□□ -0.53
LMO3-212ENST00000535535 ZMYM3Q14202 1370 aa11.73□□□□□ -0.53
LMO3-212ENST00000535535 CCDC18Q5T9S5 1454 aa11.73□□□□□ -0.53
LMO3-212ENST00000535535 PIK3R2O00459 728 aa11.73□□□□□ -0.53
LMO3-212ENST00000535535 SEC13P55735 322 aa11.73□□□□□ -0.53
LMO3-212ENST00000535535 SFSWAPQ12872 951 aaKnown RBP11.73□□□□□ -0.53
LMO3-212ENST00000535535 CRTC2Q53ET0 693 aaPredicted RBP11.73□□□□□ -0.53
LMO3-212ENST00000535535 SYT9Q86SS6 491 aa11.73□□□□□ -0.53
LMO3-212ENST00000535535 CALR3Q96L12 384 aaKnown RBP11.73□□□□□ -0.53
LMO3-212ENST00000535535 ATP7AQ04656 1500 aa11.72□□□□□ -0.53
LMO3-212ENST00000535535 KANK4Q5T7N3 995 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms