RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 HYPKQ9NX55 129 aa10.86□□□□□ -0.67
SF3B2-216ENST00000534765 SPATA31A5Q5VU36 1347 aa10.86□□□□□ -0.67
SF3B2-216ENST00000534765 SPATA31A7Q8IWB4 1347 aa10.86□□□□□ -0.67
SF3B2-216ENST00000534765 NPHP1O15259 732 aa10.86□□□□□ -0.67
SF3B2-216ENST00000534765 FAM98CQ17RN3 349 aaKnown RBP10.86□□□□□ -0.67
SF3B2-216ENST00000534765 ANKRD13DQ6ZTN6 518 aa10.86□□□□□ -0.67
SF3B2-216ENST00000534765 NDUFB9Q9Y6M9 179 aa10.86□□□□□ -0.67
SF3B2-216ENST00000534765 UTYO14607 1347 aa10.86□□□□□ -0.67
SF3B2-216ENST00000534765 NWD2Q9ULI1 1742 aa10.85□□□□□ -0.67
SF3B2-216ENST00000534765 RIC3Q7Z5B4 369 aa10.85□□□□□ -0.67
SF3B2-216ENST00000534765 ZNF592Q92610 1267 aa10.85□□□□□ -0.67
SF3B2-216ENST00000534765 METTL22Q9BUU2 404 aaPredicted RBP10.85□□□□□ -0.67
SF3B2-216ENST00000534765 SIL1Q9H173 461 aa10.85□□□□□ -0.67
SF3B2-216ENST00000534765 GRM8O00222 908 aa10.85□□□□□ -0.67
SF3B2-216ENST00000534765 ZKSCAN5Q9Y2L8 839 aa10.85□□□□□ -0.67
SF3B2-216ENST00000534765 NUP98P52948 1817 aa10.84□□□□□ -0.67
SF3B2-216ENST00000534765 RFX5P48382 616 aaPredicted RBP10.84□□□□□ -0.67
SF3B2-216ENST00000534765 PI4K2BQ8TCG2 481 aa10.84□□□□□ -0.67
SF3B2-216ENST00000534765 TAF1P21675 1872 aa10.84□□□□□ -0.67
SF3B2-216ENST00000534765 ITPK1Q13572 414 aa10.84□□□□□ -0.67
SF3B2-216ENST00000534765 UBE3BQ7Z3V4 1068 aa10.84□□□□□ -0.67
SF3B2-216ENST00000534765 SLC51AQ86UW1 340 aa10.84□□□□□ -0.67
SF3B2-216ENST00000534765 ZBTB1Q9Y2K1 713 aa10.84□□□□□ -0.67
SF3B2-216ENST00000534765 ZNF330Q9Y3S2 320 aaPredicted RBP10.84□□□□□ -0.67
SF3B2-216ENST00000534765 SURF6O75683 361 aaKnown RBP10.84□□□□□ -0.67
SF3B2-216ENST00000534765 MYCNP04198 464 aaPredicted RBP10.84□□□□□ -0.67
SF3B2-216ENST00000534765 GNAI3P08754 354 aa10.84□□□□□ -0.67
SF3B2-216ENST00000534765 SSFA2P28290 1259 aa10.84□□□□□ -0.67
SF3B2-216ENST00000534765 HMGN5P82970 282 aaKnown RBP10.84□□□□□ -0.67
SF3B2-216ENST00000534765 TEX2Q8IWB9 1127 aa10.84□□□□□ -0.67
SF3B2-216ENST00000534765 LINS1Q8NG48 757 aa10.84□□□□□ -0.67
SF3B2-216ENST00000534765 TMOD3Q9NYL9 352 aa10.84□□□□□ -0.67
SF3B2-216ENST00000534765 RBM27Q9P2N5 1060 aaKnown RBP10.84□□□□□ -0.67
SF3B2-216ENST00000534765 HSPA1LP34931 641 aa10.83□□□□□ -0.68
SF3B2-216ENST00000534765 AK9Q5TCS8 1911 aa10.83□□□□□ -0.68
SF3B2-216ENST00000534765 FOXO4P98177 505 aa10.83□□□□□ -0.68
SF3B2-216ENST00000534765 ANTXR1Q9H6X2 564 aa10.83□□□□□ -0.68
SF3B2-216ENST00000534765 SLFNL1Q499Z3 407 aa10.83□□□□□ -0.68
SF3B2-216ENST00000534765 RHPN1Q8TCX5 695 aa10.83□□□□□ -0.68
SF3B2-216ENST00000534765 CASZ1Q86V15 1759 aa10.83□□□□□ -0.68
SF3B2-216ENST00000534765 PRPF40AO75400 957 aaKnown RBP10.82□□□□□ -0.68
SF3B2-216ENST00000534765 CYP19A1P11511 503 aaPredicted RBP10.82□□□□□ -0.68
SF3B2-216ENST00000534765 ZNF594Q96JF6 807 aaPredicted RBP10.82□□□□□ -0.68
SF3B2-216ENST00000534765 CCDC85AQ96PX6 553 aaPredicted RBP10.82□□□□□ -0.68
SF3B2-216ENST00000534765 EDC3Q96F86 508 aaKnown RBP10.82□□□□□ -0.68
SF3B2-216ENST00000534765 C9orf78Q9NZ63 289 aaPredicted RBP10.82□□□□□ -0.68
SF3B2-216ENST00000534765 LRRCC1Q9C099 1032 aa10.82□□□□□ -0.68
SF3B2-216ENST00000534765 SYCE3A1L190 88 aa10.81□□□□□ -0.68
SF3B2-216ENST00000534765 DTNBO60941 627 aa10.81□□□□□ -0.68
SF3B2-216ENST00000534765 TERF1P54274 439 aa10.81□□□□□ -0.68
SF3B2-216ENST00000534765 MTX1Q13505 466 aa10.81□□□□□ -0.68
SF3B2-216ENST00000534765 EAF2Q96CJ1 260 aaPredicted RBP10.81□□□□□ -0.68
SF3B2-216ENST00000534765 NOL7Q9UMY1 257 aaKnown RBP10.81□□□□□ -0.68
SF3B2-216ENST00000534765 EXOC5O00471 708 aa10.81□□□□□ -0.68
SF3B2-216ENST00000534765 PLEKHG2Q9H7P9 1386 aa10.81□□□□□ -0.68
SF3B2-216ENST00000534765 COL5A3P25940 1745 aaPredicted RBP10.81□□□□□ -0.68
SF3B2-216ENST00000534765 TOM1O60784 492 aa10.81□□□□□ -0.68
SF3B2-216ENST00000534765 A0A0G2JS52 829 aa10.8□□□□□ -0.68
SF3B2-216ENST00000534765 PTPN12Q05209 780 aaKnown RBP10.8□□□□□ -0.68
SF3B2-216ENST00000534765 INTS5Q6P9B9 1019 aaKnown RBP10.8□□□□□ -0.68
SF3B2-216ENST00000534765 UBN2Q6ZU65 1347 aa10.8□□□□□ -0.68
SF3B2-216ENST00000534765 OSBPL3Q9H4L5 887 aa10.8□□□□□ -0.68
SF3B2-216ENST00000534765 A0A087WZG4 1122 aa10.8□□□□□ -0.68
SF3B2-216ENST00000534765 MX1P20591 662 aa10.8□□□□□ -0.68
SF3B2-216ENST00000534765 DRC7Q8IY82 874 aa10.8□□□□□ -0.68
SF3B2-216ENST00000534765 PLBD2Q8NHP8 589 aa10.8□□□□□ -0.68
SF3B2-216ENST00000534765 PUS3Q9BZE2 481 aaKnown RBP10.8□□□□□ -0.68
SF3B2-216ENST00000534765 RBSNQ9H1K0 784 aa10.8□□□□□ -0.68
SF3B2-216ENST00000534765 PALD1Q9ULE6 856 aa10.8□□□□□ -0.68
SF3B2-216ENST00000534765 CCDC9Q9Y3X0 531 aaKnown RBP10.8□□□□□ -0.68
SF3B2-216ENST00000534765 ALDH1L1O75891 902 aa10.79□□□□□ -0.68
SF3B2-216ENST00000534765 DDB1Q16531 1140 aa10.79□□□□□ -0.68
SF3B2-216ENST00000534765 FAM89AQ96GI7 184 aa10.79□□□□□ -0.68
SF3B2-216ENST00000534765 CCDC8Q9H0W5 538 aaPredicted RBP10.79□□□□□ -0.68
SF3B2-216ENST00000534765 TTC12Q9H892 705 aaPredicted RBP10.79□□□□□ -0.68
SF3B2-216ENST00000534765 TBC1D2BQ9UPU7 963 aa10.79□□□□□ -0.68
SF3B2-216ENST00000534765 ANKRD36CQ5JPF3 1778 aa10.79□□□□□ -0.68
SF3B2-216ENST00000534765 GPTP24298 496 aa10.79□□□□□ -0.68
SF3B2-216ENST00000534765 GTF2F1P35269 517 aaKnown RBP eCLIP10.79□□□□□ -0.68
SF3B2-216ENST00000534765 SBF2Q86WG5 1849 aa10.79□□□□□ -0.68
SF3B2-216ENST00000534765 THSD7AQ9UPZ6 1657 aa10.79□□□□□ -0.68
SF3B2-216ENST00000534765 WTIPA6NIX2 430 aaPredicted RBP10.79□□□□□ -0.68
SF3B2-216ENST00000534765 LRRC24Q50LG9 513 aa10.79□□□□□ -0.68
SF3B2-216ENST00000534765 BCL2L12Q9HB09 334 aa10.79□□□□□ -0.68
SF3B2-216ENST00000534765 BTAF1O14981 1849 aa10.79□□□□□ -0.68
SF3B2-216ENST00000534765 GTF2A1P52655 376 aaPredicted RBP10.78□□□□□ -0.68
SF3B2-216ENST00000534765 MYRIPQ8NFW9 859 aa10.78□□□□□ -0.68
SF3B2-216ENST00000534765 MYO5AQ9Y4I1 1855 aaKnown RBP10.78□□□□□ -0.68
SF3B2-216ENST00000534765 RREB1Q92766 1687 aa10.78□□□□□ -0.68
SF3B2-216ENST00000534765 NOL8Q76FK4 1167 aaKnown RBP10.78□□□□□ -0.68
SF3B2-216ENST00000534765 SPC24Q8NBT2 197 aa10.78□□□□□ -0.68
SF3B2-216ENST00000534765 RGS22Q8NE09 1264 aa10.78□□□□□ -0.68
SF3B2-216ENST00000534765 BRWD3Q6RI45 1802 aa10.78□□□□□ -0.68
SF3B2-216ENST00000534765 H7C1W4 665 aa10.78□□□□□ -0.68
SF3B2-216ENST00000534765 CALCOCO1Q9P1Z2 691 aa10.78□□□□□ -0.68
SF3B2-216ENST00000534765 FAM193AP78312 1265 aa10.78□□□□□ -0.68
SF3B2-216ENST00000534765 ATG9AQ7Z3C6 839 aa10.78□□□□□ -0.68
SF3B2-216ENST00000534765 NGLY1Q96IV0 654 aa10.78□□□□□ -0.68
SF3B2-216ENST00000534765 DIAPH3Q9NSV4 1193 aa10.78□□□□□ -0.68
SF3B2-216ENST00000534765 STAP2Q9UGK3 403 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 184.6 ms