RNA–Protein interactions for RNA: ENST00000534317.1

PDE3B-205, Transcript of phosphodiesterase 3B, humanhuman

TSL 1 (best)

Gene PDE3B, Length 5,521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE3B-205ENST00000534317 KRT23Q9C075 422 aa21.43■■□□□ 1.02
PDE3B-205ENST00000534317 TAOK3Q9H2K8 898 aa21.43■■□□□ 1.02
PDE3B-205ENST00000534317 ZBTB43O43298 467 aa21.43■■□□□ 1.02
PDE3B-205ENST00000534317 CEBPAP49715 358 aaPredicted RBP21.43■■□□□ 1.02
PDE3B-205ENST00000534317 LAMC3Q9Y6N6 1575 aa21.43■■□□□ 1.02
PDE3B-205ENST00000534317 BMP15O95972 392 aa21.43■■□□□ 1.02
PDE3B-205ENST00000534317 NBPF7P0C2Y1 421 aaPredicted RBP21.43■■□□□ 1.02
PDE3B-205ENST00000534317 SMC1AQ14683 1233 aaKnown RBP21.43■■□□□ 1.02
PDE3B-205ENST00000534317 MICALCLQ6ZW33 695 aa21.43■■□□□ 1.02
PDE3B-205ENST00000534317 C8orf58Q8NAV2 365 aa21.43■■□□□ 1.02
PDE3B-205ENST00000534317 FAM200AQ8TCP9 573 aa21.43■■□□□ 1.02
PDE3B-205ENST00000534317 TTC21AQ8NDW8 1320 aa21.43■■□□□ 1.02
PDE3B-205ENST00000534317 UBASH3AP57075 661 aa21.42■■□□□ 1.02
PDE3B-205ENST00000534317 ANO6Q4KMQ2 910 aa21.42■■□□□ 1.02
PDE3B-205ENST00000534317 MACROD2A1Z1Q3 448 aa21.42■■□□□ 1.02
PDE3B-205ENST00000534317 MCMDC2Q4G0Z9 681 aa21.42■■□□□ 1.02
PDE3B-205ENST00000534317 STXBP4Q6ZWJ1 553 aa21.42■■□□□ 1.02
PDE3B-205ENST00000534317 EHBP1Q8NDI1 1231 aa21.42■■□□□ 1.02
PDE3B-205ENST00000534317 ALG1Q9BT22 464 aa21.42■■□□□ 1.02
PDE3B-205ENST00000534317 CRNKL1Q9BZJ0 848 aaKnown RBP21.42■■□□□ 1.02
PDE3B-205ENST00000534317 BMS1Q14692 1282 aaKnown RBP21.42■■□□□ 1.02
PDE3B-205ENST00000534317 TRIM47Q96LD4 638 aa21.42■■□□□ 1.02
PDE3B-205ENST00000534317 MRPS27Q92552 414 aaKnown RBP21.42■■□□□ 1.02
PDE3B-205ENST00000534317 TCEANC2Q96MN5 208 aa21.42■■□□□ 1.02
PDE3B-205ENST00000534317 LRRC2Q9BYS8 371 aa21.42■■□□□ 1.02
PDE3B-205ENST00000534317 C8orf34Q49A92 452 aa21.42■■□□□ 1.02
PDE3B-205ENST00000534317 TMTC2Q8N394 836 aa21.41■■□□□ 1.02
PDE3B-205ENST00000534317 XAGE3Q8WTP9 111 aa21.41■■□□□ 1.02
PDE3B-205ENST00000534317 CTR9Q6PD62 1173 aa21.41■■□□□ 1.02
PDE3B-205ENST00000534317 HOOK3Q86VS8 718 aa21.41■■□□□ 1.02
PDE3B-205ENST00000534317 GRM8O00222 908 aa21.41■■□□□ 1.02
PDE3B-205ENST00000534317 F13A1P00488 732 aa21.41■■□□□ 1.02
PDE3B-205ENST00000534317 JADE2Q9NQC1 790 aa21.41■■□□□ 1.02
PDE3B-205ENST00000534317 NOP2P46087 812 aaKnown RBP21.4■■□□□ 1.02
PDE3B-205ENST00000534317 FAM107BQ9H098 131 aa21.4■■□□□ 1.02
PDE3B-205ENST00000534317 EXOC1Q9NV70 894 aa21.4■■□□□ 1.02
PDE3B-205ENST00000534317 CNNM2Q9H8M5 875 aa21.4■■□□□ 1.02
PDE3B-205ENST00000534317 PARD3Q8TEW0 1356 aa21.4■■□□□ 1.02
PDE3B-205ENST00000534317 Q6ZUG5 572 aa21.39■■□□□ 1.02
PDE3B-205ENST00000534317 CTAGE1Q96RT6 745 aa21.39■■□□□ 1.02
PDE3B-205ENST00000534317 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.39■■□□□ 1.02
PDE3B-205ENST00000534317 CCDC152Q4G0S7 254 aa21.39■■□□□ 1.02
PDE3B-205ENST00000534317 KSR2Q6VAB6 950 aa21.39■■□□□ 1.02
PDE3B-205ENST00000534317 COPS6Q7L5N1 327 aa21.39■■□□□ 1.02
PDE3B-205ENST00000534317 RRAGBQ5VZM2 374 aa21.39■■□□□ 1.01
PDE3B-205ENST00000534317 KDM5BQ9UGL1 1544 aa21.39■■□□□ 1.01
PDE3B-205ENST00000534317 GOLGA6L10A0A0M3HER8 536 aa21.39■■□□□ 1.01
PDE3B-205ENST00000534317 ATP2B3Q16720 1220 aa21.39■■□□□ 1.01
PDE3B-205ENST00000534317 RNF187Q5TA31 235 aaPredicted RBP21.39■■□□□ 1.01
PDE3B-205ENST00000534317 DACT1Q9NYF0 836 aa21.39■■□□□ 1.01
PDE3B-205ENST00000534317 NUP160Q12769 1436 aa21.39■■□□□ 1.01
PDE3B-205ENST00000534317 POLR3AO14802 1390 aaPredicted RBP21.39■■□□□ 1.01
PDE3B-205ENST00000534317 HLA-DOAP06340 250 aa21.39■■□□□ 1.01
PDE3B-205ENST00000534317 SKILP12757 684 aa21.39■■□□□ 1.01
PDE3B-205ENST00000534317 XRCC6P12956 609 aaKnown RBP eCLIP21.39■■□□□ 1.01
PDE3B-205ENST00000534317 GTF2F1P35269 517 aaKnown RBP eCLIP21.39■■□□□ 1.011e-7■■□□□ 11.5
PDE3B-205ENST00000534317 ESR2Q92731 530 aa21.38■■□□□ 1.01
PDE3B-205ENST00000534317 GPATCH8Q9UKJ3 1502 aaKnown RBP21.38■■□□□ 1.01
PDE3B-205ENST00000534317 IBSPP21815 317 aaPredicted RBP21.38■■□□□ 1.01
PDE3B-205ENST00000534317 PRPF4BQ13523 1007 aaKnown RBP21.38■■□□□ 1.01
PDE3B-205ENST00000534317 C16orf71Q8IYS4 520 aaPredicted RBP21.38■■□□□ 1.01
PDE3B-205ENST00000534317 AKR1B10O60218 316 aa21.38■■□□□ 1.01
PDE3B-205ENST00000534317 NOLC1Q14978 699 aaKnown RBP eCLIP21.38■■□□□ 1.01
PDE3B-205ENST00000534317 RTN1Q16799 776 aa21.38■■□□□ 1.01
PDE3B-205ENST00000534317 ZSWIM4Q9H7M6 989 aa21.38■■□□□ 1.01
PDE3B-205ENST00000534317 CCDC186Q7Z3E2 898 aa21.38■■□□□ 1.01
PDE3B-205ENST00000534317 ZNF830Q96NB3 372 aaPredicted RBP21.38■■□□□ 1.01
PDE3B-205ENST00000534317 CTNNA2P26232 953 aa21.37■■□□□ 1.01
PDE3B-205ENST00000534317 IL15P40933 162 aaPredicted RBP21.37■■□□□ 1.01
PDE3B-205ENST00000534317 GSTO1P78417 241 aa21.37■■□□□ 1.01
PDE3B-205ENST00000534317 GIMAP7Q8NHV1 300 aa21.37■■□□□ 1.01
PDE3B-205ENST00000534317 CABP5Q9NP86 173 aa21.37■■□□□ 1.01
PDE3B-205ENST00000534317 DNM1Q05193 864 aaKnown RBP21.37■■□□□ 1.01
PDE3B-205ENST00000534317 MYO1BO43795 1136 aa21.37■■□□□ 1.01
PDE3B-205ENST00000534317 AFMP43652 599 aa21.37■■□□□ 1.01
PDE3B-205ENST00000534317 SPAG1Q07617 926 aa21.37■■□□□ 1.01
PDE3B-205ENST00000534317 LMBR1LQ6UX01 489 aa21.37■■□□□ 1.01
PDE3B-205ENST00000534317 SYCP3Q8IZU3 236 aa21.37■■□□□ 1.01
PDE3B-205ENST00000534317 STX8Q9UNK0 236 aa21.37■■□□□ 1.01
PDE3B-205ENST00000534317 PRC1O43663 620 aa21.36■■□□□ 1.01
PDE3B-205ENST00000534317 CCDC175P0C221 793 aa21.36■■□□□ 1.01
PDE3B-205ENST00000534317 IFIT1BQ5T764 474 aaKnown RBP21.36■■□□□ 1.01
PDE3B-205ENST00000534317 CYP7A1P22680 504 aa21.36■■□□□ 1.01
PDE3B-205ENST00000534317 SLC4A4Q9Y6R1 1079 aa21.36■■□□□ 1.01
PDE3B-205ENST00000534317 TTC41PQ6P2S7 1318 aa21.36■■□□□ 1.01
PDE3B-205ENST00000534317 LIG1P18858 919 aa21.36■■□□□ 1.01
PDE3B-205ENST00000534317 CLCN1P35523 988 aa21.36■■□□□ 1.01
PDE3B-205ENST00000534317 CHRNA2Q15822 529 aa21.36■■□□□ 1.01
PDE3B-205ENST00000534317 IFI16Q16666 785 aaKnown RBP21.36■■□□□ 1.01
PDE3B-205ENST00000534317 SLC4A8Q2Y0W8 1093 aa21.36■■□□□ 1.01
PDE3B-205ENST00000534317 AKAP4Q5JQC9 854 aa21.36■■□□□ 1.01
PDE3B-205ENST00000534317 MAATS1Q7Z4T9 603 aa21.36■■□□□ 1.01
PDE3B-205ENST00000534317 DCTPP1Q9H773 170 aa21.36■■□□□ 1.01
PDE3B-205ENST00000534317 THOC2Q8NI27 1593 aaKnown RBP21.35■■□□□ 1.01
PDE3B-205ENST00000534317 NMIQ13287 307 aaPredicted RBP21.35■■□□□ 1.01
PDE3B-205ENST00000534317 FEZ1Q99689 392 aa21.35■■□□□ 1.01
PDE3B-205ENST00000534317 STAT6P42226 847 aa21.35■■□□□ 1.01
PDE3B-205ENST00000534317 PPIP5K1Q6PFW1 1433 aa21.35■■□□□ 1.01
PDE3B-205ENST00000534317 TBCAO75347 108 aaKnown RBP21.35■■□□□ 1.01
PDE3B-205ENST00000534317 CYLC1P35663 651 aaPredicted RBP21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms