RNA–Protein interactions for RNA: ENST00000534284.1

CYCSP28-201, Transcript of cytochrome c, somatic pseudogene 28, humanhuman

BASIC

Gene CYCSP28, Length 321 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP28-201ENST00000534284 SH3PXD2AQ5TCZ1 1133 aa6.33□□□□□ -1.4
CYCSP28-201ENST00000534284 ALG1LQ6GMV1 187 aa6.33□□□□□ -1.4
CYCSP28-201ENST00000534284 IFT43Q96FT9 208 aa6.33□□□□□ -1.4
CYCSP28-201ENST00000534284 MPHOSPH9Q99550 1183 aa6.33□□□□□ -1.4
CYCSP28-201ENST00000534284 KLK14Q9P0G3 267 aa6.33□□□□□ -1.4
CYCSP28-201ENST00000534284 CDK13Q14004 1512 aaKnown RBP6.33□□□□□ -1.4
CYCSP28-201ENST00000534284 SYNJ2O15056 1496 aa6.33□□□□□ -1.4
CYCSP28-201ENST00000534284 NUP153P49790 1475 aaKnown RBP6.33□□□□□ -1.4
CYCSP28-201ENST00000534284 ANKRD30BQ9BXX2 1392 aa6.32□□□□□ -1.4
CYCSP28-201ENST00000534284 SMPD1P17405 629 aa6.32□□□□□ -1.4
CYCSP28-201ENST00000534284 HDLBPQ00341 1268 aaKnown RBP6.32□□□□□ -1.4
CYCSP28-201ENST00000534284 TMC4Q7Z404 712 aa6.32□□□□□ -1.4
CYCSP28-201ENST00000534284 ALKBH8Q96BT7 664 aaKnown RBP6.32□□□□□ -1.4
CYCSP28-201ENST00000534284 ZSCAN10Q96SZ4 725 aaPredicted RBP6.32□□□□□ -1.4
CYCSP28-201ENST00000534284 NIFKQ9BYG3 293 aaKnown RBP6.32□□□□□ -1.4
CYCSP28-201ENST00000534284 PHACTR1Q9C0D0 580 aa6.32□□□□□ -1.4
CYCSP28-201ENST00000534284 IQSEC3Q9UPP2 1182 aaPredicted RBP6.32□□□□□ -1.4
CYCSP28-201ENST00000534284 ABCC5O15440 1437 aa6.32□□□□□ -1.4
CYCSP28-201ENST00000534284 NCOA1Q15788 1441 aa6.32□□□□□ -1.4
CYCSP28-201ENST00000534284 ANKRD30AQ9BXX3 1397 aa6.31□□□□□ -1.4
CYCSP28-201ENST00000534284 EIF4G3O43432 1585 aaKnown RBP6.31□□□□□ -1.4
CYCSP28-201ENST00000534284 CROCC2H7BZ55 1655 aa6.31□□□□□ -1.4
CYCSP28-201ENST00000534284 TEX14Q8IWB6 1497 aa6.31□□□□□ -1.4
CYCSP28-201ENST00000534284 DAB2P98082 770 aa6.31□□□□□ -1.4
CYCSP28-201ENST00000534284 RELBQ01201 579 aa6.31□□□□□ -1.4
CYCSP28-201ENST00000534284 ENOX2Q16206 610 aaKnown RBP6.31□□□□□ -1.4
CYCSP28-201ENST00000534284 FAM26DQ5JW98 314 aa6.31□□□□□ -1.4
CYCSP28-201ENST00000534284 ETFBKMTQ8IXQ9 262 aa6.31□□□□□ -1.4
CYCSP28-201ENST00000534284 GPR152Q8TDT2 470 aa6.31□□□□□ -1.4
CYCSP28-201ENST00000534284 SETDB2Q96T68 719 aa6.31□□□□□ -1.4
CYCSP28-201ENST00000534284 RRP7BPQ9NSQ0 103 aa6.31□□□□□ -1.4
CYCSP28-201ENST00000534284 RNF19AQ9NV58 838 aa6.31□□□□□ -1.4
CYCSP28-201ENST00000534284 ROCK2O75116 1388 aaKnown RBP6.31□□□□□ -1.4
CYCSP28-201ENST00000534284 ARHGEF12Q9NZN5 1544 aa6.3□□□□□ -1.4
CYCSP28-201ENST00000534284 CAMSAP2Q08AD1 1489 aa6.3□□□□□ -1.4
CYCSP28-201ENST00000534284 TERTO14746 1132 aaKnown RBP6.3□□□□□ -1.4
CYCSP28-201ENST00000534284 PDGFAP04085 211 aa6.3□□□□□ -1.4
CYCSP28-201ENST00000534284 HSPA5P11021 654 aaKnown RBP6.3□□□□□ -1.4
CYCSP28-201ENST00000534284 PTGIRP43119 386 aa6.3□□□□□ -1.4
CYCSP28-201ENST00000534284 HIRAP54198 1017 aaPredicted RBP6.3□□□□□ -1.4
CYCSP28-201ENST00000534284 GNASQ5JWF2 1037 aa6.3□□□□□ -1.4
CYCSP28-201ENST00000534284 SLC27A3Q5K4L6 730 aa6.3□□□□□ -1.4
CYCSP28-201ENST00000534284 NT5DC4Q86YG4 428 aa6.3□□□□□ -1.4
CYCSP28-201ENST00000534284 TREML1Q86YW5 311 aa6.3□□□□□ -1.4
CYCSP28-201ENST00000534284 GJD3Q8N144 294 aa6.3□□□□□ -1.4
CYCSP28-201ENST00000534284 ZDHHC1Q8WTX9 485 aa6.3□□□□□ -1.4
CYCSP28-201ENST00000534284 RNF34Q969K3 372 aa6.3□□□□□ -1.4
CYCSP28-201ENST00000534284 AIDAQ96BJ3 306 aa6.3□□□□□ -1.4
CYCSP28-201ENST00000534284 AGBL1Q96MI9 1066 aa6.3□□□□□ -1.4
CYCSP28-201ENST00000534284 CCSER2Q9H7U1 834 aa6.3□□□□□ -1.4
CYCSP28-201ENST00000534284 ZNF395Q9H8N7 513 aaPredicted RBP6.3□□□□□ -1.4
CYCSP28-201ENST00000534284 ATP13A2Q9NQ11 1180 aa6.3□□□□□ -1.4
CYCSP28-201ENST00000534284 FAM13BQ9NYF5 915 aa6.3□□□□□ -1.4
CYCSP28-201ENST00000534284 NUP160Q12769 1436 aa6.3□□□□□ -1.4
CYCSP28-201ENST00000534284 CCDC7Q96M83 1385 aa6.3□□□□□ -1.4
CYCSP28-201ENST00000534284 DENND4BO75064 1496 aaPredicted RBP6.29□□□□□ -1.4
CYCSP28-201ENST00000534284 KIF14Q15058 1648 aa6.29□□□□□ -1.4
CYCSP28-201ENST00000534284 ZIC2O95409 532 aaPredicted RBP6.29□□□□□ -1.4
CYCSP28-201ENST00000534284 HMGB1P09429 215 aaKnown RBP6.29□□□□□ -1.4
CYCSP28-201ENST00000534284 INSM1Q01101 510 aaPredicted RBP6.29□□□□□ -1.4
CYCSP28-201ENST00000534284 UBXN4Q92575 508 aa6.29□□□□□ -1.4
CYCSP28-201ENST00000534284 NUDT16Q96DE0 195 aaKnown RBP6.29□□□□□ -1.4
CYCSP28-201ENST00000534284 CSRNP1Q96S65 589 aa6.29□□□□□ -1.4
CYCSP28-201ENST00000534284 CFDP1Q9UEE9 299 aaPredicted RBP6.29□□□□□ -1.4
CYCSP28-201ENST00000534284 KIAA1107Q9UPP5 1409 aa6.29□□□□□ -1.4
CYCSP28-201ENST00000534284 HRH3Q9Y5N1 445 aa6.29□□□□□ -1.4
CYCSP28-201ENST00000534284 KDM5DQ9BY66 1539 aa6.29□□□□□ -1.4
CYCSP28-201ENST00000534284 KTN1Q86UP2 1357 aaKnown RBP6.29□□□□□ -1.4
CYCSP28-201ENST00000534284 WASHC2AQ641Q2 1341 aa6.28□□□□□ -1.4
CYCSP28-201ENST00000534284 SPATA31E1Q6ZUB1 1445 aa6.28□□□□□ -1.4
CYCSP28-201ENST00000534284 TTC24A2A3L6 582 aaPredicted RBP6.28□□□□□ -1.4
CYCSP28-201ENST00000534284 J3QL48 77 aa6.28□□□□□ -1.4
CYCSP28-201ENST00000534284 IGHA2P01877 340 aa6.28□□□□□ -1.4
CYCSP28-201ENST00000534284 RPLP1P05386 114 aaKnown RBP6.28□□□□□ -1.4
CYCSP28-201ENST00000534284 GNA15P30679 374 aa6.28□□□□□ -1.4
CYCSP28-201ENST00000534284 ZNF76P36508 570 aa6.28□□□□□ -1.4
CYCSP28-201ENST00000534284 WDR4P57081 412 aaKnown RBP6.28□□□□□ -1.4
CYCSP28-201ENST00000534284 HIF1AQ16665 826 aa6.28□□□□□ -1.4
CYCSP28-201ENST00000534284 RHPN1Q8TCX5 695 aa6.28□□□□□ -1.4
CYCSP28-201ENST00000534284 RHBDD1Q8TEB9 315 aa6.28□□□□□ -1.4
CYCSP28-201ENST00000534284 PIK3R5Q8WYR1 880 aa6.28□□□□□ -1.4
CYCSP28-201ENST00000534284 ITPKCQ96DU7 683 aa6.28□□□□□ -1.4
CYCSP28-201ENST00000534284 FHDC1Q9C0D6 1143 aaPredicted RBP6.28□□□□□ -1.4
CYCSP28-201ENST00000534284 METTL5Q9NRN9 209 aaKnown RBP6.28□□□□□ -1.4
CYCSP28-201ENST00000534284 SPG7Q9UQ90 795 aa6.28□□□□□ -1.4
CYCSP28-201ENST00000534284 GPATCH8Q9UKJ3 1502 aaKnown RBP6.28□□□□□ -1.4
CYCSP28-201ENST00000534284 ZNF608Q9ULD9 1512 aaPredicted RBP6.28□□□□□ -1.4
CYCSP28-201ENST00000534284 ERCC6Q03468 1493 aa6.28□□□□□ -1.4
CYCSP28-201ENST00000534284 MBD5Q9P267 1494 aa6.28□□□□□ -1.4
CYCSP28-201ENST00000534284 ARHGEF5Q12774 1597 aa6.27□□□□□ -1.41
CYCSP28-201ENST00000534284 UHRF1BP1Q6BDS2 1440 aa6.27□□□□□ -1.41
CYCSP28-201ENST00000534284 PLA2G4AP47712 749 aa6.27□□□□□ -1.41
CYCSP28-201ENST00000534284 ORC1Q13415 861 aa6.27□□□□□ -1.41
CYCSP28-201ENST00000534284 GNL2Q13823 731 aaKnown RBP6.27□□□□□ -1.41
CYCSP28-201ENST00000534284 NBPF1Q3BBV0 1214 aa6.27□□□□□ -1.41
CYCSP28-201ENST00000534284 C1orf53Q5VUE5 145 aa6.27□□□□□ -1.41
CYCSP28-201ENST00000534284 POTEAQ6S8J7 498 aa6.27□□□□□ -1.41
CYCSP28-201ENST00000534284 FBF1Q8TES7 1133 aa6.27□□□□□ -1.41
CYCSP28-201ENST00000534284 TANGO6Q9C0B7 1094 aa6.27□□□□□ -1.41
CYCSP28-201ENST00000534284 CAPN10Q9HC96 672 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms