RNA–Protein interactions for RNA: ENST00000533348.5

GSDMD-213, Transcript of gasdermin D, humanhuman

TSL 5

Gene GSDMD, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-213ENST00000533348 SCNN1DP51172 638 aa19.56■□□□□ 0.72
GSDMD-213ENST00000533348 SF3B3Q15393 1217 aaKnown RBP19.56■□□□□ 0.72
GSDMD-213ENST00000533348 CNTROBQ8N137 903 aa19.56■□□□□ 0.72
GSDMD-213ENST00000533348 FAM89AQ96GI7 184 aa19.56■□□□□ 0.72
GSDMD-213ENST00000533348 CHMP4AQ9BY43 222 aa19.56■□□□□ 0.72
GSDMD-213ENST00000533348 ZNRF3Q9ULT6 936 aa19.56■□□□□ 0.72
GSDMD-213ENST00000533348 TRPM7Q96QT4 1865 aa19.56■□□□□ 0.72
GSDMD-213ENST00000533348 ATP5J2-PTCD1G3V325 749 aa19.55■□□□□ 0.72
GSDMD-213ENST00000533348 MKRN1Q9UHC7 482 aaKnown RBP19.55■□□□□ 0.72
GSDMD-213ENST00000533348 CNTNAP1P78357 1384 aa19.55■□□□□ 0.72
GSDMD-213ENST00000533348 HSPA1AP0DMV8 641 aaKnown RBP19.54■□□□□ 0.72
GSDMD-213ENST00000533348 HSPA1BP0DMV9 641 aaKnown RBP19.54■□□□□ 0.72
GSDMD-213ENST00000533348 EPS15P42566 896 aa19.54■□□□□ 0.72
GSDMD-213ENST00000533348 GOLGA2Q08379 1002 aa19.54■□□□□ 0.72
GSDMD-213ENST00000533348 KIAA2012Q0VF49 1180 aa19.54■□□□□ 0.72
GSDMD-213ENST00000533348 MAP1SQ66K74 1059 aaPredicted RBP19.54■□□□□ 0.72
GSDMD-213ENST00000533348 USP50Q70EL3 339 aaPredicted RBP19.54■□□□□ 0.72
GSDMD-213ENST00000533348 RIC3Q7Z5B4 369 aa19.54■□□□□ 0.72
GSDMD-213ENST00000533348 ELL2O00472 640 aaPredicted RBP19.53■□□□□ 0.72
GSDMD-213ENST00000533348 CXCL9Q07325 125 aa19.53■□□□□ 0.72
GSDMD-213ENST00000533348 COL13A1Q5TAT6 717 aaPredicted RBP19.53■□□□□ 0.72
GSDMD-213ENST00000533348 PHAXQ9H814 394 aaKnown RBP19.53■□□□□ 0.72
GSDMD-213ENST00000533348 DUOX1Q9NRD9 1551 aa19.53■□□□□ 0.72
GSDMD-213ENST00000533348 ZNF316A6NFI3 1004 aaPredicted RBP19.52■□□□□ 0.72
GSDMD-213ENST00000533348 C8orf58Q8NAV2 365 aa19.52■□□□□ 0.72
GSDMD-213ENST00000533348 ZNF428Q96B54 188 aa19.52■□□□□ 0.72
GSDMD-213ENST00000533348 IRS4O14654 1257 aaPredicted RBP19.51■□□□□ 0.71
GSDMD-213ENST00000533348 HSP90B1P14625 803 aaKnown RBP19.51■□□□□ 0.71
GSDMD-213ENST00000533348 CCDC30Q5VVM6 783 aa19.51■□□□□ 0.71
GSDMD-213ENST00000533348 ZBTB38Q8NAP3 1195 aaPredicted RBP19.51■□□□□ 0.71
GSDMD-213ENST00000533348 GPRC5DQ9NZD1 345 aa19.51■□□□□ 0.71
GSDMD-213ENST00000533348 CACNA1FO60840 1977 aa19.51■□□□□ 0.71
GSDMD-213ENST00000533348 CDHR2Q9BYE9 1310 aa19.51■□□□□ 0.71
GSDMD-213ENST00000533348 TNIP1Q15025 636 aa19.5■□□□□ 0.71
GSDMD-213ENST00000533348 CCDC27Q2M243 656 aa19.5■□□□□ 0.71
GSDMD-213ENST00000533348 CIAPIN1Q6FI81 312 aa19.5■□□□□ 0.71
GSDMD-213ENST00000533348 CCDC191Q8NCU4 936 aa19.5■□□□□ 0.71
GSDMD-213ENST00000533348 CELF1Q92879 486 aaKnown RBP19.5■□□□□ 0.71
GSDMD-213ENST00000533348 ADARB2Q9NS39 739 aaKnown RBP19.5■□□□□ 0.71
GSDMD-213ENST00000533348 CCDC184Q52MB2 194 aa19.49■□□□□ 0.71
GSDMD-213ENST00000533348 RTL5Q5HYW3 569 aaPredicted RBP19.49■□□□□ 0.71
GSDMD-213ENST00000533348 MYH3P11055 1940 aa19.49■□□□□ 0.71
GSDMD-213ENST00000533348 RASSF10A6NK89 507 aa19.48■□□□□ 0.71
GSDMD-213ENST00000533348 DDX58O95786 925 aaKnown RBP19.48■□□□□ 0.71
GSDMD-213ENST00000533348 NCBP3Q53F19 620 aaKnown RBP19.48■□□□□ 0.71
GSDMD-213ENST00000533348 MYD88Q99836 296 aa19.48■□□□□ 0.71
GSDMD-213ENST00000533348 COL4A1P02462 1669 aa19.48■□□□□ 0.71
GSDMD-213ENST00000533348 PCCAP05165 728 aaPredicted RBP19.47■□□□□ 0.71
GSDMD-213ENST00000533348 VEGFBP49765 207 aa19.47■□□□□ 0.71
GSDMD-213ENST00000533348 GMPSP49915 693 aaPredicted RBP19.47■□□□□ 0.71
GSDMD-213ENST00000533348 RPS8P62241 208 aaKnown RBP19.47■□□□□ 0.71
GSDMD-213ENST00000533348 WASHC4Q2M389 1173 aa19.47■□□□□ 0.71
GSDMD-213ENST00000533348 DEFB115Q30KQ5 88 aa19.47■□□□□ 0.71
GSDMD-213ENST00000533348 METTL22Q9BUU2 404 aaPredicted RBP19.47■□□□□ 0.71
GSDMD-213ENST00000533348 NSFL1CQ9UNZ2 370 aaKnown RBP19.47■□□□□ 0.71
GSDMD-213ENST00000533348 YDJCA8MPS7 323 aa19.46■□□□□ 0.71
GSDMD-213ENST00000533348 RAD17O75943 681 aa19.46■□□□□ 0.71
GSDMD-213ENST00000533348 TSPYL6Q8N831 410 aa19.46■□□□□ 0.71
GSDMD-213ENST00000533348 CWC25Q9NXE8 425 aaPredicted RBP19.46■□□□□ 0.71
GSDMD-213ENST00000533348 PDE8AO60658 829 aa19.45■□□□□ 0.7
GSDMD-213ENST00000533348 GPSM2P81274 684 aa19.45■□□□□ 0.7
GSDMD-213ENST00000533348 WWC1Q8IX03 1113 aa19.45■□□□□ 0.7
GSDMD-213ENST00000533348 BCL2L13Q9BXK5 485 aa19.45■□□□□ 0.7
GSDMD-213ENST00000533348 PGAP2Q9UHJ9 254 aa19.45■□□□□ 0.7
GSDMD-213ENST00000533348 POLR2AP24928 1970 aaKnown RBP19.44■□□□□ 0.7
GSDMD-213ENST00000533348 KSR2Q6VAB6 950 aa19.44■□□□□ 0.7
GSDMD-213ENST00000533348 TNS4Q8IZW8 715 aa19.44■□□□□ 0.7
GSDMD-213ENST00000533348 EYA3Q99504 573 aa19.44■□□□□ 0.7
GSDMD-213ENST00000533348 POLLQ9UGP5 575 aa19.44■□□□□ 0.7
GSDMD-213ENST00000533348 IL16Q14005 1332 aa19.44■□□□□ 0.7
GSDMD-213ENST00000533348 C6orf229H3BNL8 230 aa19.43■□□□□ 0.7
GSDMD-213ENST00000533348 CCDC152Q4G0S7 254 aa19.43■□□□□ 0.7
GSDMD-213ENST00000533348 ZC3H15Q8WU90 426 aaKnown RBP19.43■□□□□ 0.7
GSDMD-213ENST00000533348 TSR2Q969E8 191 aaKnown RBP19.43■□□□□ 0.7
GSDMD-213ENST00000533348 STK31Q9BXU1 1019 aa19.43■□□□□ 0.7
GSDMD-213ENST00000533348 PODXL2Q9NZ53 605 aa19.43■□□□□ 0.7
GSDMD-213ENST00000533348 ABT1Q9ULW3 272 aaKnown RBP19.43■□□□□ 0.7
GSDMD-213ENST00000533348 MAP3K2Q9Y2U5 619 aa19.43■□□□□ 0.7
GSDMD-213ENST00000533348 TBC1D16Q8TBP0 767 aa19.42■□□□□ 0.7
GSDMD-213ENST00000533348 DPF2Q92785 391 aa19.42■□□□□ 0.7
GSDMD-213ENST00000533348 SEC31BQ9NQW1 1179 aa19.42■□□□□ 0.7
GSDMD-213ENST00000533348 CNOT7Q9UIV1 285 aaKnown RBP19.42■□□□□ 0.7
GSDMD-213ENST00000533348 SCN9AQ15858 1988 aa19.42■□□□□ 0.7
GSDMD-213ENST00000533348 PSME4Q14997 1843 aa19.41■□□□□ 0.7
GSDMD-213ENST00000533348 PI4KAP2A4QPH2 592 aa19.41■□□□□ 0.7
GSDMD-213ENST00000533348 H7C1D1 291 aa19.41■□□□□ 0.7
GSDMD-213ENST00000533348 RIMBP2O15034 1052 aa19.41■□□□□ 0.7
GSDMD-213ENST00000533348 FMR1Q06787 632 aaKnown RBP eCLIP19.41■□□□□ 0.7
GSDMD-213ENST00000533348 TWISTNBQ3B726 338 aaPredicted RBP19.41■□□□□ 0.7
GSDMD-213ENST00000533348 CST9Q5W186 159 aa19.41■□□□□ 0.7
GSDMD-213ENST00000533348 PI4KAP1Q8N8J0 262 aa19.41■□□□□ 0.7
GSDMD-213ENST00000533348 DBNDD1Q9H9R9 158 aa19.41■□□□□ 0.7
GSDMD-213ENST00000533348 WDR33Q9C0J8 1336 aaKnown RBP19.41■□□□□ 0.7
GSDMD-213ENST00000533348 TRAF5O00463 557 aa19.4■□□□□ 0.7
GSDMD-213ENST00000533348 PSMD14O00487 310 aa19.4■□□□□ 0.7
GSDMD-213ENST00000533348 FOXN1O15353 648 aa19.4■□□□□ 0.7
GSDMD-213ENST00000533348 HIRAP54198 1017 aaPredicted RBP19.4■□□□□ 0.7
GSDMD-213ENST00000533348 ZC3H12CQ9C0D7 883 aaKnown RBP19.4■□□□□ 0.7
GSDMD-213ENST00000533348 MRS2Q9HD23 443 aa19.4■□□□□ 0.7
GSDMD-213ENST00000533348 WBP1LQ9NX94 342 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms