RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 TAF1P21675 1872 aa26.03■■□□□ 1.76
CCS-208ENST00000533244 FKBP4Q02790 459 aaKnown RBP eCLIP26.03■■□□□ 1.76
CCS-208ENST00000533244 PTPRCP08575 1304 aa26.03■■□□□ 1.76
CCS-208ENST00000533244 COL4A1P02462 1669 aa26.02■■□□□ 1.76
CCS-208ENST00000533244 TIAM2Q8IVF5 1701 aa26.02■■□□□ 1.76
CCS-208ENST00000533244 BBOX1O75936 387 aa26.02■■□□□ 1.76
CCS-208ENST00000533244 CASP7P55210 303 aa26.02■■□□□ 1.76
CCS-208ENST00000533244 SLC51AQ86UW1 340 aa26.02■■□□□ 1.76
CCS-208ENST00000533244 ATP6V0A2Q9Y487 856 aa26.02■■□□□ 1.76
CCS-208ENST00000533244 LRRC37AA6NMS7 1700 aa26.01■■□□□ 1.75
CCS-208ENST00000533244 GRIPAP1Q4V328 841 aa26.01■■□□□ 1.75
CCS-208ENST00000533244 BCL2L13Q9BXK5 485 aa26.01■■□□□ 1.75
CCS-208ENST00000533244 MYH3P11055 1940 aa26■■□□□ 1.75
CCS-208ENST00000533244 BRPF1P55201 1214 aaPredicted RBP26■■□□□ 1.75
CCS-208ENST00000533244 PSMD1Q99460 953 aa26■■□□□ 1.75
CCS-208ENST00000533244 SMC4Q9NTJ3 1288 aa26■■□□□ 1.75
CCS-208ENST00000533244 UBE3BQ7Z3V4 1068 aa25.99■■□□□ 1.75
CCS-208ENST00000533244 TMC4Q7Z404 712 aa25.98■■□□□ 1.75
CCS-208ENST00000533244 CELF1Q92879 486 aaKnown RBP25.98■■□□□ 1.75
CCS-208ENST00000533244 PLA2G12BQ9BX93 195 aa25.98■■□□□ 1.75
CCS-208ENST00000533244 ALDH1L1O75891 902 aa25.97■■□□□ 1.75
CCS-208ENST00000533244 RARSP54136 660 aaKnown RBP25.97■■□□□ 1.75
CCS-208ENST00000533244 CTSWP56202 376 aa25.97■■□□□ 1.75
CCS-208ENST00000533244 CCDC152Q4G0S7 254 aa25.97■■□□□ 1.75
CCS-208ENST00000533244 SP8Q8IXZ3 490 aa25.97■■□□□ 1.75
CCS-208ENST00000533244 RTL9Q8NET4 1388 aa25.96■■□□□ 1.75
CCS-208ENST00000533244 TTLL11Q8NHH1 800 aa25.96■■□□□ 1.75
CCS-208ENST00000533244 SRCIN1Q9C0H9 1055 aa25.96■■□□□ 1.75
CCS-208ENST00000533244 SLC4A10Q6U841 1118 aa25.95■■□□□ 1.74
CCS-208ENST00000533244 SEC31BQ9NQW1 1179 aa25.95■■□□□ 1.74
CCS-208ENST00000533244 ZNF277Q9NRM2 450 aaPredicted RBP25.95■■□□□ 1.74
CCS-208ENST00000533244 GPBP1L1Q9HC44 474 aaPredicted RBP25.94■■□□□ 1.74
CCS-208ENST00000533244 GRM8O00222 908 aa25.93■■□□□ 1.74
CCS-208ENST00000533244 RPS8P62241 208 aaKnown RBP25.93■■□□□ 1.74
CCS-208ENST00000533244 ZNF526Q8TF50 670 aaPredicted RBP25.93■■□□□ 1.74
CCS-208ENST00000533244 RTFDC1Q9BY42 306 aaPredicted RBP25.93■■□□□ 1.74
CCS-208ENST00000533244 DUOX1Q9NRD9 1551 aa25.92■■□□□ 1.74
CCS-208ENST00000533244 IARSP41252 1262 aaKnown RBP25.92■■□□□ 1.74
CCS-208ENST00000533244 TMX4Q9H1E5 349 aaPredicted RBP25.92■■□□□ 1.74
CCS-208ENST00000533244 LTBP1Q14766 1721 aa25.92■■□□□ 1.74
CCS-208ENST00000533244 CSF1RP07333 972 aa25.91■■□□□ 1.74
CCS-208ENST00000533244 CCDC85AQ96PX6 553 aaPredicted RBP25.91■■□□□ 1.74
CCS-208ENST00000533244 GREM2Q9H772 168 aa25.9■■□□□ 1.74
CCS-208ENST00000533244 NOB1Q9ULX3 412 aaKnown RBP25.9■■□□□ 1.74
CCS-208ENST00000533244 COL4A5P29400 1685 aa25.9■■□□□ 1.74
CCS-208ENST00000533244 UTYO14607 1347 aa25.9■■□□□ 1.74
CCS-208ENST00000533244 KIF16BQ96L93 1317 aa25.89■■□□□ 1.74
CCS-208ENST00000533244 GLTPD2A6NH11 291 aa25.88■■□□□ 1.73
CCS-208ENST00000533244 FOXO4P98177 505 aa25.88■■□□□ 1.73
CCS-208ENST00000533244 DPP8Q6V1X1 898 aaPredicted RBP25.88■■□□□ 1.73
CCS-208ENST00000533244 MPNDQ8N594 471 aa25.88■■□□□ 1.73
CCS-208ENST00000533244 KDM2BQ8NHM5 1336 aa25.88■■□□□ 1.73
CCS-208ENST00000533244 VPS33BQ9H267 617 aa25.88■■□□□ 1.73
CCS-208ENST00000533244 C9orf78Q9NZ63 289 aaPredicted RBP25.88■■□□□ 1.73
CCS-208ENST00000533244 SUPT20HQ8NEM7 779 aa25.87■■□□□ 1.73
CCS-208ENST00000533244 ARHGAP45Q92619 1136 aa25.87■■□□□ 1.73
CCS-208ENST00000533244 CDC5LQ99459 802 aaKnown RBP25.87■■□□□ 1.73
CCS-208ENST00000533244 API5Q9BZZ5 524 aaKnown RBP25.87■■□□□ 1.73
CCS-208ENST00000533244 KIF3CO14782 793 aa25.86■■□□□ 1.73
CCS-208ENST00000533244 ANKRD18AQ8IVF6 992 aa25.86■■□□□ 1.73
CCS-208ENST00000533244 FZD9O00144 591 aa25.85■■□□□ 1.73
CCS-208ENST00000533244 NBPF7P0C2Y1 421 aaPredicted RBP25.85■■□□□ 1.73
CCS-208ENST00000533244 FAM161AQ3B820 660 aa25.85■■□□□ 1.73
CCS-208ENST00000533244 EPHA10Q5JZY3 1008 aa25.85■■□□□ 1.73
CCS-208ENST00000533244 NMRK2Q9NPI5 230 aa25.85■■□□□ 1.73
CCS-208ENST00000533244 WDR90Q96KV7 1748 aa25.84■■□□□ 1.73
CCS-208ENST00000533244 GPSM2P81274 684 aa25.84■■□□□ 1.73
CCS-208ENST00000533244 KAZALD1Q96I82 304 aa25.84■■□□□ 1.73
CCS-208ENST00000533244 PODXL2Q9NZ53 605 aa25.84■■□□□ 1.73
CCS-208ENST00000533244 BCAR3O75815 825 aa25.83■■□□□ 1.73
CCS-208ENST00000533244 ITGA6P23229 1130 aa25.83■■□□□ 1.73
CCS-208ENST00000533244 SPEF2Q9C093 1822 aa25.83■■□□□ 1.73
CCS-208ENST00000533244 PPIP5K2O43314 1243 aa25.82■■□□□ 1.72
CCS-208ENST00000533244 CCT4P50991 539 aaKnown RBP25.82■■□□□ 1.72
CCS-208ENST00000533244 KIAA2012Q0VF49 1180 aa25.82■■□□□ 1.72
CCS-208ENST00000533244 AOC3Q16853 763 aa25.82■■□□□ 1.72
CCS-208ENST00000533244 DPY19L2Q6NUT2 758 aa25.82■■□□□ 1.72
CCS-208ENST00000533244 LARGE2Q8N3Y3 721 aa25.82■■□□□ 1.72
CCS-208ENST00000533244 SUCLG2Q96I99 432 aa25.82■■□□□ 1.72
CCS-208ENST00000533244 USP44Q9H0E7 712 aa25.82■■□□□ 1.72
CCS-208ENST00000533244 BSDC1Q9NW68 430 aaPredicted RBP25.82■■□□□ 1.72
CCS-208ENST00000533244 NSFL1CQ9UNZ2 370 aaKnown RBP25.82■■□□□ 1.72
CCS-208ENST00000533244 JDP2Q8WYK2 163 aa25.81■■□□□ 1.72
CCS-208ENST00000533244 ZNF541Q9H0D2 1346 aa25.81■■□□□ 1.72
CCS-208ENST00000533244 LMBR1LQ6UX01 489 aa25.8■■□□□ 1.72
CCS-208ENST00000533244 POLLQ9UGP5 575 aa25.8■■□□□ 1.72
CCS-208ENST00000533244 TBC1D16Q8TBP0 767 aa25.8■■□□□ 1.72
CCS-208ENST00000533244 DDNO94850 711 aaPredicted RBP25.79■■□□□ 1.72
CCS-208ENST00000533244 RABL6Q3YEC7 729 aaPredicted RBP25.79■■□□□ 1.72
CCS-208ENST00000533244 XDHP47989 1333 aa25.78■■□□□ 1.72
CCS-208ENST00000533244 ANKRD18BA2A2Z9 1011 aa25.78■■□□□ 1.72
CCS-208ENST00000533244 POTECB2RU33 542 aa25.78■■□□□ 1.72
CCS-208ENST00000533244 IPO8O15397 1037 aaKnown RBP25.78■■□□□ 1.72
CCS-208ENST00000533244 IGHMBP2P38935 993 aaKnown RBP25.78■■□□□ 1.72
CCS-208ENST00000533244 NIM1KQ8IY84 436 aa25.78■■□□□ 1.72
CCS-208ENST00000533244 RRAGCQ9HB90 399 aa25.78■■□□□ 1.72
CCS-208ENST00000533244 MINPP1Q9UNW1 487 aa25.78■■□□□ 1.72
CCS-208ENST00000533244 TRIM27P14373 513 aa25.77■■□□□ 1.72
CCS-208ENST00000533244 IFIT5Q13325 482 aaKnown RBP25.77■■□□□ 1.72
CCS-208ENST00000533244 INTS3Q68E01 1043 aaKnown RBP25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms