RNA–Protein interactions for RNA: ENST00000533063.5

GSDMD-212, Transcript of gasdermin D, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSDMD, Length 1,800 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-212ENST00000533063 ERFEQ4G0M1 354 aa25.09■■□□□ 1.61
GSDMD-212ENST00000533063 DEFB132Q7Z7B7 95 aa25.09■■□□□ 1.61
GSDMD-212ENST00000533063 ZNF594Q96JF6 807 aaPredicted RBP25.09■■□□□ 1.61
GSDMD-212ENST00000533063 COL23A1Q86Y22 540 aaPredicted RBP25.09■■□□□ 1.61
GSDMD-212ENST00000533063 ZBTB47Q9UFB7 747 aaPredicted RBP25.09■■□□□ 1.61
GSDMD-212ENST00000533063 ABCC12Q96J65 1359 aa25.08■■□□□ 1.61
GSDMD-212ENST00000533063 G3BP1Q13283 466 aaKnown RBP eCLIP25.08■■□□□ 1.61
GSDMD-212ENST00000533063 OS9Q13438 667 aaPredicted RBP25.08■■□□□ 1.61
GSDMD-212ENST00000533063 PNPLA7Q6ZV29 1317 aa25.08■■□□□ 1.6
GSDMD-212ENST00000533063 ATG9AQ7Z3C6 839 aa25.07■■□□□ 1.6
GSDMD-212ENST00000533063 ERC1Q8IUD2 1116 aa25.07■■□□□ 1.6
GSDMD-212ENST00000533063 QSER1Q2KHR3 1735 aa25.07■■□□□ 1.6
GSDMD-212ENST00000533063 CARMIL3Q8ND23 1372 aa25.06■■□□□ 1.6
GSDMD-212ENST00000533063 ITGA6P23229 1130 aa25.06■■□□□ 1.6
GSDMD-212ENST00000533063 CCDC57Q2TAC2 916 aa25.06■■□□□ 1.6
GSDMD-212ENST00000533063 SLC10A5Q5PT55 438 aa25.06■■□□□ 1.6
GSDMD-212ENST00000533063 C3orf67Q6ZVT6 689 aa25.06■■□□□ 1.6
GSDMD-212ENST00000533063 TSHZ2Q9NRE2 1034 aa25.06■■□□□ 1.6
GSDMD-212ENST00000533063 COL4A1P02462 1669 aa25.06■■□□□ 1.6
GSDMD-212ENST00000533063 TM4SF1P30408 202 aa25.05■■□□□ 1.6
GSDMD-212ENST00000533063 BAG6P46379 1132 aa25.05■■□□□ 1.6
GSDMD-212ENST00000533063 NBPF5PQ86XG9 351 aaPredicted RBP25.05■■□□□ 1.6
GSDMD-212ENST00000533063 LRP5O75197 1615 aa25.05■■□□□ 1.6
GSDMD-212ENST00000533063 IFIT5Q13325 482 aaKnown RBP25.05■■□□□ 1.6
GSDMD-212ENST00000533063 C8orf34Q49A92 452 aa25.05■■□□□ 1.6
GSDMD-212ENST00000533063 LRRC24Q50LG9 513 aa25.05■■□□□ 1.6
GSDMD-212ENST00000533063 PUS3Q9BZE2 481 aaKnown RBP25.05■■□□□ 1.6
GSDMD-212ENST00000533063 NYXQ9GZU5 481 aa25.05■■□□□ 1.6
GSDMD-212ENST00000533063 OSBPL3Q9H4L5 887 aa25.05■■□□□ 1.6
GSDMD-212ENST00000533063 TNRC6CQ9HCJ0 1690 aaKnown RBP25.04■■□□□ 1.6
GSDMD-212ENST00000533063 PDE1AP54750 535 aa25.04■■□□□ 1.6
GSDMD-212ENST00000533063 SF3B2Q13435 895 aaKnown RBP25.04■■□□□ 1.6
GSDMD-212ENST00000533063 TAF1P21675 1872 aa25.04■■□□□ 1.6
GSDMD-212ENST00000533063 EYA2O00167 538 aa25.03■■□□□ 1.6
GSDMD-212ENST00000533063 RTL9Q8NET4 1388 aa25.03■■□□□ 1.6
GSDMD-212ENST00000533063 GSPT1P15170 499 aaKnown RBP25.02■■□□□ 1.6
GSDMD-212ENST00000533063 SLC15A2Q16348 729 aa25.02■■□□□ 1.6
GSDMD-212ENST00000533063 TPTE2Q6XPS3 522 aa25.02■■□□□ 1.6
GSDMD-212ENST00000533063 SPEF2Q9C093 1822 aa25.02■■□□□ 1.6
GSDMD-212ENST00000533063 CIAO1O76071 339 aa25.02■■□□□ 1.6
GSDMD-212ENST00000533063 TFCP2Q12800 502 aa25.02■■□□□ 1.6
GSDMD-212ENST00000533063 TSHZ3Q63HK5 1081 aa25.02■■□□□ 1.6
GSDMD-212ENST00000533063 CCDC24Q8N4L8 307 aa25.02■■□□□ 1.6
GSDMD-212ENST00000533063 FLAD1Q8NFF5 587 aa25.02■■□□□ 1.6
GSDMD-212ENST00000533063 EAF2Q96CJ1 260 aaPredicted RBP25.02■■□□□ 1.6
GSDMD-212ENST00000533063 BACH2Q9BYV9 841 aa25.02■■□□□ 1.6
GSDMD-212ENST00000533063 HSP90B1P14625 803 aaKnown RBP25.01■■□□□ 1.59
GSDMD-212ENST00000533063 MX1P20591 662 aa25.01■■□□□ 1.59
GSDMD-212ENST00000533063 DDR1Q08345 913 aa25.01■■□□□ 1.59
GSDMD-212ENST00000533063 STAP2Q9UGK3 403 aa25.01■■□□□ 1.59
GSDMD-212ENST00000533063 ANKRD18BA2A2Z9 1011 aa25■■□□□ 1.59
GSDMD-212ENST00000533063 BMP2KLQ5H9B9 411 aa25■■□□□ 1.59
GSDMD-212ENST00000533063 CLASRPQ8N2M8 674 aaKnown RBP25■■□□□ 1.59
GSDMD-212ENST00000533063 SEC31BQ9NQW1 1179 aa25■■□□□ 1.59
GSDMD-212ENST00000533063 IL15P40933 162 aaPredicted RBP25■■□□□ 1.59
GSDMD-212ENST00000533063 SF3B3Q15393 1217 aaKnown RBP25■■□□□ 1.59
GSDMD-212ENST00000533063 TTC22Q5TAA0 569 aa25■■□□□ 1.59
GSDMD-212ENST00000533063 FBXO3Q9UK99 471 aa25■■□□□ 1.59
GSDMD-212ENST00000533063 GTF2E1P29083 439 aaPredicted RBP24.99■■□□□ 1.59
GSDMD-212ENST00000533063 CCDC152Q4G0S7 254 aa24.99■■□□□ 1.59
GSDMD-212ENST00000533063 NRXN2Q9P2S2 1712 aa24.99■■□□□ 1.59
GSDMD-212ENST00000533063 POLRMTO00411 1230 aaKnown RBP24.98■■□□□ 1.59
GSDMD-212ENST00000533063 PRR5LQ6MZQ0 368 aa24.98■■□□□ 1.59
GSDMD-212ENST00000533063 RIPOR2Q9Y4F9 1068 aa24.98■■□□□ 1.59
GSDMD-212ENST00000533063 RIC1Q4ADV7 1423 aa24.98■■□□□ 1.59
GSDMD-212ENST00000533063 AACSQ86V21 672 aa24.98■■□□□ 1.59
GSDMD-212ENST00000533063 CCDC125Q86Z20 511 aa24.98■■□□□ 1.59
GSDMD-212ENST00000533063 MSH5O43196 834 aa24.97■■□□□ 1.59
GSDMD-212ENST00000533063 CNBD1Q8NA66 436 aa24.97■■□□□ 1.59
GSDMD-212ENST00000533063 STK32BQ9NY57 414 aa24.97■■□□□ 1.59
GSDMD-212ENST00000533063 TLR7Q9NYK1 1049 aaKnown RBP24.97■■□□□ 1.59
GSDMD-212ENST00000533063 SERPINB2P05120 415 aa24.96■■□□□ 1.59
GSDMD-212ENST00000533063 TNNI3KQ59H18 835 aa24.96■■□□□ 1.59
GSDMD-212ENST00000533063 TAF7LQ5H9L4 462 aa24.96■■□□□ 1.59
GSDMD-212ENST00000533063 FPGT-TNNI3KV9GXZ4 949 aa24.96■■□□□ 1.59
GSDMD-212ENST00000533063 LDHAL6AQ6ZMR3 332 aa24.96■■□□□ 1.59
GSDMD-212ENST00000533063 NLGN1Q8N2Q7 840 aa24.96■■□□□ 1.59
GSDMD-212ENST00000533063 PI4K2BQ8TCG2 481 aa24.96■■□□□ 1.59
GSDMD-212ENST00000533063 CCDC8Q9H0W5 538 aaPredicted RBP24.95■■□□□ 1.58
GSDMD-212ENST00000533063 AOX1Q06278 1338 aa24.94■■□□□ 1.58
GSDMD-212ENST00000533063 ANKRD31Q8N7Z5 1873 aa24.94■■□□□ 1.58
GSDMD-212ENST00000533063 IFIT2P09913 472 aaKnown RBP24.93■■□□□ 1.58
GSDMD-212ENST00000533063 NLRP3Q96P20 1036 aa24.93■■□□□ 1.58
GSDMD-212ENST00000533063 ZNF609O15014 1411 aa24.93■■□□□ 1.58
GSDMD-212ENST00000533063 VGLL2Q8N8G2 317 aa24.93■■□□□ 1.58
GSDMD-212ENST00000533063 GPR108Q9NPR9 543 aa24.93■■□□□ 1.58
GSDMD-212ENST00000533063 DBNLQ9UJU6 430 aaKnown RBP24.93■■□□□ 1.58
GSDMD-212ENST00000533063 A0A1B0GUL6 1792 aa24.93■■□□□ 1.58
GSDMD-212ENST00000533063 PDGFDQ9GZP0 370 aaPredicted RBP24.92■■□□□ 1.58
GSDMD-212ENST00000533063 TTC41PQ6P2S7 1318 aa24.91■■□□□ 1.58
GSDMD-212ENST00000533063 SDSP20132 328 aa24.91■■□□□ 1.58
GSDMD-212ENST00000533063 CNNM1Q9NRU3 951 aa24.91■■□□□ 1.58
GSDMD-212ENST00000533063 MSL1Q68DK7 614 aa24.91■■□□□ 1.58
GSDMD-212ENST00000533063 NPHP1O15259 732 aa24.9■■□□□ 1.58
GSDMD-212ENST00000533063 CEP126Q9P2H0 1117 aa24.9■■□□□ 1.58
GSDMD-212ENST00000533063 AK9Q5TCS8 1911 aa24.89■■□□□ 1.58
GSDMD-212ENST00000533063 TIMM10P62072 90 aa24.89■■□□□ 1.58
GSDMD-212ENST00000533063 DBNDD2Q9BQY9 259 aa24.89■■□□□ 1.58
GSDMD-212ENST00000533063 ECHDC1Q9NTX5 307 aa24.89■■□□□ 1.58
GSDMD-212ENST00000533063 SEC24BO95487 1268 aa24.89■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms