RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 CCDC27Q2M243 656 aa7.94□□□□□ -1.14
TGFBR3-209ENST00000532540 ERO1AQ96HE7 468 aa7.94□□□□□ -1.14
TGFBR3-209ENST00000532540 GEMIN8Q9NWZ8 242 aaKnown RBP7.94□□□□□ -1.14
TGFBR3-209ENST00000532540 QRICH2Q9H0J4 1663 aa7.94□□□□□ -1.14
TGFBR3-209ENST00000532540 TECPR2O15040 1411 aa7.94□□□□□ -1.14
TGFBR3-209ENST00000532540 KDM5AP29375 1690 aaKnown RBP7.94□□□□□ -1.14
TGFBR3-209ENST00000532540 IGSF1Q8N6C5 1336 aa7.94□□□□□ -1.14
TGFBR3-209ENST00000532540 ERLIN1O75477 346 aa7.94□□□□□ -1.14
TGFBR3-209ENST00000532540 MYCNP04198 464 aaPredicted RBP7.94□□□□□ -1.14
TGFBR3-209ENST00000532540 RARSP54136 660 aaKnown RBP7.94□□□□□ -1.14
TGFBR3-209ENST00000532540 SLC20A2Q08357 652 aa7.94□□□□□ -1.14
TGFBR3-209ENST00000532540 YY1AP1Q9H869 796 aa7.94□□□□□ -1.14
TGFBR3-209ENST00000532540 TRMT112Q9UI30 125 aaKnown RBP7.94□□□□□ -1.14
TGFBR3-209ENST00000532540 DDX41Q9UJV9 622 aaKnown RBP7.94□□□□□ -1.14
TGFBR3-209ENST00000532540 PNPLA6Q8IY17 1366 aa7.94□□□□□ -1.14
TGFBR3-209ENST00000532540 KDM4AO75164 1064 aa7.94□□□□□ -1.14
TGFBR3-209ENST00000532540 CDR1P51861 262 aa7.94□□□□□ -1.14
TGFBR3-209ENST00000532540 PROSER3Q2NL68 480 aa7.94□□□□□ -1.14
TGFBR3-209ENST00000532540 UBE3BQ7Z3V4 1068 aa7.94□□□□□ -1.14
TGFBR3-209ENST00000532540 DDX11Q96FC9 970 aa7.94□□□□□ -1.14
TGFBR3-209ENST00000532540 NCAPGQ9BPX3 1015 aa7.94□□□□□ -1.14
TGFBR3-209ENST00000532540 ANO2Q9NQ90 1003 aa7.94□□□□□ -1.14
TGFBR3-209ENST00000532540 TRMT1Q9NXH9 659 aaKnown RBP7.94□□□□□ -1.14
TGFBR3-209ENST00000532540 ATF5Q9Y2D1 282 aaPredicted RBP7.94□□□□□ -1.14
TGFBR3-209ENST00000532540 JRKLQ9Y4A0 524 aa7.94□□□□□ -1.14
TGFBR3-209ENST00000532540 POTEAQ6S8J7 498 aa7.93□□□□□ -1.14
TGFBR3-209ENST00000532540 ZNF526Q8TF50 670 aaPredicted RBP7.93□□□□□ -1.14
TGFBR3-209ENST00000532540 PPM1EQ8WY54 764 aa7.93□□□□□ -1.14
TGFBR3-209ENST00000532540 API5Q9BZZ5 524 aaKnown RBP7.93□□□□□ -1.14
TGFBR3-209ENST00000532540 TMX4Q9H1E5 349 aaPredicted RBP7.93□□□□□ -1.14
TGFBR3-209ENST00000532540 GDPD2Q9HCC8 539 aa7.93□□□□□ -1.14
TGFBR3-209ENST00000532540 HMMRO75330 724 aa7.93□□□□□ -1.14
TGFBR3-209ENST00000532540 BMP2KLQ5H9B9 411 aa7.93□□□□□ -1.14
TGFBR3-209ENST00000532540 CHMP4CQ96CF2 233 aa7.93□□□□□ -1.14
TGFBR3-209ENST00000532540 SRCIN1Q9C0H9 1055 aa7.93□□□□□ -1.14
TGFBR3-209ENST00000532540 TNMDQ9H2S6 317 aa7.93□□□□□ -1.14
TGFBR3-209ENST00000532540 TMEM63CQ9P1W3 806 aa7.93□□□□□ -1.14
TGFBR3-209ENST00000532540 CLIP2Q9UDT6 1046 aa7.93□□□□□ -1.14
TGFBR3-209ENST00000532540 PPLO60437 1756 aa7.93□□□□□ -1.14
TGFBR3-209ENST00000532540 A0A087WZG4 1122 aa7.93□□□□□ -1.14
TGFBR3-209ENST00000532540 LOC102724428A0A0B4J2F2 783 aa7.93□□□□□ -1.14
TGFBR3-209ENST00000532540 CAPN2P17655 700 aa7.93□□□□□ -1.14
TGFBR3-209ENST00000532540 SIK1P57059 783 aa7.93□□□□□ -1.14
TGFBR3-209ENST00000532540 SYCP1Q15431 976 aa7.93□□□□□ -1.14
TGFBR3-209ENST00000532540 MAP3K11Q16584 847 aa7.93□□□□□ -1.14
TGFBR3-209ENST00000532540 LRCH2Q5VUJ6 765 aa7.93□□□□□ -1.14
TGFBR3-209ENST00000532540 NEK11Q8NG66 645 aa7.93□□□□□ -1.14
TGFBR3-209ENST00000532540 CCDC102AQ96A19 550 aa7.93□□□□□ -1.14
TGFBR3-209ENST00000532540 NUP62CLQ9H1M0 184 aa7.93□□□□□ -1.14
TGFBR3-209ENST00000532540 DBF4Q9UBU7 674 aaPredicted RBP7.93□□□□□ -1.14
TGFBR3-209ENST00000532540 SURF6O75683 361 aaKnown RBP7.92□□□□□ -1.14
TGFBR3-209ENST00000532540 SMC2O95347 1197 aa7.92□□□□□ -1.14
TGFBR3-209ENST00000532540 PTGS1P23219 599 aa7.92□□□□□ -1.14
TGFBR3-209ENST00000532540 DHX8Q14562 1220 aaKnown RBP7.92□□□□□ -1.14
TGFBR3-209ENST00000532540 ATF7IPQ6VMQ6 1270 aa7.92□□□□□ -1.14
TGFBR3-209ENST00000532540 FAM196AQ6ZSG2 479 aa7.92□□□□□ -1.14
TGFBR3-209ENST00000532540 DZIP3Q86Y13 1208 aaKnown RBP7.92□□□□□ -1.14
TGFBR3-209ENST00000532540 NUTM1Q86Y26 1132 aa7.92□□□□□ -1.14
TGFBR3-209ENST00000532540 MICALL1Q8N3F8 863 aa7.92□□□□□ -1.14
TGFBR3-209ENST00000532540 PLEKHF1Q96S99 279 aa7.92□□□□□ -1.14
TGFBR3-209ENST00000532540 NIP7Q9Y221 180 aaKnown RBP eCLIP7.92□□□□□ -1.14
TGFBR3-209ENST00000532540 RTCBQ9Y3I0 505 aaKnown RBP7.92□□□□□ -1.14
TGFBR3-209ENST00000532540 SETBP1Q9Y6X0 1596 aa7.92□□□□□ -1.14
TGFBR3-209ENST00000532540 TTLL7Q6ZT98 887 aa7.92□□□□□ -1.14
TGFBR3-209ENST00000532540 ANKRD13DQ6ZTN6 518 aa7.92□□□□□ -1.14
TGFBR3-209ENST00000532540 IL1RAPL2Q9NP60 686 aa7.92□□□□□ -1.14
TGFBR3-209ENST00000532540 ZBTB1Q9Y2K1 713 aa7.92□□□□□ -1.14
TGFBR3-209ENST00000532540 TRIM27P14373 513 aa7.92□□□□□ -1.14
TGFBR3-209ENST00000532540 RAD51AP2Q09MP3 1159 aa7.92□□□□□ -1.14
TGFBR3-209ENST00000532540 TBC1D9Q6ZT07 1266 aa7.92□□□□□ -1.14
TGFBR3-209ENST00000532540 FAM89AQ96GI7 184 aa7.92□□□□□ -1.14
TGFBR3-209ENST00000532540 URI1O94763 535 aaPredicted RBP7.91□□□□□ -1.14
TGFBR3-209ENST00000532540 ELF2Q15723 593 aa7.91□□□□□ -1.14
TGFBR3-209ENST00000532540 ARFGAP3Q9NP61 516 aa7.91□□□□□ -1.14
TGFBR3-209ENST00000532540 EXOC6BQ9Y2D4 811 aa7.91□□□□□ -1.14
TGFBR3-209ENST00000532540 CEP83Q9Y592 693 aa7.91□□□□□ -1.14
TGFBR3-209ENST00000532540 NEURL4Q96JN8 1562 aa7.91□□□□□ -1.14
TGFBR3-209ENST00000532540 VAMP4O75379 141 aa7.91□□□□□ -1.14
TGFBR3-209ENST00000532540 ZBTB7AO95365 584 aa7.91□□□□□ -1.14
TGFBR3-209ENST00000532540 BAG6P46379 1132 aa7.91□□□□□ -1.14
TGFBR3-209ENST00000532540 ARHGAP29Q52LW3 1261 aa7.91□□□□□ -1.14
TGFBR3-209ENST00000532540 ZNF710Q8N1W2 664 aa7.91□□□□□ -1.14
TGFBR3-209ENST00000532540 FEZ2Q9UHY8 353 aaPredicted RBP7.91□□□□□ -1.14
TGFBR3-209ENST00000532540 CTNNA3Q9UI47 895 aa7.91□□□□□ -1.14
TGFBR3-209ENST00000532540 SPATA31A1Q5TZJ5 1347 aa7.91□□□□□ -1.14
TGFBR3-209ENST00000532540 SPATA31A6Q5VVP1 1343 aa7.91□□□□□ -1.14
TGFBR3-209ENST00000532540 MX1P20591 662 aa7.91□□□□□ -1.14
TGFBR3-209ENST00000532540 NF2P35240 595 aa7.91□□□□□ -1.14
TGFBR3-209ENST00000532540 SNW1Q13573 536 aaKnown RBP7.91□□□□□ -1.14
TGFBR3-209ENST00000532540 GBP6Q6ZN66 633 aa7.91□□□□□ -1.14
TGFBR3-209ENST00000532540 RILPL2Q969X0 211 aa7.91□□□□□ -1.14
TGFBR3-209ENST00000532540 SRP68Q9UHB9 627 aaKnown RBP7.91□□□□□ -1.14
TGFBR3-209ENST00000532540 MED14O60244 1454 aa7.9□□□□□ -1.14
TGFBR3-209ENST00000532540 AATKQ6ZMQ8 1374 aa7.9□□□□□ -1.14
TGFBR3-209ENST00000532540 MYO1CO00159 1063 aa7.9□□□□□ -1.14
TGFBR3-209ENST00000532540 CCDC172P0C7W6 258 aa7.9□□□□□ -1.14
TGFBR3-209ENST00000532540 RLBP1P12271 317 aa7.9□□□□□ -1.14
TGFBR3-209ENST00000532540 NBPF5PQ86XG9 351 aaPredicted RBP7.9□□□□□ -1.14
TGFBR3-209ENST00000532540 PLCD4Q9BRC7 762 aa7.9□□□□□ -1.14
TGFBR3-209ENST00000532540 NAT10Q9H0A0 1025 aaKnown RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 201.3 ms