RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 MYCNP04198 464 aaPredicted RBP18.52■□□□□ 0.56
PPFIA1-222ENST00000532504 KRT18P05783 430 aaKnown RBP18.52■□□□□ 0.56
PPFIA1-222ENST00000532504 TCIRG1Q13488 830 aa18.52■□□□□ 0.56
PPFIA1-222ENST00000532504 RAB11FIP4Q86YS3 637 aa18.52■□□□□ 0.56
PPFIA1-222ENST00000532504 GLI2P10070 1586 aa18.52■□□□□ 0.56
PPFIA1-222ENST00000532504 LMOD1P29536 600 aaPredicted RBP18.52■□□□□ 0.55
PPFIA1-222ENST00000532504 PDE1AP54750 535 aa18.52■□□□□ 0.55
PPFIA1-222ENST00000532504 VAT1LQ9HCJ6 419 aa18.52■□□□□ 0.55
PPFIA1-222ENST00000532504 STX8Q9UNK0 236 aa18.52■□□□□ 0.55
PPFIA1-222ENST00000532504 PIGBQ92521 554 aa18.52■□□□□ 0.55
PPFIA1-222ENST00000532504 SUCLG2Q96I99 432 aa18.52■□□□□ 0.55
PPFIA1-222ENST00000532504 PRAMEF22A3QJZ6 481 aa18.51■□□□□ 0.55
PPFIA1-222ENST00000532504 SLC12A7Q9Y666 1083 aa18.51■□□□□ 0.55
PPFIA1-222ENST00000532504 TTC22Q5TAA0 569 aa18.51■□□□□ 0.55
PPFIA1-222ENST00000532504 CCDC144CPQ8IYA2 1237 aa18.51■□□□□ 0.55
PPFIA1-222ENST00000532504 EYA2O00167 538 aa18.51■□□□□ 0.55
PPFIA1-222ENST00000532504 HDAC1Q13547 482 aaPredicted RBP18.51■□□□□ 0.55
PPFIA1-222ENST00000532504 MFSD6Q6ZSS7 791 aa18.51■□□□□ 0.55
PPFIA1-222ENST00000532504 PAG1Q9NWQ8 432 aa18.51■□□□□ 0.55
PPFIA1-222ENST00000532504 LDHBP07195 334 aaKnown RBP18.51■□□□□ 0.55
PPFIA1-222ENST00000532504 SKOR2Q2VWA4 1001 aaPredicted RBP18.51■□□□□ 0.55
PPFIA1-222ENST00000532504 K7ELQ4 463 aaPredicted RBP18.5■□□□□ 0.55
PPFIA1-222ENST00000532504 CCDC83Q8IWF9 413 aa18.5■□□□□ 0.55
PPFIA1-222ENST00000532504 THRAP3Q9Y2W1 955 aaKnown RBP18.5■□□□□ 0.55
PPFIA1-222ENST00000532504 TNS3Q68CZ2 1445 aa18.5■□□□□ 0.55
PPFIA1-222ENST00000532504 JCADQ9P266 1359 aa18.5■□□□□ 0.55
PPFIA1-222ENST00000532504 PPFIA3O75145 1194 aa18.5■□□□□ 0.55
PPFIA1-222ENST00000532504 ATF5Q9Y2D1 282 aaPredicted RBP18.5■□□□□ 0.55
PPFIA1-222ENST00000532504 TXLNAP40222 546 aa18.5■□□□□ 0.55
PPFIA1-222ENST00000532504 NUCB1Q02818 461 aa18.5■□□□□ 0.55
PPFIA1-222ENST00000532504 ZHX3Q9H4I2 956 aa18.5■□□□□ 0.55
PPFIA1-222ENST00000532504 RTN4Q9NQC3 1192 aaKnown RBP18.5■□□□□ 0.55
PPFIA1-222ENST00000532504 CAMSAP1Q5T5Y3 1602 aa18.5■□□□□ 0.55
PPFIA1-222ENST00000532504 RBM6P78332 1123 aaKnown RBP18.5■□□□□ 0.55
PPFIA1-222ENST00000532504 MAGEB6Q8N7X4 407 aa18.49■□□□□ 0.55
PPFIA1-222ENST00000532504 ZNF396Q96N95 335 aaPredicted RBP18.49■□□□□ 0.55
PPFIA1-222ENST00000532504 ECM2O94769 699 aaPredicted RBP18.49■□□□□ 0.55
PPFIA1-222ENST00000532504 TSR1Q2NL82 804 aaKnown RBP18.49■□□□□ 0.55
PPFIA1-222ENST00000532504 TBC1D9Q6ZT07 1266 aa18.49■□□□□ 0.55
PPFIA1-222ENST00000532504 ZSCAN31Q96LW9 406 aaPredicted RBP18.49■□□□□ 0.55
PPFIA1-222ENST00000532504 SPHKAPQ2M3C7 1700 aa18.49■□□□□ 0.55
PPFIA1-222ENST00000532504 R3HCC1Q9Y3T6 440 aaKnown RBP18.49■□□□□ 0.55
PPFIA1-222ENST00000532504 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.49■□□□□ 0.55
PPFIA1-222ENST00000532504 HIBADHP31937 336 aaKnown RBP18.49■□□□□ 0.55
PPFIA1-222ENST00000532504 SASS6Q6UVJ0 657 aa18.49■□□□□ 0.55
PPFIA1-222ENST00000532504 GJD4Q96KN9 370 aaPredicted RBP18.48■□□□□ 0.55
PPFIA1-222ENST00000532504 ZBTB40Q9NUA8 1239 aa18.48■□□□□ 0.55
PPFIA1-222ENST00000532504 C1orf167Q5SNV9 1468 aa18.48■□□□□ 0.55
PPFIA1-222ENST00000532504 A0A1B0GUL7 405 aa18.48■□□□□ 0.55
PPFIA1-222ENST00000532504 SDSP20132 328 aa18.48■□□□□ 0.55
PPFIA1-222ENST00000532504 CCT2P78371 535 aaKnown RBP18.48■□□□□ 0.55
PPFIA1-222ENST00000532504 AGLP35573 1532 aa18.48■□□□□ 0.55
PPFIA1-222ENST00000532504 RIMS1Q86UR5 1692 aaKnown RBP18.48■□□□□ 0.55
PPFIA1-222ENST00000532504 PROSER3Q2NL68 480 aa18.48■□□□□ 0.55
PPFIA1-222ENST00000532504 NLGN1Q8N2Q7 840 aa18.48■□□□□ 0.55
PPFIA1-222ENST00000532504 ANKRD20A12PQ8NF67 263 aa18.48■□□□□ 0.55
PPFIA1-222ENST00000532504 TMEM67Q5HYA8 995 aa18.48■□□□□ 0.55
PPFIA1-222ENST00000532504 C2CD5Q86YS7 1000 aa18.48■□□□□ 0.55
PPFIA1-222ENST00000532504 SSBP05455 408 aaKnown RBP eCLIP18.47■□□□□ 0.55
PPFIA1-222ENST00000532504 NOL7Q9UMY1 257 aaKnown RBP18.47■□□□□ 0.55
PPFIA1-222ENST00000532504 INO80Q9ULG1 1556 aaPredicted RBP18.47■□□□□ 0.55
PPFIA1-222ENST00000532504 MAGEB6P1A0A0J9YX57 407 aa18.47■□□□□ 0.55
PPFIA1-222ENST00000532504 ZFYP08048 801 aaPredicted RBP18.47■□□□□ 0.55
PPFIA1-222ENST00000532504 CATIPQ7Z7H3 387 aa18.47■□□□□ 0.55
PPFIA1-222ENST00000532504 GOLGA8BA8MQT2 603 aa18.47■□□□□ 0.55
PPFIA1-222ENST00000532504 CYP27B1O15528 508 aa18.47■□□□□ 0.55
PPFIA1-222ENST00000532504 PPRC1Q5VV67 1664 aaKnown RBP18.47■□□□□ 0.55
PPFIA1-222ENST00000532504 NEURL1BA8MQ27 555 aa18.47■□□□□ 0.55
PPFIA1-222ENST00000532504 ME1P48163 572 aa18.47■□□□□ 0.55
PPFIA1-222ENST00000532504 PLEKHF1Q96S99 279 aa18.47■□□□□ 0.55
PPFIA1-222ENST00000532504 GOLGA8AA7E2F4 631 aa18.46■□□□□ 0.55
PPFIA1-222ENST00000532504 IBSPP21815 317 aaPredicted RBP18.46■□□□□ 0.55
PPFIA1-222ENST00000532504 PDE6BP35913 854 aa18.46■□□□□ 0.55
PPFIA1-222ENST00000532504 ZNF408Q9H9D4 720 aa18.46■□□□□ 0.55
PPFIA1-222ENST00000532504 ZBTB7BO15156 539 aaPredicted RBP18.46■□□□□ 0.55
PPFIA1-222ENST00000532504 FERMT3Q86UX7 667 aa18.46■□□□□ 0.55
PPFIA1-222ENST00000532504 KAT14Q9H8E8 782 aa18.46■□□□□ 0.55
PPFIA1-222ENST00000532504 NF2P35240 595 aa18.46■□□□□ 0.55
PPFIA1-222ENST00000532504 BMP2KLQ5H9B9 411 aa18.46■□□□□ 0.55
PPFIA1-222ENST00000532504 MICU3Q86XE3 530 aa18.46■□□□□ 0.55
PPFIA1-222ENST00000532504 MCM9Q9NXL9 1143 aa18.46■□□□□ 0.55
PPFIA1-222ENST00000532504 TSPY3P0CV98 308 aa18.45■□□□□ 0.54
PPFIA1-222ENST00000532504 TSPY8P0CW00 308 aa18.45■□□□□ 0.54
PPFIA1-222ENST00000532504 ALDH1B1P30837 517 aa18.45■□□□□ 0.54
PPFIA1-222ENST00000532504 RPS8P62241 208 aaKnown RBP18.45■□□□□ 0.54
PPFIA1-222ENST00000532504 GUCY1B3Q02153 619 aa18.45■□□□□ 0.54
PPFIA1-222ENST00000532504 PUM3Q15397 648 aaKnown RBP18.45■□□□□ 0.54
PPFIA1-222ENST00000532504 CEP89Q96ST8 783 aa18.45■□□□□ 0.54
PPFIA1-222ENST00000532504 EIF6P56537 245 aaKnown RBP18.45■□□□□ 0.54
PPFIA1-222ENST00000532504 WASF1Q92558 559 aa18.45■□□□□ 0.54
PPFIA1-222ENST00000532504 E9PCH4 1651 aa18.45■□□□□ 0.54
PPFIA1-222ENST00000532504 CCDC196A0A1B0GTZ2 297 aa18.45■□□□□ 0.54
PPFIA1-222ENST00000532504 MPNDQ8N594 471 aa18.45■□□□□ 0.54
PPFIA1-222ENST00000532504 DCTPP1Q9H773 170 aa18.45■□□□□ 0.54
PPFIA1-222ENST00000532504 LMTK2Q8IWU2 1503 aa18.45■□□□□ 0.54
PPFIA1-222ENST00000532504 KIDINS220Q9ULH0 1771 aa18.44■□□□□ 0.54
PPFIA1-222ENST00000532504 PRPF40AO75400 957 aaKnown RBP18.44■□□□□ 0.54
PPFIA1-222ENST00000532504 HMGB1P09429 215 aaKnown RBP18.44■□□□□ 0.54
PPFIA1-222ENST00000532504 CNKSR2Q8WXI2 1034 aa18.44■□□□□ 0.54
PPFIA1-222ENST00000532504 DBNDD2Q9BQY9 259 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms