RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 KRT24Q2M2I5 525 aa12.13□□□□□ -0.47
VPS26B-207ENST00000532160 GRIPAP1Q4V328 841 aa12.13□□□□□ -0.47
VPS26B-207ENST00000532160 SLC10A5Q5PT55 438 aa12.13□□□□□ -0.47
VPS26B-207ENST00000532160 NIM1KQ8IY84 436 aa12.13□□□□□ -0.47
VPS26B-207ENST00000532160 XAGE3Q8WTP9 111 aa12.13□□□□□ -0.47
VPS26B-207ENST00000532160 ZNF521Q96K83 1311 aa12.12□□□□□ -0.47
VPS26B-207ENST00000532160 TRPM7Q96QT4 1865 aa12.12□□□□□ -0.47
VPS26B-207ENST00000532160 RASSF10A6NK89 507 aa12.12□□□□□ -0.47
VPS26B-207ENST00000532160 HCLS1P14317 486 aaPredicted RBP12.12□□□□□ -0.47
VPS26B-207ENST00000532160 LMOD1P29536 600 aaPredicted RBP12.12□□□□□ -0.47
VPS26B-207ENST00000532160 DSG3P32926 999 aa12.12□□□□□ -0.47
VPS26B-207ENST00000532160 AIMP1Q12904 312 aaKnown RBP12.12□□□□□ -0.47
VPS26B-207ENST00000532160 COPS6Q7L5N1 327 aa12.12□□□□□ -0.47
VPS26B-207ENST00000532160 NLRP10Q86W26 655 aa12.12□□□□□ -0.47
VPS26B-207ENST00000532160 TSR2Q969E8 191 aaKnown RBP12.12□□□□□ -0.47
VPS26B-207ENST00000532160 ZNF428Q96B54 188 aa12.12□□□□□ -0.47
VPS26B-207ENST00000532160 CDCA7LQ96GN5 454 aa12.12□□□□□ -0.47
VPS26B-207ENST00000532160 DDX21Q9NR30 783 aaKnown RBP eCLIP12.12□□□□□ -0.47
VPS26B-207ENST00000532160 BABAM1Q9NWV8 329 aa12.12□□□□□ -0.47
VPS26B-207ENST00000532160 ATP6V0A2Q9Y487 856 aa12.12□□□□□ -0.47
VPS26B-207ENST00000532160 DEFB115Q30KQ5 88 aa12.11□□□□□ -0.47
VPS26B-207ENST00000532160 WDR63Q8IWG1 891 aa12.11□□□□□ -0.47
VPS26B-207ENST00000532160 AIDAQ96BJ3 306 aa12.11□□□□□ -0.47
VPS26B-207ENST00000532160 MBIPQ9NS73 344 aa12.11□□□□□ -0.47
VPS26B-207ENST00000532160 WBP1LQ9NX94 342 aa12.11□□□□□ -0.47
VPS26B-207ENST00000532160 ABT1Q9ULW3 272 aaKnown RBP12.11□□□□□ -0.47
VPS26B-207ENST00000532160 DDX60Q8IY21 1712 aaKnown RBP12.11□□□□□ -0.47
VPS26B-207ENST00000532160 WDR33Q9C0J8 1336 aaKnown RBP12.11□□□□□ -0.47
VPS26B-207ENST00000532160 TRAF5O00463 557 aa12.1□□□□□ -0.47
VPS26B-207ENST00000532160 CHL1O00533 1208 aa12.1□□□□□ -0.47
VPS26B-207ENST00000532160 ZNF853P0CG23 659 aa12.1□□□□□ -0.47
VPS26B-207ENST00000532160 CTCFP49711 727 aaPredicted RBP12.1□□□□□ -0.47
VPS26B-207ENST00000532160 CXCL9Q07325 125 aa12.1□□□□□ -0.47
VPS26B-207ENST00000532160 CFAP44Q96MT7 982 aa12.1□□□□□ -0.47
VPS26B-207ENST00000532160 RTFDC1Q9BY42 306 aaPredicted RBP12.1□□□□□ -0.47
VPS26B-207ENST00000532160 PRDM10Q9NQV6 1147 aa12.1□□□□□ -0.47
VPS26B-207ENST00000532160 DUOX1Q9NRD9 1551 aa12.09□□□□□ -0.47
VPS26B-207ENST00000532160 THSD7BQ9C0I4 1608 aa12.09□□□□□ -0.47
VPS26B-207ENST00000532160 LBX1P52954 281 aa12.09□□□□□ -0.47
VPS26B-207ENST00000532160 GNAI1P63096 354 aa12.09□□□□□ -0.47
VPS26B-207ENST00000532160 CALD1Q05682 793 aaKnown RBP12.09□□□□□ -0.47
VPS26B-207ENST00000532160 GOLGA2Q08379 1002 aa12.09□□□□□ -0.47
VPS26B-207ENST00000532160 TCIRG1Q13488 830 aa12.09□□□□□ -0.47
VPS26B-207ENST00000532160 HSP90AB3PQ58FF7 597 aa12.09□□□□□ -0.47
VPS26B-207ENST00000532160 USP50Q70EL3 339 aaPredicted RBP12.09□□□□□ -0.47
VPS26B-207ENST00000532160 IFT57Q9NWB7 429 aa12.09□□□□□ -0.47
VPS26B-207ENST00000532160 GPRC5DQ9NZD1 345 aa12.09□□□□□ -0.47
VPS26B-207ENST00000532160 CHPF2Q9P2E5 772 aa12.09□□□□□ -0.47
VPS26B-207ENST00000532160 TRMT112Q9UI30 125 aaKnown RBP12.09□□□□□ -0.47
VPS26B-207ENST00000532160 ZNRF3Q9ULT6 936 aa12.09□□□□□ -0.47
VPS26B-207ENST00000532160 SH3TC1Q8TE82 1336 aa12.09□□□□□ -0.47
VPS26B-207ENST00000532160 LRRC37AA6NMS7 1700 aa12.08□□□□□ -0.47
VPS26B-207ENST00000532160 COL4A1P02462 1669 aa12.08□□□□□ -0.48
VPS26B-207ENST00000532160 ELL2O00472 640 aaPredicted RBP12.08□□□□□ -0.48
VPS26B-207ENST00000532160 BBOX1O75936 387 aa12.08□□□□□ -0.48
VPS26B-207ENST00000532160 GMPSP49915 693 aaPredicted RBP12.08□□□□□ -0.48
VPS26B-207ENST00000532160 CST9Q5W186 159 aa12.08□□□□□ -0.48
VPS26B-207ENST00000532160 DPP8Q6V1X1 898 aaPredicted RBP12.08□□□□□ -0.48
VPS26B-207ENST00000532160 SP8Q8IXZ3 490 aa12.08□□□□□ -0.48
VPS26B-207ENST00000532160 TMX4Q9H1E5 349 aaPredicted RBP12.08□□□□□ -0.48
VPS26B-207ENST00000532160 ADARB2Q9NS39 739 aaKnown RBP12.08□□□□□ -0.48
VPS26B-207ENST00000532160 IL16Q14005 1332 aa12.08□□□□□ -0.48
VPS26B-207ENST00000532160 ZBED9Q6R2W3 1325 aa12.08□□□□□ -0.48
VPS26B-207ENST00000532160 FANCIQ9NVI1 1328 aa12.08□□□□□ -0.48
VPS26B-207ENST00000532160 RAD17O75943 681 aa12.07□□□□□ -0.48
VPS26B-207ENST00000532160 HSPA8P11142 646 aaKnown RBP12.07□□□□□ -0.48
VPS26B-207ENST00000532160 SLFN5Q08AF3 891 aa12.07□□□□□ -0.48
VPS26B-207ENST00000532160 KIAA2012Q0VF49 1180 aa12.07□□□□□ -0.48
VPS26B-207ENST00000532160 GRAPQ13588 217 aa12.07□□□□□ -0.48
VPS26B-207ENST00000532160 CYP4F22Q6NT55 531 aa12.07□□□□□ -0.48
VPS26B-207ENST00000532160 DDX46Q7L014 1031 aaKnown RBP12.07□□□□□ -0.48
VPS26B-207ENST00000532160 MPNDQ8N594 471 aa12.07□□□□□ -0.48
VPS26B-207ENST00000532160 SUPT20HQ8NEM7 779 aa12.07□□□□□ -0.48
VPS26B-207ENST00000532160 GRAPLQ8TC17 118 aaPredicted RBP12.07□□□□□ -0.48
VPS26B-207ENST00000532160 VPS33BQ9H267 617 aa12.07□□□□□ -0.48
VPS26B-207ENST00000532160 SHTN1A0MZ66 631 aa12.06□□□□□ -0.48
VPS26B-207ENST00000532160 YDJCA8MPS7 323 aa12.06□□□□□ -0.48
VPS26B-207ENST00000532160 GRM1Q13255 1194 aa12.06□□□□□ -0.48
VPS26B-207ENST00000532160 HDGFL1Q5TGJ6 251 aa12.06□□□□□ -0.48
VPS26B-207ENST00000532160 CIAPIN1Q6FI81 312 aa12.06□□□□□ -0.48
VPS26B-207ENST00000532160 SAMD1Q6SPF0 538 aaPredicted RBP12.06□□□□□ -0.48
VPS26B-207ENST00000532160 PAXIP1Q6ZW49 1069 aaPredicted RBP12.06□□□□□ -0.48
VPS26B-207ENST00000532160 TSPYL6Q8N831 410 aa12.06□□□□□ -0.48
VPS26B-207ENST00000532160 CAPNS2Q96L46 248 aa12.06□□□□□ -0.48
VPS26B-207ENST00000532160 ATP5J2-PTCD1G3V325 749 aa12.05□□□□□ -0.48
VPS26B-207ENST00000532160 HIRAP54198 1017 aaPredicted RBP12.05□□□□□ -0.48
VPS26B-207ENST00000532160 MAP2K1Q02750 393 aaPredicted RBP12.05□□□□□ -0.48
VPS26B-207ENST00000532160 EXOSC9Q06265 439 aaKnown RBP12.05□□□□□ -0.48
VPS26B-207ENST00000532160 C8orf58Q8NAV2 365 aa12.05□□□□□ -0.48
VPS26B-207ENST00000532160 TRPM4Q8TD43 1214 aa12.05□□□□□ -0.48
VPS26B-207ENST00000532160 FAM89AQ96GI7 184 aa12.05□□□□□ -0.48
VPS26B-207ENST00000532160 ISCA1Q9BUE6 129 aa12.05□□□□□ -0.48
VPS26B-207ENST00000532160 GLIS2Q9BZE0 524 aaPredicted RBP12.05□□□□□ -0.48
VPS26B-207ENST00000532160 TLL2Q9Y6L7 1015 aa12.05□□□□□ -0.48
VPS26B-207ENST00000532160 E9PSI1 815 aa12.04□□□□□ -0.48
VPS26B-207ENST00000532160 AOC2O75106 756 aa12.04□□□□□ -0.48
VPS26B-207ENST00000532160 CELF2O95319 508 aaKnown RBP12.04□□□□□ -0.48
VPS26B-207ENST00000532160 HOXB7P09629 217 aa12.04□□□□□ -0.48
VPS26B-207ENST00000532160 RTL5Q5HYW3 569 aaPredicted RBP12.04□□□□□ -0.48
VPS26B-207ENST00000532160 ANKRD13DQ6ZTN6 518 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms