RNA–Protein interactions for RNA: ENST00000531558.1

PICALM-215, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-215	ENST00000531558	SNED1	Q8TER0	1413 aa		32.77	■■■□□ 2.84
PICALM-215	ENST00000531558	BRPF1	P55201	1214 aa	Predicted RBP	32.76	■■■□□ 2.83
PICALM-215	ENST00000531558	RTKN2	Q8IZC4	609 aa		32.76	■■■□□ 2.83
PICALM-215	ENST00000531558	BBOX1	O75936	387 aa		32.75	■■■□□ 2.83
PICALM-215	ENST00000531558	ALDH1L1	O75891	902 aa		32.74	■■■□□ 2.83
PICALM-215	ENST00000531558	CASP7	P55210	303 aa		32.74	■■■□□ 2.83
PICALM-215	ENST00000531558	SRCIN1	Q9C0H9	1055 aa		32.74	■■■□□ 2.83
PICALM-215	ENST00000531558	SBF1	O95248	1867 aa		32.74	■■■□□ 2.83
PICALM-215	ENST00000531558	CTSW	P56202	376 aa		32.73	■■■□□ 2.83
PICALM-215	ENST00000531558	FKBP4	Q02790	459 aa	Known RBP eCLIP	32.73	■■■□□ 2.83
PICALM-215	ENST00000531558	CCDC152	Q4G0S7	254 aa		32.73	■■■□□ 2.83
PICALM-215	ENST00000531558	SLC51A	Q86UW1	340 aa		32.73	■■■□□ 2.83
PICALM-215	ENST00000531558	ATP6V0A2	Q9Y487	856 aa		32.73	■■■□□ 2.83
PICALM-215	ENST00000531558	GRIPAP1	Q4V328	841 aa		32.71	■■■□□ 2.83
PICALM-215	ENST00000531558	CELF1	Q92879	486 aa	Known RBP	32.71	■■■□□ 2.83
PICALM-215	ENST00000531558	PLA2G12B	Q9BX93	195 aa		32.71	■■■□□ 2.83
PICALM-215	ENST00000531558	TMC4	Q7Z404	712 aa		32.7	■■■□□ 2.83
PICALM-215	ENST00000531558	TMX4	Q9H1E5	349 aa	Predicted RBP	32.7	■■■□□ 2.83
PICALM-215	ENST00000531558	NOB1	Q9ULX3	412 aa	Known RBP	32.7	■■■□□ 2.83
PICALM-215	ENST00000531558	GRM8	O00222	908 aa		32.69	■■■□□ 2.82
PICALM-215	ENST00000531558	CCDC85A	Q96PX6	553 aa	Predicted RBP	32.69	■■■□□ 2.82
PICALM-215	ENST00000531558	PSMD1	Q99460	953 aa		32.69	■■■□□ 2.82
PICALM-215	ENST00000531558	COL4A1	P02462	1669 aa		32.69	■■■□□ 2.82
PICALM-215	ENST00000531558	SP8	Q8IXZ3	490 aa		32.68	■■■□□ 2.82
PICALM-215	ENST00000531558	TTLL11	Q8NHH1	800 aa		32.68	■■■□□ 2.82
PICALM-215	ENST00000531558	SEC31B	Q9NQW1	1179 aa		32.68	■■■□□ 2.82
PICALM-215	ENST00000531558	KIF16B	Q96L93	1317 aa		32.68	■■■□□ 2.82
PICALM-215	ENST00000531558	ZC3H4	Q9UPT8	1303 aa	Known RBP	32.68	■■■□□ 2.82
PICALM-215	ENST00000531558	TAF1	P21675	1872 aa		32.67	■■■□□ 2.82
PICALM-215	ENST00000531558	ZNF277	Q9NRM2	450 aa	Predicted RBP	32.66	■■■□□ 2.82
PICALM-215	ENST00000531558	C9orf78	Q9NZ63	289 aa	Predicted RBP	32.66	■■■□□ 2.82
PICALM-215	ENST00000531558	RTL9	Q8NET4	1388 aa		32.66	■■■□□ 2.82
PICALM-215	ENST00000531558	RPS8	P62241	208 aa	Known RBP	32.65	■■■□□ 2.82
PICALM-215	ENST00000531558	API5	Q9BZZ5	524 aa	Known RBP	32.65	■■■□□ 2.82
PICALM-215	ENST00000531558	GREM2	Q9H772	168 aa		32.64	■■■□□ 2.82
PICALM-215	ENST00000531558	MYH3	P11055	1940 aa		32.63	■■■□□ 2.81
PICALM-215	ENST00000531558	LRRC37A	A6NMS7	1700 aa		32.63	■■■□□ 2.81
PICALM-215	ENST00000531558	TIAM2	Q8IVF5	1701 aa		32.63	■■■□□ 2.81
PICALM-215	ENST00000531558	BCAR3	O75815	825 aa		32.62	■■■□□ 2.81
PICALM-215	ENST00000531558	ZNF526	Q8TF50	670 aa	Predicted RBP	32.62	■■■□□ 2.81
PICALM-215	ENST00000531558	ARHGAP45	Q92619	1136 aa		32.62	■■■□□ 2.81
PICALM-215	ENST00000531558	CCDC88A	Q3V6T2	1871 aa		32.61	■■■□□ 2.81
PICALM-215	ENST00000531558	CSF1R	P07333	972 aa		32.61	■■■□□ 2.81
PICALM-215	ENST00000531558	IARS	P41252	1262 aa	Known RBP	32.61	■■■□□ 2.81
PICALM-215	ENST00000531558	UTY	O14607	1347 aa		32.6	■■■□□ 2.81
PICALM-215	ENST00000531558	DPP8	Q6V1X1	898 aa	Predicted RBP	32.6	■■■□□ 2.81
PICALM-215	ENST00000531558	MPND	Q8N594	471 aa		32.6	■■■□□ 2.81
PICALM-215	ENST00000531558	CDC5L	Q99459	802 aa	Known RBP	32.6	■■■□□ 2.81
PICALM-215	ENST00000531558	FOXO4	P98177	505 aa		32.59	■■■□□ 2.81
PICALM-215	ENST00000531558	FAM161A	Q3B820	660 aa		32.59	■■■□□ 2.81
PICALM-215	ENST00000531558	ANKRD18A	Q8IVF6	992 aa		32.59	■■■□□ 2.81
PICALM-215	ENST00000531558	RTFDC1	Q9BY42	306 aa	Predicted RBP	32.59	■■■□□ 2.81
PICALM-215	ENST00000531558	GPBP1L1	Q9HC44	474 aa	Predicted RBP	32.59	■■■□□ 2.81
PICALM-215	ENST00000531558	DICER1	Q9UPY3	1922 aa	Known RBP	32.59	■■■□□ 2.81
PICALM-215	ENST00000531558	NBPF7	P0C2Y1	421 aa	Predicted RBP	32.58	■■■□□ 2.81
PICALM-215	ENST00000531558	CCT4	P50991	539 aa	Known RBP	32.58	■■■□□ 2.81
PICALM-215	ENST00000531558	IPO8	O15397	1037 aa	Known RBP	32.57	■■■□□ 2.8
PICALM-215	ENST00000531558	EPHA10	Q5JZY3	1008 aa		32.57	■■■□□ 2.8
PICALM-215	ENST00000531558	SUPT20H	Q8NEM7	779 aa		32.56	■■■□□ 2.8
PICALM-215	ENST00000531558	DUOX1	Q9NRD9	1551 aa		32.55	■■■□□ 2.8
PICALM-215	ENST00000531558	ITGA6	P23229	1130 aa		32.55	■■■□□ 2.8
PICALM-215	ENST00000531558	FRAT1	Q92837	279 aa	Predicted RBP	32.55	■■■□□ 2.8
PICALM-215	ENST00000531558	SUCLG2	Q96I99	432 aa		32.55	■■■□□ 2.8
PICALM-215	ENST00000531558	USP44	Q9H0E7	712 aa		32.54	■■■□□ 2.8
PICALM-215	ENST00000531558	KDM2B	Q8NHM5	1336 aa		32.53	■■■□□ 2.8
PICALM-215	ENST00000531558	TRIM27	P14373	513 aa		32.53	■■■□□ 2.8
PICALM-215	ENST00000531558	GPSM2	P81274	684 aa		32.53	■■■□□ 2.8
PICALM-215	ENST00000531558	LMBR1L	Q6UX01	489 aa		32.53	■■■□□ 2.8
PICALM-215	ENST00000531558	ATF7IP	Q6VMQ6	1270 aa		32.53	■■■□□ 2.8
PICALM-215	ENST00000531558	NSFL1C	Q9UNZ2	370 aa	Known RBP	32.53	■■■□□ 2.8
PICALM-215	ENST00000531558	GLTPD2	A6NH11	291 aa		32.52	■■■□□ 2.8
PICALM-215	ENST00000531558	LARGE2	Q8N3Y3	721 aa		32.52	■■■□□ 2.8
PICALM-215	ENST00000531558	KAZALD1	Q96I82	304 aa		32.52	■■■□□ 2.8
PICALM-215	ENST00000531558	VPS33B	Q9H267	617 aa		32.52	■■■□□ 2.8
PICALM-215	ENST00000531558	BSDC1	Q9NW68	430 aa	Predicted RBP	32.52	■■■□□ 2.8
PICALM-215	ENST00000531558	CHMP3	Q9Y3E7	222 aa		32.52	■■■□□ 2.8
PICALM-215	ENST00000531558	COL4A5	P29400	1685 aa		32.52	■■■□□ 2.8
PICALM-215	ENST00000531558	PPIP5K2	O43314	1243 aa		32.51	■■■□□ 2.79
PICALM-215	ENST00000531558	IGHMBP2	P38935	993 aa	Known RBP	32.51	■■■□□ 2.79
PICALM-215	ENST00000531558	JDP2	Q8WYK2	163 aa		32.51	■■■□□ 2.79
PICALM-215	ENST00000531558	LTBP1	Q14766	1721 aa		32.51	■■■□□ 2.79
PICALM-215	ENST00000531558	ANKRD18B	A2A2Z9	1011 aa		32.5	■■■□□ 2.79
PICALM-215	ENST00000531558	PODXL2	Q9NZ53	605 aa		32.5	■■■□□ 2.79
PICALM-215	ENST00000531558	IFIT5	Q13325	482 aa	Known RBP	32.49	■■■□□ 2.79
PICALM-215	ENST00000531558	AOC3	Q16853	763 aa		32.49	■■■□□ 2.79
PICALM-215	ENST00000531558	INTS3	Q68E01	1043 aa	Known RBP	32.49	■■■□□ 2.79
PICALM-215	ENST00000531558	KIAA2012	Q0VF49	1180 aa		32.48	■■■□□ 2.79
PICALM-215	ENST00000531558	ZKSCAN2	Q63HK3	967 aa		32.48	■■■□□ 2.79
PICALM-215	ENST00000531558	DPY19L2	Q6NUT2	758 aa		32.48	■■■□□ 2.79
PICALM-215	ENST00000531558	NMRK2	Q9NPI5	230 aa		32.48	■■■□□ 2.79
PICALM-215	ENST00000531558	TNN	Q9UQP3	1299 aa		32.48	■■■□□ 2.79
PICALM-215	ENST00000531558	FZD9	O00144	591 aa		32.47	■■■□□ 2.79
PICALM-215	ENST00000531558	BICC1	Q9H694	974 aa	Known RBP	32.47	■■■□□ 2.79
PICALM-215	ENST00000531558	ANKIB1	Q9P2G1	1089 aa		32.47	■■■□□ 2.79
PICALM-215	ENST00000531558	POLL	Q9UGP5	575 aa		32.47	■■■□□ 2.79
PICALM-215	ENST00000531558	RABL6	Q3YEC7	729 aa	Predicted RBP	32.46	■■■□□ 2.79
PICALM-215	ENST00000531558	NIM1K	Q8IY84	436 aa		32.46	■■■□□ 2.79
PICALM-215	ENST00000531558	TBC1D16	Q8TBP0	767 aa		32.46	■■■□□ 2.79
PICALM-215	ENST00000531558	MPHOSPH8	Q99549	860 aa		32.46	■■■□□ 2.79
PICALM-215	ENST00000531558	MINPP1	Q9UNW1	487 aa		32.46	■■■□□ 2.79

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