RNA–Protein interactions for RNA: ENST00000530646.1

RPL38-205, Transcript of ribosomal protein L38, humanhuman

TSL 1 (best)

Gene RPL38, Length 2,450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38-205ENST00000530646 USP6P35125 1406 aa21.29■■□□□ 1
RPL38-205ENST00000530646 TOPAZ1Q8N9V7 1692 aa21.29■■□□□ 1
RPL38-205ENST00000530646 BICD2Q8TD16 824 aa21.29■■□□□ 1
RPL38-205ENST00000530646 EFCC1Q9HA90 598 aa21.29■■□□□ 1
RPL38-205ENST00000530646 RSPH14Q9UHP6 348 aa21.29■■□□□ 1
RPL38-205ENST00000530646 KCNB2Q92953 911 aa21.29■■□□□ 1
RPL38-205ENST00000530646 ARHGEF10O15013 1369 aa21.28■■□□□ 1
RPL38-205ENST00000530646 NOP2P46087 812 aaKnown RBP21.28■■□□□ 1
RPL38-205ENST00000530646 SNW1Q13573 536 aaKnown RBP21.28■■□□□ 1
RPL38-205ENST00000530646 ADGRL3Q9HAR2 1447 aa21.28■■□□□ 1
RPL38-205ENST00000530646 ARHGAP29Q52LW3 1261 aa21.28■■□□□ 1
RPL38-205ENST00000530646 SSH3Q8TE77 659 aa21.28■■□□□ 1
RPL38-205ENST00000530646 POLR3GO15318 223 aaPredicted RBP21.27■■□□□ 1
RPL38-205ENST00000530646 PDCP20941 246 aa21.27■■□□□ 1
RPL38-205ENST00000530646 COL9A3Q14050 684 aaPredicted RBP21.27■■□□□ 1
RPL38-205ENST00000530646 MUM1L1Q5H9M0 696 aa21.27■■□□□ 1
RPL38-205ENST00000530646 SYTL4Q96C24 671 aaPredicted RBP21.27■■□□□ 1
RPL38-205ENST00000530646 ZNF142P52746 1687 aaPredicted RBP21.27■■□□□ 1
RPL38-205ENST00000530646 E4F1Q66K89 784 aaPredicted RBP21.27■□□□□ 0.99
RPL38-205ENST00000530646 LARP1Q6PKG0 1096 aaKnown RBP21.27■□□□□ 0.99
RPL38-205ENST00000530646 RHPN1Q8TCX5 695 aa21.27■□□□□ 0.99
RPL38-205ENST00000530646 CRYBG1Q9Y4K1 1723 aa21.26■□□□□ 0.99
RPL38-205ENST00000530646 SYT10Q6XYQ8 523 aa21.26■□□□□ 0.99
RPL38-205ENST00000530646 YY1AP1Q9H869 796 aa21.26■□□□□ 0.99
RPL38-205ENST00000530646 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.26■□□□□ 0.99
RPL38-205ENST00000530646 RAB11FIP3O75154 756 aa21.26■□□□□ 0.99
RPL38-205ENST00000530646 FLIIQ13045 1269 aa21.26■□□□□ 0.99
RPL38-205ENST00000530646 EIF4A2Q14240 407 aaKnown RBP21.26■□□□□ 0.99
RPL38-205ENST00000530646 TEX35Q5T0J7 233 aa21.26■□□□□ 0.99
RPL38-205ENST00000530646 TXLNBQ8N3L3 684 aa21.26■□□□□ 0.99
RPL38-205ENST00000530646 SURF6O75683 361 aaKnown RBP21.25■□□□□ 0.99
RPL38-205ENST00000530646 ST5P78524 1137 aa21.25■□□□□ 0.99
RPL38-205ENST00000530646 DHX40Q8IX18 779 aaKnown RBP21.25■□□□□ 0.99
RPL38-205ENST00000530646 PPP1R13BQ96KQ4 1090 aa21.25■□□□□ 0.99
RPL38-205ENST00000530646 USP44Q9H0E7 712 aa21.25■□□□□ 0.99
RPL38-205ENST00000530646 ADCY9O60503 1353 aa21.25■□□□□ 0.99
RPL38-205ENST00000530646 TSPYL4Q9UJ04 414 aa21.24■□□□□ 0.99
RPL38-205ENST00000530646 CHD2O14647 1828 aaKnown RBP21.24■□□□□ 0.99
RPL38-205ENST00000530646 NECTIN1Q15223 517 aa21.24■□□□□ 0.99
RPL38-205ENST00000530646 KRBA2Q6ZNG9 492 aa21.24■□□□□ 0.99
RPL38-205ENST00000530646 SMARCE1Q969G3 411 aa21.24■□□□□ 0.99
RPL38-205ENST00000530646 UBXN6Q9BZV1 441 aa21.24■□□□□ 0.99
RPL38-205ENST00000530646 NRKQ7Z2Y5 1582 aa21.24■□□□□ 0.99
RPL38-205ENST00000530646 STX1AQ16623 288 aa21.23■□□□□ 0.99
RPL38-205ENST00000530646 STK31Q9BXU1 1019 aa21.23■□□□□ 0.99
RPL38-205ENST00000530646 TPM4P67936 248 aa21.23■□□□□ 0.99
RPL38-205ENST00000530646 HSP90AB2PQ58FF8 381 aa21.23■□□□□ 0.99
RPL38-205ENST00000530646 TMCO3Q6UWJ1 677 aa21.23■□□□□ 0.99
RPL38-205ENST00000530646 C14orf37Q86TY3 774 aa21.23■□□□□ 0.99
RPL38-205ENST00000530646 RASSF4Q9H2L5 321 aa21.23■□□□□ 0.99
RPL38-205ENST00000530646 TMX1Q9H3N1 280 aa21.23■□□□□ 0.99
RPL38-205ENST00000530646 ORC3Q9UBD5 711 aaPredicted RBP21.23■□□□□ 0.99
RPL38-205ENST00000530646 LCMT1Q9UIC8 334 aa21.23■□□□□ 0.99
RPL38-205ENST00000530646 NPHP4O75161 1426 aaPredicted RBP21.23■□□□□ 0.99
RPL38-205ENST00000530646 A0A087WWV3 80 aa21.22■□□□□ 0.99
RPL38-205ENST00000530646 TRIM66O15016 1216 aa21.22■□□□□ 0.99
RPL38-205ENST00000530646 HSPA2P54652 639 aa21.22■□□□□ 0.99
RPL38-205ENST00000530646 NBPF11Q86T75 865 aa21.22■□□□□ 0.99
RPL38-205ENST00000530646 BECN2A8MW95 431 aa21.22■□□□□ 0.99
RPL38-205ENST00000530646 DHX16O60231 1041 aaKnown RBP21.22■□□□□ 0.99
RPL38-205ENST00000530646 PPP1R42Q7Z4L9 355 aa21.22■□□□□ 0.99
RPL38-205ENST00000530646 OSBPL5Q9H0X9 879 aaPredicted RBP21.22■□□□□ 0.99
RPL38-205ENST00000530646 UBTFL1P0CB47 393 aaPredicted RBP21.21■□□□□ 0.99
RPL38-205ENST00000530646 TNNT3P45378 269 aaPredicted RBP21.21■□□□□ 0.99
RPL38-205ENST00000530646 GSDMDP57764 484 aa21.21■□□□□ 0.99
RPL38-205ENST00000530646 POLA2Q14181 598 aa21.21■□□□□ 0.99
RPL38-205ENST00000530646 GEMIN8Q9NWZ8 242 aaKnown RBP21.21■□□□□ 0.99
RPL38-205ENST00000530646 RUFY2Q8WXA3 655 aa21.21■□□□□ 0.99
RPL38-205ENST00000530646 OVOS2A0A0J9YW53 1432 aa21.21■□□□□ 0.99
RPL38-205ENST00000530646 OVOS2Q6IE36 1432 aa21.21■□□□□ 0.99
RPL38-205ENST00000530646 NALCNQ8IZF0 1738 aa21.2■□□□□ 0.99
RPL38-205ENST00000530646 SEC31AO94979 1220 aaKnown RBP21.2■□□□□ 0.98
RPL38-205ENST00000530646 GYS2P54840 703 aa21.2■□□□□ 0.98
RPL38-205ENST00000530646 ZCCHC17Q9NP64 241 aaKnown RBP21.2■□□□□ 0.98
RPL38-205ENST00000530646 GIGYF1O75420 1035 aaPredicted RBP21.2■□□□□ 0.98
RPL38-205ENST00000530646 CREB3L3Q68CJ9 461 aa21.2■□□□□ 0.98
RPL38-205ENST00000530646 ARGLU1Q9NWB6 273 aaPredicted RBP21.2■□□□□ 0.98
RPL38-205ENST00000530646 PSDA5PKW4 1024 aaPredicted RBP21.19■□□□□ 0.98
RPL38-205ENST00000530646 FOXO3O43524 673 aa21.19■□□□□ 0.98
RPL38-205ENST00000530646 ZKSCAN1P17029 563 aaPredicted RBP21.19■□□□□ 0.98
RPL38-205ENST00000530646 TCEANC2Q96MN5 208 aa21.19■□□□□ 0.98
RPL38-205ENST00000530646 RESTQ13127 1097 aa21.19■□□□□ 0.98
RPL38-205ENST00000530646 GORABQ5T7V8 394 aa21.19■□□□□ 0.98
RPL38-205ENST00000530646 ATG3Q9NT62 314 aa21.19■□□□□ 0.98
RPL38-205ENST00000530646 RBM8AQ9Y5S9 174 aaKnown RBP21.19■□□□□ 0.98
RPL38-205ENST00000530646 NLRP6P59044 892 aa21.18■□□□□ 0.98
RPL38-205ENST00000530646 ARMCX5Q6P1M9 558 aa21.18■□□□□ 0.98
RPL38-205ENST00000530646 UBXN4Q92575 508 aa21.18■□□□□ 0.98
RPL38-205ENST00000530646 NECTIN2Q92692 538 aa21.18■□□□□ 0.98
RPL38-205ENST00000530646 MAP3K5Q99683 1374 aa21.18■□□□□ 0.98
RPL38-205ENST00000530646 FAM208AQ9UK61 1670 aaKnown RBP21.18■□□□□ 0.98
RPL38-205ENST00000530646 MYO1CO00159 1063 aa21.18■□□□□ 0.98
RPL38-205ENST00000530646 C10orf67Q8IYJ2 551 aa21.18■□□□□ 0.98
RPL38-205ENST00000530646 USP42Q9H9J4 1324 aaKnown RBP21.18■□□□□ 0.98
RPL38-205ENST00000530646 SASH3O75995 380 aa21.17■□□□□ 0.98
RPL38-205ENST00000530646 ZSCAN26Q16670 478 aa21.17■□□□□ 0.98
RPL38-205ENST00000530646 ESCO1Q5FWF5 840 aa21.17■□□□□ 0.98
RPL38-205ENST00000530646 AOPEPQ8N6M6 819 aa21.17■□□□□ 0.98
RPL38-205ENST00000530646 IMPACTQ9P2X3 320 aa21.17■□□□□ 0.98
RPL38-205ENST00000530646 N4BP2Q86UW6 1770 aaPredicted RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms