RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 PPEF1O14829 653 aaPredicted RBP16.1■□□□□ 0.17
CCDC90B-216ENST00000529856 RARSP54136 660 aaKnown RBP16.1■□□□□ 0.17
CCDC90B-216ENST00000529856 BRPF1P55201 1214 aaPredicted RBP16.1■□□□□ 0.17
CCDC90B-216ENST00000529856 CASP7P55210 303 aa16.1■□□□□ 0.17
CCDC90B-216ENST00000529856 GRAPQ13588 217 aa16.1■□□□□ 0.17
CCDC90B-216ENST00000529856 SLC4A10Q6U841 1118 aa16.1■□□□□ 0.17
CCDC90B-216ENST00000529856 GRAPLQ8TC17 118 aaPredicted RBP16.1■□□□□ 0.17
CCDC90B-216ENST00000529856 TAOK3Q9H2K8 898 aa16.1■□□□□ 0.17
CCDC90B-216ENST00000529856 ATP6V0A2Q9Y487 856 aa16.1■□□□□ 0.17
CCDC90B-216ENST00000529856 HOXD11P31277 338 aaPredicted RBP16.09■□□□□ 0.17
CCDC90B-216ENST00000529856 GRIPAP1Q4V328 841 aa16.09■□□□□ 0.17
CCDC90B-216ENST00000529856 UBE3BQ7Z3V4 1068 aa16.09■□□□□ 0.17
CCDC90B-216ENST00000529856 TAF1P21675 1872 aa16.09■□□□□ 0.17
CCDC90B-216ENST00000529856 CCDC88AQ3V6T2 1871 aa16.09■□□□□ 0.17
CCDC90B-216ENST00000529856 ALDH1L1O75891 902 aa16.08■□□□□ 0.16
CCDC90B-216ENST00000529856 FKBP4Q02790 459 aaKnown RBP eCLIP16.08■□□□□ 0.16
CCDC90B-216ENST00000529856 CCDC152Q4G0S7 254 aa16.08■□□□□ 0.16
CCDC90B-216ENST00000529856 SP8Q8IXZ3 490 aa16.08■□□□□ 0.16
CCDC90B-216ENST00000529856 PLA2G12BQ9BX93 195 aa16.08■□□□□ 0.16
CCDC90B-216ENST00000529856 SRCIN1Q9C0H9 1055 aa16.08■□□□□ 0.16
CCDC90B-216ENST00000529856 SNED1Q8TER0 1413 aa16.08■□□□□ 0.16
CCDC90B-216ENST00000529856 TMC4Q7Z404 712 aa16.07■□□□□ 0.16
CCDC90B-216ENST00000529856 SLC51AQ86UW1 340 aa16.07■□□□□ 0.16
CCDC90B-216ENST00000529856 TTLL11Q8NHH1 800 aa16.07■□□□□ 0.16
CCDC90B-216ENST00000529856 CELF1Q92879 486 aaKnown RBP16.07■□□□□ 0.16
CCDC90B-216ENST00000529856 TMX4Q9H1E5 349 aaPredicted RBP16.07■□□□□ 0.16
CCDC90B-216ENST00000529856 NOB1Q9ULX3 412 aaKnown RBP16.07■□□□□ 0.16
CCDC90B-216ENST00000529856 CTSWP56202 376 aa16.06■□□□□ 0.16
CCDC90B-216ENST00000529856 RPS8P62241 208 aaKnown RBP16.06■□□□□ 0.16
CCDC90B-216ENST00000529856 PSMD1Q99460 953 aa16.06■□□□□ 0.16
CCDC90B-216ENST00000529856 SEC31BQ9NQW1 1179 aa16.06■□□□□ 0.16
CCDC90B-216ENST00000529856 ZC3H4Q9UPT8 1303 aaKnown RBP16.05■□□□□ 0.16
CCDC90B-216ENST00000529856 CCDC85AQ96PX6 553 aaPredicted RBP16.05■□□□□ 0.16
CCDC90B-216ENST00000529856 ZNF277Q9NRM2 450 aaPredicted RBP16.05■□□□□ 0.16
CCDC90B-216ENST00000529856 DICER1Q9UPY3 1922 aaKnown RBP16.05■□□□□ 0.16
CCDC90B-216ENST00000529856 MYH3P11055 1940 aa16.04■□□□□ 0.16
CCDC90B-216ENST00000529856 GRM8O00222 908 aa16.04■□□□□ 0.16
CCDC90B-216ENST00000529856 CSF1RP07333 972 aa16.04■□□□□ 0.16
CCDC90B-216ENST00000529856 ARHGAP45Q92619 1136 aa16.04■□□□□ 0.16
CCDC90B-216ENST00000529856 C9orf78Q9NZ63 289 aaPredicted RBP16.04■□□□□ 0.16
CCDC90B-216ENST00000529856 RTL9Q8NET4 1388 aa16.03■□□□□ 0.16
CCDC90B-216ENST00000529856 COL4A1P02462 1669 aa16.03■□□□□ 0.16
CCDC90B-216ENST00000529856 ZNF526Q8TF50 670 aaPredicted RBP16.03■□□□□ 0.16
CCDC90B-216ENST00000529856 CNKSR2Q8WXI2 1034 aa16.03■□□□□ 0.16
CCDC90B-216ENST00000529856 API5Q9BZZ5 524 aaKnown RBP16.03■□□□□ 0.16
CCDC90B-216ENST00000529856 GREM2Q9H772 168 aa16.03■□□□□ 0.16
CCDC90B-216ENST00000529856 UTYO14607 1347 aa16.02■□□□□ 0.16
CCDC90B-216ENST00000529856 KIF16BQ96L93 1317 aa16.02■□□□□ 0.16
CCDC90B-216ENST00000529856 BCAR3O75815 825 aa16.02■□□□□ 0.16
CCDC90B-216ENST00000529856 IARSP41252 1262 aaKnown RBP16.02■□□□□ 0.16
CCDC90B-216ENST00000529856 FOXO4P98177 505 aa16.02■□□□□ 0.16
CCDC90B-216ENST00000529856 DPP8Q6V1X1 898 aaPredicted RBP16.02■□□□□ 0.16
CCDC90B-216ENST00000529856 MPNDQ8N594 471 aa16.02■□□□□ 0.16
CCDC90B-216ENST00000529856 RTFDC1Q9BY42 306 aaPredicted RBP16.02■□□□□ 0.16
CCDC90B-216ENST00000529856 GPBP1L1Q9HC44 474 aaPredicted RBP16.02■□□□□ 0.16
CCDC90B-216ENST00000529856 NBPF7P0C2Y1 421 aaPredicted RBP16.01■□□□□ 0.15
CCDC90B-216ENST00000529856 CCT4P50991 539 aaKnown RBP16.01■□□□□ 0.15
CCDC90B-216ENST00000529856 ANKRD18AQ8IVF6 992 aa16.01■□□□□ 0.15
CCDC90B-216ENST00000529856 SUPT20HQ8NEM7 779 aa16.01■□□□□ 0.15
CCDC90B-216ENST00000529856 CDC5LQ99459 802 aaKnown RBP16.01■□□□□ 0.15
CCDC90B-216ENST00000529856 VPS33BQ9H267 617 aa16.01■□□□□ 0.15
CCDC90B-216ENST00000529856 LRRC37AA6NMS7 1700 aa16■□□□□ 0.15
CCDC90B-216ENST00000529856 GLTPD2A6NH11 291 aa16■□□□□ 0.15
CCDC90B-216ENST00000529856 IPO8O15397 1037 aaKnown RBP16■□□□□ 0.15
CCDC90B-216ENST00000529856 EPHA10Q5JZY3 1008 aa16■□□□□ 0.15
CCDC90B-216ENST00000529856 USP44Q9H0E7 712 aa16■□□□□ 0.15
CCDC90B-216ENST00000529856 TIAM2Q8IVF5 1701 aa15.99■□□□□ 0.15
CCDC90B-216ENST00000529856 ITGA6P23229 1130 aa15.99■□□□□ 0.15
CCDC90B-216ENST00000529856 GPSM2P81274 684 aa15.99■□□□□ 0.15
CCDC90B-216ENST00000529856 FAM161AQ3B820 660 aa15.99■□□□□ 0.15
CCDC90B-216ENST00000529856 LMBR1LQ6UX01 489 aa15.99■□□□□ 0.15
CCDC90B-216ENST00000529856 KAZALD1Q96I82 304 aa15.99■□□□□ 0.15
CCDC90B-216ENST00000529856 SUCLG2Q96I99 432 aa15.99■□□□□ 0.15
CCDC90B-216ENST00000529856 NSFL1CQ9UNZ2 370 aaKnown RBP15.99■□□□□ 0.15
CCDC90B-216ENST00000529856 KDM2BQ8NHM5 1336 aa15.98■□□□□ 0.15
CCDC90B-216ENST00000529856 DPY19L2Q6NUT2 758 aa15.98■□□□□ 0.15
CCDC90B-216ENST00000529856 LARGE2Q8N3Y3 721 aa15.98■□□□□ 0.15
CCDC90B-216ENST00000529856 FRAT1Q92837 279 aaPredicted RBP15.98■□□□□ 0.15
CCDC90B-216ENST00000529856 BSDC1Q9NW68 430 aaPredicted RBP15.98■□□□□ 0.15
CCDC90B-216ENST00000529856 PODXL2Q9NZ53 605 aa15.98■□□□□ 0.15
CCDC90B-216ENST00000529856 ANKRD18BA2A2Z9 1011 aa15.97■□□□□ 0.15
CCDC90B-216ENST00000529856 FZD9O00144 591 aa15.97■□□□□ 0.15
CCDC90B-216ENST00000529856 PPIP5K2O43314 1243 aa15.97■□□□□ 0.15
CCDC90B-216ENST00000529856 INTS3Q68E01 1043 aaKnown RBP15.97■□□□□ 0.15
CCDC90B-216ENST00000529856 ATF7IPQ6VMQ6 1270 aa15.97■□□□□ 0.15
CCDC90B-216ENST00000529856 JDP2Q8WYK2 163 aa15.97■□□□□ 0.15
CCDC90B-216ENST00000529856 POLLQ9UGP5 575 aa15.97■□□□□ 0.15
CCDC90B-216ENST00000529856 TRIM27P14373 513 aa15.96■□□□□ 0.15
CCDC90B-216ENST00000529856 IGHMBP2P38935 993 aaKnown RBP15.96■□□□□ 0.15
CCDC90B-216ENST00000529856 KIAA2012Q0VF49 1180 aa15.96■□□□□ 0.15
CCDC90B-216ENST00000529856 IFIT5Q13325 482 aaKnown RBP15.96■□□□□ 0.15
CCDC90B-216ENST00000529856 AOC3Q16853 763 aa15.96■□□□□ 0.15
CCDC90B-216ENST00000529856 ZKSCAN2Q63HK3 967 aa15.96■□□□□ 0.15
CCDC90B-216ENST00000529856 TBC1D16Q8TBP0 767 aa15.96■□□□□ 0.15
CCDC90B-216ENST00000529856 NMRK2Q9NPI5 230 aa15.96■□□□□ 0.15
CCDC90B-216ENST00000529856 MINPP1Q9UNW1 487 aa15.96■□□□□ 0.15
CCDC90B-216ENST00000529856 CHMP3Q9Y3E7 222 aa15.96■□□□□ 0.15
CCDC90B-216ENST00000529856 DUOX1Q9NRD9 1551 aa15.96■□□□□ 0.14
CCDC90B-216ENST00000529856 COL4A5P29400 1685 aa15.95■□□□□ 0.14
CCDC90B-216ENST00000529856 LTBP1Q14766 1721 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms