RNA–Protein interactions for RNA: ENST00000527243.5

CTSB-214, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-214ENST00000527243 PPEF1O14829 653 aaPredicted RBP14.28□□□□□ -0.12
CTSB-214ENST00000527243 HSP90B1P14625 803 aaKnown RBP14.28□□□□□ -0.12
CTSB-214ENST00000527243 FKBP4Q02790 459 aaKnown RBP eCLIP14.28□□□□□ -0.12
CTSB-214ENST00000527243 ZBED9Q6R2W3 1325 aa14.28□□□□□ -0.12
CTSB-214ENST00000527243 DDX46Q7L014 1031 aaKnown RBP14.28□□□□□ -0.12
CTSB-214ENST00000527243 RTKN2Q8IZC4 609 aa14.28□□□□□ -0.12
CTSB-214ENST00000527243 PSMD1Q99460 953 aa14.28□□□□□ -0.12
CTSB-214ENST00000527243 PLA2G12BQ9BX93 195 aa14.28□□□□□ -0.12
CTSB-214ENST00000527243 GTF3C3Q9Y5Q9 886 aa14.28□□□□□ -0.12
CTSB-214ENST00000527243 CACNA1SQ13698 1873 aa14.27□□□□□ -0.12
CTSB-214ENST00000527243 PTPRCP08575 1304 aa14.27□□□□□ -0.12
CTSB-214ENST00000527243 GRIPAP1Q4V328 841 aa14.27□□□□□ -0.13
CTSB-214ENST00000527243 CELF1Q92879 486 aaKnown RBP14.27□□□□□ -0.13
CTSB-214ENST00000527243 BCL2L13Q9BXK5 485 aa14.27□□□□□ -0.13
CTSB-214ENST00000527243 RTL9Q8NET4 1388 aa14.26□□□□□ -0.13
CTSB-214ENST00000527243 ALDH1L1O75891 902 aa14.26□□□□□ -0.13
CTSB-214ENST00000527243 RARSP54136 660 aaKnown RBP14.26□□□□□ -0.13
CTSB-214ENST00000527243 CTSWP56202 376 aa14.26□□□□□ -0.13
CTSB-214ENST00000527243 UBE3BQ7Z3V4 1068 aa14.26□□□□□ -0.13
CTSB-214ENST00000527243 SP8Q8IXZ3 490 aa14.26□□□□□ -0.13
CTSB-214ENST00000527243 TTLL11Q8NHH1 800 aa14.26□□□□□ -0.13
CTSB-214ENST00000527243 TMC4Q7Z404 712 aa14.25□□□□□ -0.13
CTSB-214ENST00000527243 RTFDC1Q9BY42 306 aaPredicted RBP14.25□□□□□ -0.13
CTSB-214ENST00000527243 SEC31BQ9NQW1 1179 aa14.25□□□□□ -0.13
CTSB-214ENST00000527243 SMC4Q9NTJ3 1288 aa14.25□□□□□ -0.13
CTSB-214ENST00000527243 CSF1RP07333 972 aa14.24□□□□□ -0.13
CTSB-214ENST00000527243 RPS8P62241 208 aaKnown RBP14.24□□□□□ -0.13
CTSB-214ENST00000527243 CCDC152Q4G0S7 254 aa14.24□□□□□ -0.13
CTSB-214ENST00000527243 ZNF277Q9NRM2 450 aaPredicted RBP14.24□□□□□ -0.13
CTSB-214ENST00000527243 LRRC37AA6NMS7 1700 aa14.24□□□□□ -0.13
CTSB-214ENST00000527243 UTYO14607 1347 aa14.23□□□□□ -0.13
CTSB-214ENST00000527243 GRM8O00222 908 aa14.23□□□□□ -0.13
CTSB-214ENST00000527243 SRCIN1Q9C0H9 1055 aa14.23□□□□□ -0.13
CTSB-214ENST00000527243 COL4A5P29400 1685 aa14.23□□□□□ -0.13
CTSB-214ENST00000527243 TAF1P21675 1872 aa14.23□□□□□ -0.13
CTSB-214ENST00000527243 DUOX1Q9NRD9 1551 aa14.22□□□□□ -0.13
CTSB-214ENST00000527243 DICER1Q9UPY3 1922 aaKnown RBP14.22□□□□□ -0.13
CTSB-214ENST00000527243 KIF3CO14782 793 aa14.22□□□□□ -0.13
CTSB-214ENST00000527243 IARSP41252 1262 aaKnown RBP14.22□□□□□ -0.13
CTSB-214ENST00000527243 FOXO4P98177 505 aa14.22□□□□□ -0.13
CTSB-214ENST00000527243 SLC4A10Q6U841 1118 aa14.22□□□□□ -0.13
CTSB-214ENST00000527243 GREM2Q9H772 168 aa14.22□□□□□ -0.13
CTSB-214ENST00000527243 GPBP1L1Q9HC44 474 aaPredicted RBP14.22□□□□□ -0.13
CTSB-214ENST00000527243 GLTPD2A6NH11 291 aa14.21□□□□□ -0.13
CTSB-214ENST00000527243 EPHA10Q5JZY3 1008 aa14.21□□□□□ -0.13
CTSB-214ENST00000527243 MPNDQ8N594 471 aa14.21□□□□□ -0.13
CTSB-214ENST00000527243 ZNF526Q8TF50 670 aaPredicted RBP14.21□□□□□ -0.13
CTSB-214ENST00000527243 KAZALD1Q96I82 304 aa14.21□□□□□ -0.13
CTSB-214ENST00000527243 CCDC85AQ96PX6 553 aaPredicted RBP14.21□□□□□ -0.13
CTSB-214ENST00000527243 VPS33BQ9H267 617 aa14.21□□□□□ -0.13
CTSB-214ENST00000527243 NOB1Q9ULX3 412 aaKnown RBP14.21□□□□□ -0.13
CTSB-214ENST00000527243 TIAM2Q8IVF5 1701 aa14.21□□□□□ -0.14
CTSB-214ENST00000527243 CCDC88AQ3V6T2 1871 aa14.21□□□□□ -0.14
CTSB-214ENST00000527243 FZD9O00144 591 aa14.2□□□□□ -0.14
CTSB-214ENST00000527243 DPP8Q6V1X1 898 aaPredicted RBP14.2□□□□□ -0.14
CTSB-214ENST00000527243 ARHGAP45Q92619 1136 aa14.2□□□□□ -0.14
CTSB-214ENST00000527243 NMRK2Q9NPI5 230 aa14.2□□□□□ -0.14
CTSB-214ENST00000527243 LTBP1Q14766 1721 aa14.2□□□□□ -0.14
CTSB-214ENST00000527243 KIF16BQ96L93 1317 aa14.19□□□□□ -0.14
CTSB-214ENST00000527243 POTECB2RU33 542 aa14.19□□□□□ -0.14
CTSB-214ENST00000527243 NBPF7P0C2Y1 421 aaPredicted RBP14.19□□□□□ -0.14
CTSB-214ENST00000527243 GPSM2P81274 684 aa14.19□□□□□ -0.14
CTSB-214ENST00000527243 FAM161AQ3B820 660 aa14.19□□□□□ -0.14
CTSB-214ENST00000527243 CDC5LQ99459 802 aaKnown RBP14.19□□□□□ -0.14
CTSB-214ENST00000527243 USP44Q9H0E7 712 aa14.19□□□□□ -0.14
CTSB-214ENST00000527243 PODXL2Q9NZ53 605 aa14.19□□□□□ -0.14
CTSB-214ENST00000527243 KDM2BQ8NHM5 1336 aa14.18□□□□□ -0.14
CTSB-214ENST00000527243 BCAR3O75815 825 aa14.18□□□□□ -0.14
CTSB-214ENST00000527243 KIAA2012Q0VF49 1180 aa14.18□□□□□ -0.14
CTSB-214ENST00000527243 ANKRD18AQ8IVF6 992 aa14.18□□□□□ -0.14
CTSB-214ENST00000527243 SUPT20HQ8NEM7 779 aa14.18□□□□□ -0.14
CTSB-214ENST00000527243 SUCLG2Q96I99 432 aa14.18□□□□□ -0.14
CTSB-214ENST00000527243 API5Q9BZZ5 524 aaKnown RBP14.18□□□□□ -0.14
CTSB-214ENST00000527243 TMX4Q9H1E5 349 aaPredicted RBP14.18□□□□□ -0.14
CTSB-214ENST00000527243 BSDC1Q9NW68 430 aaPredicted RBP14.18□□□□□ -0.14
CTSB-214ENST00000527243 C9orf78Q9NZ63 289 aaPredicted RBP14.18□□□□□ -0.14
CTSB-214ENST00000527243 POLLQ9UGP5 575 aa14.18□□□□□ -0.14
CTSB-214ENST00000527243 ZNF541Q9H0D2 1346 aa14.17□□□□□ -0.14
CTSB-214ENST00000527243 MYH3P11055 1940 aa14.17□□□□□ -0.14
CTSB-214ENST00000527243 ITGA6P23229 1130 aa14.17□□□□□ -0.14
CTSB-214ENST00000527243 AOC3Q16853 763 aa14.17□□□□□ -0.14
CTSB-214ENST00000527243 RABL6Q3YEC7 729 aaPredicted RBP14.17□□□□□ -0.14
CTSB-214ENST00000527243 LARGE2Q8N3Y3 721 aa14.17□□□□□ -0.14
CTSB-214ENST00000527243 PPIP5K2O43314 1243 aa14.16□□□□□ -0.14
CTSB-214ENST00000527243 DDNO94850 711 aaPredicted RBP14.16□□□□□ -0.14
CTSB-214ENST00000527243 CCT4P50991 539 aaKnown RBP14.16□□□□□ -0.14
CTSB-214ENST00000527243 DPY19L2Q6NUT2 758 aa14.16□□□□□ -0.14
CTSB-214ENST00000527243 LMBR1LQ6UX01 489 aa14.16□□□□□ -0.14
CTSB-214ENST00000527243 ANKRD44Q8N8A2 993 aa14.16□□□□□ -0.14
CTSB-214ENST00000527243 TBC1D16Q8TBP0 767 aa14.16□□□□□ -0.14
CTSB-214ENST00000527243 L3MBTL3Q96JM7 780 aaPredicted RBP14.16□□□□□ -0.14
CTSB-214ENST00000527243 MINPP1Q9UNW1 487 aa14.16□□□□□ -0.14
CTSB-214ENST00000527243 NSFL1CQ9UNZ2 370 aaKnown RBP14.16□□□□□ -0.14
CTSB-214ENST00000527243 WDR90Q96KV7 1748 aa14.15□□□□□ -0.14
CTSB-214ENST00000527243 TRIM27P14373 513 aa14.15□□□□□ -0.14
CTSB-214ENST00000527243 INTS3Q68E01 1043 aaKnown RBP14.15□□□□□ -0.14
CTSB-214ENST00000527243 JDP2Q8WYK2 163 aa14.15□□□□□ -0.14
CTSB-214ENST00000527243 RRAGCQ9HB90 399 aa14.15□□□□□ -0.14
CTSB-214ENST00000527243 C1QTNF8P60827 252 aa14.14□□□□□ -0.15
CTSB-214ENST00000527243 ATF7IPQ6VMQ6 1270 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms