RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 TOGARAM1Q9Y4F4 1720 aa21.07■□□□□ 0.96
USH1C-205ENST00000527020 LMBR1LQ6UX01 489 aa21.07■□□□□ 0.96
USH1C-205ENST00000527020 SH2B1Q9NRF2 756 aaPredicted RBP21.07■□□□□ 0.96
USH1C-205ENST00000527020 DTNBO60941 627 aa21.07■□□□□ 0.96
USH1C-205ENST00000527020 KCNJ4P48050 445 aa21.07■□□□□ 0.96
USH1C-205ENST00000527020 DBNDD2Q9BQY9 259 aa21.07■□□□□ 0.96
USH1C-205ENST00000527020 NDUFB9Q9Y6M9 179 aa21.07■□□□□ 0.96
USH1C-205ENST00000527020 A1BGP04217 495 aa21.06■□□□□ 0.96
USH1C-205ENST00000527020 TRIM44Q96DX7 344 aaPredicted RBP21.06■□□□□ 0.96
USH1C-205ENST00000527020 TPCN1Q9ULQ1 816 aa21.06■□□□□ 0.96
USH1C-205ENST00000527020 TNS2Q63HR2 1409 aa21.06■□□□□ 0.96
USH1C-205ENST00000527020 TAF5LO75529 589 aa21.06■□□□□ 0.96
USH1C-205ENST00000527020 GJB2P29033 226 aa21.06■□□□□ 0.96
USH1C-205ENST00000527020 F13A1P00488 732 aa21.05■□□□□ 0.96
USH1C-205ENST00000527020 CNPY2Q9Y2B0 182 aa21.05■□□□□ 0.96
USH1C-205ENST00000527020 ZNF609O15014 1411 aa21.04■□□□□ 0.96
USH1C-205ENST00000527020 RFX7Q2KHR2 1363 aa21.04■□□□□ 0.96
USH1C-205ENST00000527020 CHGBP05060 677 aa21.04■□□□□ 0.96
USH1C-205ENST00000527020 IL2RBP14784 551 aa21.04■□□□□ 0.96
USH1C-205ENST00000527020 TSGA10IPQ3SY00 556 aa21.04■□□□□ 0.96
USH1C-205ENST00000527020 ATG9AQ7Z3C6 839 aa21.04■□□□□ 0.96
USH1C-205ENST00000527020 NECAB1Q8N987 351 aa21.04■□□□□ 0.96
USH1C-205ENST00000527020 HAUS7Q99871 368 aa21.04■□□□□ 0.96
USH1C-205ENST00000527020 CARD10Q9BWT7 1032 aa21.04■□□□□ 0.96
USH1C-205ENST00000527020 MTMR6Q9Y217 621 aa21.04■□□□□ 0.96
USH1C-205ENST00000527020 PSMA5P28066 241 aa21.03■□□□□ 0.96
USH1C-205ENST00000527020 USPL1Q5W0Q7 1092 aa21.03■□□□□ 0.96
USH1C-205ENST00000527020 ANO8Q9HCE9 1232 aaPredicted RBP21.03■□□□□ 0.96
USH1C-205ENST00000527020 CWC25Q9NXE8 425 aaPredicted RBP21.03■□□□□ 0.96
USH1C-205ENST00000527020 SLAIN2Q9P270 581 aa21.03■□□□□ 0.96
USH1C-205ENST00000527020 RNF20Q5VTR2 975 aa21.02■□□□□ 0.96
USH1C-205ENST00000527020 ANP32BQ92688 251 aaKnown RBP21.02■□□□□ 0.96
USH1C-205ENST00000527020 PDLIM2Q96JY6 352 aa21.02■□□□□ 0.96
USH1C-205ENST00000527020 ALDH8A1Q9H2A2 487 aaPredicted RBP21.02■□□□□ 0.96
USH1C-205ENST00000527020 RPS6KB1P23443 525 aa21.02■□□□□ 0.95
USH1C-205ENST00000527020 BLOC1S2Q6QNY1 142 aa21.02■□□□□ 0.95
USH1C-205ENST00000527020 TCEANC2Q96MN5 208 aa21.02■□□□□ 0.95
USH1C-205ENST00000527020 HMG20BQ9P0W2 317 aa21.02■□□□□ 0.95
USH1C-205ENST00000527020 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.02■□□□□ 0.95
USH1C-205ENST00000527020 TOB2Q14106 344 aaPredicted RBP21.01■□□□□ 0.95
USH1C-205ENST00000527020 DNAJC2Q99543 621 aaKnown RBP21.01■□□□□ 0.95
USH1C-205ENST00000527020 ZBTB3Q9H5J0 574 aa21.01■□□□□ 0.95
USH1C-205ENST00000527020 SEC62Q99442 399 aaKnown RBP21■□□□□ 0.95
USH1C-205ENST00000527020 CCDC129Q6ZRS4 1044 aa21■□□□□ 0.95
USH1C-205ENST00000527020 SYAP1Q96A49 352 aaPredicted RBP21■□□□□ 0.95
USH1C-205ENST00000527020 CHMP3Q9Y3E7 222 aa21■□□□□ 0.95
USH1C-205ENST00000527020 LAMA4Q16363 1823 aa21■□□□□ 0.95
USH1C-205ENST00000527020 CCDC191Q8NCU4 936 aa20.99■□□□□ 0.95
USH1C-205ENST00000527020 DDX46Q7L014 1031 aaKnown RBP20.99■□□□□ 0.95
USH1C-205ENST00000527020 STRN4Q9NRL3 753 aa20.98■□□□□ 0.95
USH1C-205ENST00000527020 ZNF335Q9H4Z2 1342 aaPredicted RBP20.98■□□□□ 0.95
USH1C-205ENST00000527020 GPR108Q9NPR9 543 aa20.97■□□□□ 0.95
USH1C-205ENST00000527020 ATP6V1DQ9Y5K8 247 aa20.97■□□□□ 0.95
USH1C-205ENST00000527020 NHSL1Q5SYE7 1610 aa20.97■□□□□ 0.95
USH1C-205ENST00000527020 PALLDQ8WX93 1383 aa20.97■□□□□ 0.95
USH1C-205ENST00000527020 ANKRD1Q15327 319 aa20.97■□□□□ 0.95
USH1C-205ENST00000527020 LRRC24Q50LG9 513 aa20.97■□□□□ 0.95
USH1C-205ENST00000527020 KBTBD3Q8NAB2 608 aa20.97■□□□□ 0.95
USH1C-205ENST00000527020 TSPY26PQ9H489 355 aa20.97■□□□□ 0.95
USH1C-205ENST00000527020 FIBPO43427 364 aa20.96■□□□□ 0.95
USH1C-205ENST00000527020 TIMM10P62072 90 aa20.96■□□□□ 0.95
USH1C-205ENST00000527020 UBE2HP62256 183 aa20.96■□□□□ 0.95
USH1C-205ENST00000527020 DNM1Q05193 864 aaKnown RBP20.96■□□□□ 0.95
USH1C-205ENST00000527020 MCMDC2Q4G0Z9 681 aa20.96■□□□□ 0.95
USH1C-205ENST00000527020 ZNF594Q96JF6 807 aaPredicted RBP20.96■□□□□ 0.95
USH1C-205ENST00000527020 CCDC9Q9Y3X0 531 aaKnown RBP20.96■□□□□ 0.95
USH1C-205ENST00000527020 IL15P40933 162 aaPredicted RBP20.96■□□□□ 0.95
USH1C-205ENST00000527020 RNF214Q8ND24 703 aa20.96■□□□□ 0.95
USH1C-205ENST00000527020 ISCA1Q9BUE6 129 aa20.96■□□□□ 0.95
USH1C-205ENST00000527020 SH3TC1Q8TE82 1336 aa20.96■□□□□ 0.95
USH1C-205ENST00000527020 ITGB4P16144 1822 aa20.95■□□□□ 0.94
USH1C-205ENST00000527020 VPS37CA5D8V6 355 aaPredicted RBP20.95■□□□□ 0.94
USH1C-205ENST00000527020 EYA2O00167 538 aa20.95■□□□□ 0.94
USH1C-205ENST00000527020 NEUROD6Q96NK8 337 aa20.95■□□□□ 0.94
USH1C-205ENST00000527020 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.94■□□□□ 0.94
USH1C-205ENST00000527020 SPEF2Q9C093 1822 aa20.94■□□□□ 0.94
USH1C-205ENST00000527020 PHF14O94880 888 aa20.94■□□□□ 0.94
USH1C-205ENST00000527020 CYP21A2P08686 494 aa20.94■□□□□ 0.94
USH1C-205ENST00000527020 KRT32Q14532 448 aa20.94■□□□□ 0.94
USH1C-205ENST00000527020 SLFNL1Q499Z3 407 aa20.94■□□□□ 0.94
USH1C-205ENST00000527020 CCDC183Q5T5S1 534 aa20.94■□□□□ 0.94
USH1C-205ENST00000527020 U3KPZ7 1027 aaPredicted RBP20.94■□□□□ 0.94
USH1C-205ENST00000527020 LARP1BQ659C4 914 aaKnown RBP20.93■□□□□ 0.94
USH1C-205ENST00000527020 CDC37L1Q7L3B6 337 aa20.93■□□□□ 0.94
USH1C-205ENST00000527020 ZSCAN30Q86W11 494 aa20.93■□□□□ 0.94
USH1C-205ENST00000527020 PUS3Q9BZE2 481 aaKnown RBP20.93■□□□□ 0.94
USH1C-205ENST00000527020 ATG3Q9NT62 314 aa20.93■□□□□ 0.94
USH1C-205ENST00000527020 PAG1Q9NWQ8 432 aa20.93■□□□□ 0.94
USH1C-205ENST00000527020 GOLIM4O00461 696 aa20.93■□□□□ 0.94
USH1C-205ENST00000527020 CIAO1O76071 339 aa20.93■□□□□ 0.94
USH1C-205ENST00000527020 HS1BP3Q53T59 392 aa20.93■□□□□ 0.94
USH1C-205ENST00000527020 NEK1Q96PY6 1258 aa20.93■□□□□ 0.94
USH1C-205ENST00000527020 EVA1CP58658 441 aa20.92■□□□□ 0.94
USH1C-205ENST00000527020 TCIRG1Q13488 830 aa20.92■□□□□ 0.94
USH1C-205ENST00000527020 TMOD3Q9NYL9 352 aa20.92■□□□□ 0.94
USH1C-205ENST00000527020 STOX1Q6ZVD7 989 aa20.91■□□□□ 0.94
USH1C-205ENST00000527020 A0A1B0GUL7 405 aa20.9■□□□□ 0.94
USH1C-205ENST00000527020 STK3Q13188 491 aa20.9■□□□□ 0.94
USH1C-205ENST00000527020 ASAP1Q9ULH1 1129 aa20.9■□□□□ 0.94
USH1C-205ENST00000527020 TPRNQ4KMQ1 711 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms