RNA–Protein interactions for RNA: ENST00000526846.1

CHD7-204, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-204ENST00000526846 CT47B1P0C2W7 299 aaPredicted RBP20.49■□□□□ 0.87
CHD7-204ENST00000526846 FKBP4Q02790 459 aaKnown RBP eCLIP20.49■□□□□ 0.87
CHD7-204ENST00000526846 GRAPQ13588 217 aa20.49■□□□□ 0.87
CHD7-204ENST00000526846 GCKRQ14397 625 aa20.49■□□□□ 0.87
CHD7-204ENST00000526846 ALDH1L2Q3SY69 923 aa20.49■□□□□ 0.87
CHD7-204ENST00000526846 CC2D2BQ6DHV5 1058 aa20.49■□□□□ 0.87
CHD7-204ENST00000526846 GRAPLQ8TC17 118 aaPredicted RBP20.49■□□□□ 0.87
CHD7-204ENST00000526846 PDE8AO60658 829 aa20.48■□□□□ 0.87
CHD7-204ENST00000526846 DDX46Q7L014 1031 aaKnown RBP20.48■□□□□ 0.87
CHD7-204ENST00000526846 RTKN2Q8IZC4 609 aa20.48■□□□□ 0.87
CHD7-204ENST00000526846 ATP6V0A2Q9Y487 856 aa20.48■□□□□ 0.87
CHD7-204ENST00000526846 BBOX1O75936 387 aa20.47■□□□□ 0.87
CHD7-204ENST00000526846 CELF1Q92879 486 aaKnown RBP20.47■□□□□ 0.87
CHD7-204ENST00000526846 PSMD1Q99460 953 aa20.47■□□□□ 0.87
CHD7-204ENST00000526846 WDR90Q96KV7 1748 aa20.47■□□□□ 0.87
CHD7-204ENST00000526846 HSP90B1P14625 803 aaKnown RBP20.46■□□□□ 0.87
CHD7-204ENST00000526846 UBE3BQ7Z3V4 1068 aa20.46■□□□□ 0.87
CHD7-204ENST00000526846 BCL2L13Q9BXK5 485 aa20.46■□□□□ 0.87
CHD7-204ENST00000526846 A0A1B0GUL6 1792 aa20.45■□□□□ 0.86
CHD7-204ENST00000526846 SP8Q8IXZ3 490 aa20.45■□□□□ 0.86
CHD7-204ENST00000526846 ZNF526Q8TF50 670 aaPredicted RBP20.45■□□□□ 0.86
CHD7-204ENST00000526846 PLA2G12BQ9BX93 195 aa20.45■□□□□ 0.86
CHD7-204ENST00000526846 ZNF277Q9NRM2 450 aaPredicted RBP20.45■□□□□ 0.86
CHD7-204ENST00000526846 PTPRCP08575 1304 aa20.45■□□□□ 0.86
CHD7-204ENST00000526846 ZBED9Q6R2W3 1325 aa20.45■□□□□ 0.86
CHD7-204ENST00000526846 RTL9Q8NET4 1388 aa20.45■□□□□ 0.86
CHD7-204ENST00000526846 BRPF1P55201 1214 aaPredicted RBP20.44■□□□□ 0.86
CHD7-204ENST00000526846 CTSWP56202 376 aa20.44■□□□□ 0.86
CHD7-204ENST00000526846 GRIPAP1Q4V328 841 aa20.44■□□□□ 0.86
CHD7-204ENST00000526846 GPBP1L1Q9HC44 474 aaPredicted RBP20.44■□□□□ 0.86
CHD7-204ENST00000526846 SEC31BQ9NQW1 1179 aa20.44■□□□□ 0.86
CHD7-204ENST00000526846 TMC4Q7Z404 712 aa20.43■□□□□ 0.86
CHD7-204ENST00000526846 TTLL11Q8NHH1 800 aa20.43■□□□□ 0.86
CHD7-204ENST00000526846 KIF3CO14782 793 aa20.42■□□□□ 0.86
CHD7-204ENST00000526846 ALDH1L1O75891 902 aa20.42■□□□□ 0.86
CHD7-204ENST00000526846 IARSP41252 1262 aaKnown RBP20.42■□□□□ 0.86
CHD7-204ENST00000526846 RARSP54136 660 aaKnown RBP20.42■□□□□ 0.86
CHD7-204ENST00000526846 CCDC152Q4G0S7 254 aa20.42■□□□□ 0.86
CHD7-204ENST00000526846 RTFDC1Q9BY42 306 aaPredicted RBP20.42■□□□□ 0.86
CHD7-204ENST00000526846 SMC4Q9NTJ3 1288 aa20.42■□□□□ 0.86
CHD7-204ENST00000526846 GLTPD2A6NH11 291 aa20.4■□□□□ 0.86
CHD7-204ENST00000526846 RPS8P62241 208 aaKnown RBP20.4■□□□□ 0.86
CHD7-204ENST00000526846 SLC4A10Q6U841 1118 aa20.4■□□□□ 0.86
CHD7-204ENST00000526846 CCDC85AQ96PX6 553 aaPredicted RBP20.4■□□□□ 0.86
CHD7-204ENST00000526846 SRCIN1Q9C0H9 1055 aa20.4■□□□□ 0.86
CHD7-204ENST00000526846 NMRK2Q9NPI5 230 aa20.4■□□□□ 0.86
CHD7-204ENST00000526846 SCN4AP35499 1836 aa20.39■□□□□ 0.86
CHD7-204ENST00000526846 GRM8O00222 908 aa20.39■□□□□ 0.85
CHD7-204ENST00000526846 CSF1RP07333 972 aa20.39■□□□□ 0.85
CHD7-204ENST00000526846 GREM2Q9H772 168 aa20.39■□□□□ 0.85
CHD7-204ENST00000526846 UTYO14607 1347 aa20.38■□□□□ 0.85
CHD7-204ENST00000526846 KDM2BQ8NHM5 1336 aa20.38■□□□□ 0.85
CHD7-204ENST00000526846 FOXO4P98177 505 aa20.38■□□□□ 0.85
CHD7-204ENST00000526846 FZD9O00144 591 aa20.37■□□□□ 0.85
CHD7-204ENST00000526846 MPNDQ8N594 471 aa20.37■□□□□ 0.85
CHD7-204ENST00000526846 PSME4Q14997 1843 aa20.37■□□□□ 0.85
CHD7-204ENST00000526846 ZNF541Q9H0D2 1346 aa20.36■□□□□ 0.85
CHD7-204ENST00000526846 POTECB2RU33 542 aa20.36■□□□□ 0.85
CHD7-204ENST00000526846 FAM161AQ3B820 660 aa20.36■□□□□ 0.85
CHD7-204ENST00000526846 EPHA10Q5JZY3 1008 aa20.36■□□□□ 0.85
CHD7-204ENST00000526846 DPP8Q6V1X1 898 aaPredicted RBP20.36■□□□□ 0.85
CHD7-204ENST00000526846 NOB1Q9ULX3 412 aaKnown RBP20.36■□□□□ 0.85
CHD7-204ENST00000526846 GPSM2P81274 684 aa20.35■□□□□ 0.85
CHD7-204ENST00000526846 KAZALD1Q96I82 304 aa20.35■□□□□ 0.85
CHD7-204ENST00000526846 TMX4Q9H1E5 349 aaPredicted RBP20.35■□□□□ 0.85
CHD7-204ENST00000526846 VPS33BQ9H267 617 aa20.35■□□□□ 0.85
CHD7-204ENST00000526846 SCN9AQ15858 1988 aa20.35■□□□□ 0.85
CHD7-204ENST00000526846 ZNF646O15015 1829 aaPredicted RBP20.34■□□□□ 0.85
CHD7-204ENST00000526846 NBPF7P0C2Y1 421 aaPredicted RBP20.34■□□□□ 0.85
CHD7-204ENST00000526846 KIAA2012Q0VF49 1180 aa20.34■□□□□ 0.85
CHD7-204ENST00000526846 AOC3Q16853 763 aa20.34■□□□□ 0.85
CHD7-204ENST00000526846 ANKRD18AQ8IVF6 992 aa20.34■□□□□ 0.85
CHD7-204ENST00000526846 SUPT20HQ8NEM7 779 aa20.34■□□□□ 0.85
CHD7-204ENST00000526846 CDC5LQ99459 802 aaKnown RBP20.34■□□□□ 0.85
CHD7-204ENST00000526846 PODXL2Q9NZ53 605 aa20.34■□□□□ 0.85
CHD7-204ENST00000526846 KIF16BQ96L93 1317 aa20.33■□□□□ 0.85
CHD7-204ENST00000526846 PPIP5K2O43314 1243 aa20.33■□□□□ 0.85
CHD7-204ENST00000526846 ITGA6P23229 1130 aa20.33■□□□□ 0.85
CHD7-204ENST00000526846 LARGE2Q8N3Y3 721 aa20.33■□□□□ 0.85
CHD7-204ENST00000526846 SUCLG2Q96I99 432 aa20.33■□□□□ 0.85
CHD7-204ENST00000526846 RRAGCQ9HB90 399 aa20.33■□□□□ 0.85
CHD7-204ENST00000526846 C9orf78Q9NZ63 289 aaPredicted RBP20.33■□□□□ 0.85
CHD7-204ENST00000526846 POLLQ9UGP5 575 aa20.33■□□□□ 0.85
CHD7-204ENST00000526846 DDNO94850 711 aaPredicted RBP20.32■□□□□ 0.84
CHD7-204ENST00000526846 C1QTNF8P60827 252 aa20.32■□□□□ 0.84
CHD7-204ENST00000526846 DPY19L2Q6NUT2 758 aa20.32■□□□□ 0.84
CHD7-204ENST00000526846 ARHGAP45Q92619 1136 aa20.32■□□□□ 0.84
CHD7-204ENST00000526846 USP44Q9H0E7 712 aa20.32■□□□□ 0.84
CHD7-204ENST00000526846 BSDC1Q9NW68 430 aaPredicted RBP20.32■□□□□ 0.84
CHD7-204ENST00000526846 ADAMTSL1Q8N6G6 1762 aa20.31■□□□□ 0.84
CHD7-204ENST00000526846 BCAR3O75815 825 aa20.31■□□□□ 0.84
CHD7-204ENST00000526846 TBC1D16Q8TBP0 767 aa20.31■□□□□ 0.84
CHD7-204ENST00000526846 JDP2Q8WYK2 163 aa20.31■□□□□ 0.84
CHD7-204ENST00000526846 L3MBTL3Q96JM7 780 aaPredicted RBP20.31■□□□□ 0.84
CHD7-204ENST00000526846 API5Q9BZZ5 524 aaKnown RBP20.31■□□□□ 0.84
CHD7-204ENST00000526846 NSFL1CQ9UNZ2 370 aaKnown RBP20.31■□□□□ 0.84
CHD7-204ENST00000526846 LMBR1LQ6UX01 489 aa20.3■□□□□ 0.84
CHD7-204ENST00000526846 RABL6Q3YEC7 729 aaPredicted RBP20.29■□□□□ 0.84
CHD7-204ENST00000526846 NIM1KQ8IY84 436 aa20.29■□□□□ 0.84
CHD7-204ENST00000526846 MINPP1Q9UNW1 487 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms