RNA–Protein interactions for RNA: ENST00000526216.1

COLCA2-202, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-202ENST00000526216 PDE8AO60658 829 aa17.91■□□□□ 0.46
COLCA2-202ENST00000526216 CTSWP56202 376 aa17.91■□□□□ 0.46
COLCA2-202ENST00000526216 PTPN12Q05209 780 aaKnown RBP17.91■□□□□ 0.46
COLCA2-202ENST00000526216 FAM161AQ3B820 660 aa17.91■□□□□ 0.46
COLCA2-202ENST00000526216 TTLL11Q8NHH1 800 aa17.91■□□□□ 0.46
COLCA2-202ENST00000526216 NRXN2Q9P2S2 1712 aa17.9■□□□□ 0.46
COLCA2-202ENST00000526216 LRP5O75197 1615 aa17.9■□□□□ 0.46
COLCA2-202ENST00000526216 SMARCA5O60264 1052 aaPredicted RBP17.9■□□□□ 0.46
COLCA2-202ENST00000526216 CCDC24Q8N4L8 307 aa17.9■□□□□ 0.46
COLCA2-202ENST00000526216 CCDC85AQ96PX6 553 aaPredicted RBP17.9■□□□□ 0.46
COLCA2-202ENST00000526216 PDGFDQ9GZP0 370 aaPredicted RBP17.9■□□□□ 0.46
COLCA2-202ENST00000526216 APBB1O00213 710 aa17.89■□□□□ 0.45
COLCA2-202ENST00000526216 POLRMTO00411 1230 aaKnown RBP17.89■□□□□ 0.45
COLCA2-202ENST00000526216 SURF6O75683 361 aaKnown RBP17.89■□□□□ 0.45
COLCA2-202ENST00000526216 SLC10A5Q5PT55 438 aa17.89■□□□□ 0.45
COLCA2-202ENST00000526216 ANKRD45Q5TZF3 282 aa17.89■□□□□ 0.45
COLCA2-202ENST00000526216 CHD1LQ86WJ1 897 aa17.89■□□□□ 0.45
COLCA2-202ENST00000526216 NBPF5PQ86XG9 351 aaPredicted RBP17.89■□□□□ 0.45
COLCA2-202ENST00000526216 LNPKQ9C0E8 428 aa17.89■□□□□ 0.45
COLCA2-202ENST00000526216 COPRSQ9NQ92 184 aa17.89■□□□□ 0.45
COLCA2-202ENST00000526216 CHMP3Q9Y3E7 222 aa17.89■□□□□ 0.45
COLCA2-202ENST00000526216 NYXQ9GZU5 481 aa17.88■□□□□ 0.45
COLCA2-202ENST00000526216 GREM2Q9H772 168 aa17.88■□□□□ 0.45
COLCA2-202ENST00000526216 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.88■□□□□ 0.45
COLCA2-202ENST00000526216 MSL1Q68DK7 614 aa17.87■□□□□ 0.45
COLCA2-202ENST00000526216 PRR5LQ6MZQ0 368 aa17.87■□□□□ 0.45
COLCA2-202ENST00000526216 ZNF594Q96JF6 807 aaPredicted RBP17.87■□□□□ 0.45
COLCA2-202ENST00000526216 RIC1Q4ADV7 1423 aa17.87■□□□□ 0.45
COLCA2-202ENST00000526216 SASH1O94885 1247 aa17.86■□□□□ 0.45
COLCA2-202ENST00000526216 SERPINB2P05120 415 aa17.86■□□□□ 0.45
COLCA2-202ENST00000526216 SIL1Q9H173 461 aa17.86■□□□□ 0.45
COLCA2-202ENST00000526216 RTL9Q8NET4 1388 aa17.85■□□□□ 0.45
COLCA2-202ENST00000526216 RGS3P49796 1198 aa17.85■□□□□ 0.45
COLCA2-202ENST00000526216 TPTE2Q6XPS3 522 aa17.85■□□□□ 0.45
COLCA2-202ENST00000526216 C16orf71Q8IYS4 520 aaPredicted RBP17.85■□□□□ 0.45
COLCA2-202ENST00000526216 NLGN1Q8N2Q7 840 aa17.85■□□□□ 0.45
COLCA2-202ENST00000526216 RHPN1Q8TCX5 695 aa17.85■□□□□ 0.45
COLCA2-202ENST00000526216 OTUD7AQ8TE49 926 aaPredicted RBP17.85■□□□□ 0.45
COLCA2-202ENST00000526216 ANKRD31Q8N7Z5 1873 aa17.84■□□□□ 0.45
COLCA2-202ENST00000526216 RAB11FIP3O75154 756 aa17.84■□□□□ 0.45
COLCA2-202ENST00000526216 ITGA6P23229 1130 aa17.84■□□□□ 0.45
COLCA2-202ENST00000526216 SF3B3Q15393 1217 aaKnown RBP17.84■□□□□ 0.45
COLCA2-202ENST00000526216 ATG9AQ7Z3C6 839 aa17.84■□□□□ 0.45
COLCA2-202ENST00000526216 CNBD1Q8NA66 436 aa17.84■□□□□ 0.45
COLCA2-202ENST00000526216 PUS3Q9BZE2 481 aaKnown RBP17.84■□□□□ 0.45
COLCA2-202ENST00000526216 LRRCC1Q9C099 1032 aa17.84■□□□□ 0.45
COLCA2-202ENST00000526216 SEC31BQ9NQW1 1179 aa17.84■□□□□ 0.45
COLCA2-202ENST00000526216 SALL3Q9BXA9 1300 aa17.83■□□□□ 0.45
COLCA2-202ENST00000526216 LRRC24Q50LG9 513 aa17.83■□□□□ 0.44
COLCA2-202ENST00000526216 IL1RAPL2Q9NP60 686 aa17.83■□□□□ 0.44
COLCA2-202ENST00000526216 SPEF2Q9C093 1822 aa17.82■□□□□ 0.44
COLCA2-202ENST00000526216 MMP10P09238 476 aa17.82■□□□□ 0.44
COLCA2-202ENST00000526216 GTF2E1P29083 439 aaPredicted RBP17.82■□□□□ 0.44
COLCA2-202ENST00000526216 IFIT5Q13325 482 aaKnown RBP17.82■□□□□ 0.44
COLCA2-202ENST00000526216 CCDC57Q2TAC2 916 aa17.82■□□□□ 0.44
COLCA2-202ENST00000526216 KIF1BPQ96EK5 621 aa17.82■□□□□ 0.44
COLCA2-202ENST00000526216 TAF1P21675 1872 aa17.82■□□□□ 0.44
COLCA2-202ENST00000526216 ANKRD18BA2A2Z9 1011 aa17.81■□□□□ 0.44
COLCA2-202ENST00000526216 EYA2O00167 538 aa17.81■□□□□ 0.44
COLCA2-202ENST00000526216 G3BP1Q13283 466 aaKnown RBP eCLIP17.81■□□□□ 0.44
COLCA2-202ENST00000526216 CCDC152Q4G0S7 254 aa17.81■□□□□ 0.44
COLCA2-202ENST00000526216 HSP90AB4PQ58FF6 505 aa17.81■□□□□ 0.44
COLCA2-202ENST00000526216 HSP90B1P14625 803 aaKnown RBP17.8■□□□□ 0.44
COLCA2-202ENST00000526216 OS9Q13438 667 aaPredicted RBP17.8■□□□□ 0.44
COLCA2-202ENST00000526216 CIAO1O76071 339 aa17.79■□□□□ 0.44
COLCA2-202ENST00000526216 TFCP2Q12800 502 aa17.79■□□□□ 0.44
COLCA2-202ENST00000526216 ERC1Q8IUD2 1116 aa17.79■□□□□ 0.44
COLCA2-202ENST00000526216 PLEKHM2Q8IWE5 1019 aa17.79■□□□□ 0.44
COLCA2-202ENST00000526216 NLRP3Q96P20 1036 aa17.79■□□□□ 0.44
COLCA2-202ENST00000526216 BCL11AQ9H165 835 aa17.79■□□□□ 0.44
COLCA2-202ENST00000526216 A0A1B0GUL6 1792 aa17.79■□□□□ 0.44
COLCA2-202ENST00000526216 COL11A2P13942 1736 aaPredicted RBP17.79■□□□□ 0.44
COLCA2-202ENST00000526216 RIPOR2Q9Y4F9 1068 aa17.78■□□□□ 0.44
COLCA2-202ENST00000526216 IL15P40933 162 aaPredicted RBP17.77■□□□□ 0.44
COLCA2-202ENST00000526216 ST5P78524 1137 aa17.77■□□□□ 0.44
COLCA2-202ENST00000526216 TAF7LQ5H9L4 462 aa17.77■□□□□ 0.44
COLCA2-202ENST00000526216 EAF2Q96CJ1 260 aaPredicted RBP17.77■□□□□ 0.44
COLCA2-202ENST00000526216 FBXO3Q9UK99 471 aa17.77■□□□□ 0.44
COLCA2-202ENST00000526216 PARP3Q9Y6F1 533 aa17.77■□□□□ 0.44
COLCA2-202ENST00000526216 KLRG2A4D1S0 409 aaPredicted RBP17.76■□□□□ 0.43
COLCA2-202ENST00000526216 NPHP1O15259 732 aa17.76■□□□□ 0.43
COLCA2-202ENST00000526216 CRY2Q49AN0 593 aa17.76■□□□□ 0.43
COLCA2-202ENST00000526216 CELF1Q92879 486 aaKnown RBP17.76■□□□□ 0.43
COLCA2-202ENST00000526216 ZNF609O15014 1411 aa17.76■□□□□ 0.43
COLCA2-202ENST00000526216 R3HDM1Q15032 1099 aaKnown RBP17.75■□□□□ 0.43
COLCA2-202ENST00000526216 LDHAL6AQ6ZMR3 332 aa17.75■□□□□ 0.43
COLCA2-202ENST00000526216 SLC51AQ86UW1 340 aa17.75■□□□□ 0.43
COLCA2-202ENST00000526216 VGLL2Q8N8G2 317 aa17.75■□□□□ 0.43
COLCA2-202ENST00000526216 SLC16A10Q8TF71 515 aa17.75■□□□□ 0.43
COLCA2-202ENST00000526216 TLR7Q9NYK1 1049 aaKnown RBP17.75■□□□□ 0.43
COLCA2-202ENST00000526216 TNNI3KQ59H18 835 aa17.74■□□□□ 0.43
COLCA2-202ENST00000526216 TSHZ3Q63HK5 1081 aa17.74■□□□□ 0.43
COLCA2-202ENST00000526216 ZBTB47Q9UFB7 747 aaPredicted RBP17.74■□□□□ 0.43
COLCA2-202ENST00000526216 FPGT-TNNI3KV9GXZ4 949 aa17.74■□□□□ 0.43
COLCA2-202ENST00000526216 PDE1AP54750 535 aa17.73■□□□□ 0.43
COLCA2-202ENST00000526216 AACSQ86V21 672 aa17.73■□□□□ 0.43
COLCA2-202ENST00000526216 BRIP1Q9BX63 1249 aa17.73■□□□□ 0.43
COLCA2-202ENST00000526216 CCDC8Q9H0W5 538 aaPredicted RBP17.73■□□□□ 0.43
COLCA2-202ENST00000526216 OSBPL3Q9H4L5 887 aa17.73■□□□□ 0.43
COLCA2-202ENST00000526216 CNNM1Q9NRU3 951 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms