RNA–Protein interactions for RNA: ENST00000524509.1

PACSIN3-202, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 554 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-202ENST00000524509 TAOK3Q9H2K8 898 aa22.22■■□□□ 1.15
PACSIN3-202ENST00000524509 RIC1Q4ADV7 1423 aa22.22■■□□□ 1.15
PACSIN3-202ENST00000524509 BEND3Q5T5X7 828 aa22.21■■□□□ 1.15
PACSIN3-202ENST00000524509 ZNF219Q9P2Y4 722 aaPredicted RBP22.21■■□□□ 1.15
PACSIN3-202ENST00000524509 HDAC5Q9UQL6 1122 aa22.21■■□□□ 1.15
PACSIN3-202ENST00000524509 NUP98P52948 1817 aa22.21■■□□□ 1.15
PACSIN3-202ENST00000524509 F6X3S4 739 aa22.2■■□□□ 1.14
PACSIN3-202ENST00000524509 DDNO94850 711 aaPredicted RBP22.2■■□□□ 1.14
PACSIN3-202ENST00000524509 IGKV5-2P06315 115 aa22.2■■□□□ 1.14
PACSIN3-202ENST00000524509 POTEIP0CG38 1075 aa22.2■■□□□ 1.14
PACSIN3-202ENST00000524509 POTEJP0CG39 1038 aa22.2■■□□□ 1.14
PACSIN3-202ENST00000524509 ATF7IPQ6VMQ6 1270 aa22.2■■□□□ 1.14
PACSIN3-202ENST00000524509 FRAT1Q92837 279 aaPredicted RBP22.2■■□□□ 1.14
PACSIN3-202ENST00000524509 PRDM10Q9NQV6 1147 aa22.2■■□□□ 1.14
PACSIN3-202ENST00000524509 CNTNAP1P78357 1384 aa22.2■■□□□ 1.14
PACSIN3-202ENST00000524509 KLRG2A4D1S0 409 aaPredicted RBP22.19■■□□□ 1.14
PACSIN3-202ENST00000524509 BCAR3O75815 825 aa22.19■■□□□ 1.14
PACSIN3-202ENST00000524509 GCKRQ14397 625 aa22.19■■□□□ 1.14
PACSIN3-202ENST00000524509 NUTM1Q86Y26 1132 aa22.19■■□□□ 1.14
PACSIN3-202ENST00000524509 CNKSR1Q969H4 720 aa22.19■■□□□ 1.14
PACSIN3-202ENST00000524509 PASKQ96RG2 1323 aa22.18■■□□□ 1.14
PACSIN3-202ENST00000524509 IQCA1LA6NCM1 817 aa22.18■■□□□ 1.14
PACSIN3-202ENST00000524509 FOXN1O15353 648 aa22.18■■□□□ 1.14
PACSIN3-202ENST00000524509 SOGA3Q5TF21 947 aa22.18■■□□□ 1.14
PACSIN3-202ENST00000524509 C9orf78Q9NZ63 289 aaPredicted RBP22.18■■□□□ 1.14
PACSIN3-202ENST00000524509 SLX4Q8IY92 1834 aa22.17■■□□□ 1.14
PACSIN3-202ENST00000524509 CDHR2Q9BYE9 1310 aa22.17■■□□□ 1.14
PACSIN3-202ENST00000524509 IRS4O14654 1257 aaPredicted RBP22.17■■□□□ 1.14
PACSIN3-202ENST00000524509 NPR1P16066 1061 aa22.17■■□□□ 1.14
PACSIN3-202ENST00000524509 ALDH1B1P30837 517 aa22.17■■□□□ 1.14
PACSIN3-202ENST00000524509 CWF19L2Q2TBE0 894 aaKnown RBP22.17■■□□□ 1.14
PACSIN3-202ENST00000524509 STYK1Q6J9G0 422 aa22.17■■□□□ 1.14
PACSIN3-202ENST00000524509 CCDC24Q8N4L8 307 aa22.17■■□□□ 1.14
PACSIN3-202ENST00000524509 FAM89AQ96GI7 184 aa22.17■■□□□ 1.14
PACSIN3-202ENST00000524509 MASTLQ96GX5 879 aa22.17■■□□□ 1.14
PACSIN3-202ENST00000524509 SCN4AP35499 1836 aa22.17■■□□□ 1.14
PACSIN3-202ENST00000524509 ARFGEF2Q9Y6D5 1785 aa22.17■■□□□ 1.14
PACSIN3-202ENST00000524509 SRGNP10124 158 aa22.16■■□□□ 1.14
PACSIN3-202ENST00000524509 LDHDQ86WU2 507 aa22.16■■□□□ 1.14
PACSIN3-202ENST00000524509 FTSJ3Q8IY81 847 aaKnown RBP22.16■■□□□ 1.14
PACSIN3-202ENST00000524509 RPGRQ92834 1020 aaKnown RBP22.16■■□□□ 1.14
PACSIN3-202ENST00000524509 L3MBTL3Q96JM7 780 aaPredicted RBP22.16■■□□□ 1.14
PACSIN3-202ENST00000524509 H7C1W4 665 aa22.15■■□□□ 1.14
PACSIN3-202ENST00000524509 PRPF40BQ6NWY9 871 aaKnown RBP22.15■■□□□ 1.14
PACSIN3-202ENST00000524509 CACNA1SQ13698 1873 aa22.15■■□□□ 1.14
PACSIN3-202ENST00000524509 ANKRD36CQ5JPF3 1778 aa22.15■■□□□ 1.14
PACSIN3-202ENST00000524509 GRM8O00222 908 aa22.14■■□□□ 1.13
PACSIN3-202ENST00000524509 PDE8AO60658 829 aa22.14■■□□□ 1.13
PACSIN3-202ENST00000524509 CRY2Q49AN0 593 aa22.14■■□□□ 1.13
PACSIN3-202ENST00000524509 RBM17Q96I25 401 aaKnown RBP22.14■■□□□ 1.13
PACSIN3-202ENST00000524509 TRIM27P14373 513 aa22.13■■□□□ 1.13
PACSIN3-202ENST00000524509 CTCFP49711 727 aaPredicted RBP22.13■■□□□ 1.13
PACSIN3-202ENST00000524509 INTS3Q68E01 1043 aaKnown RBP22.13■■□□□ 1.13
PACSIN3-202ENST00000524509 TAF1DQ9H5J8 278 aaPredicted RBP22.13■■□□□ 1.13
PACSIN3-202ENST00000524509 ABCC4O15439 1325 aa22.12■■□□□ 1.13
PACSIN3-202ENST00000524509 HCLS1P14317 486 aaPredicted RBP22.12■■□□□ 1.13
PACSIN3-202ENST00000524509 SF3B3Q15393 1217 aaKnown RBP22.12■■□□□ 1.13
PACSIN3-202ENST00000524509 CCDC152Q4G0S7 254 aa22.12■■□□□ 1.13
PACSIN3-202ENST00000524509 UBE3BQ7Z3V4 1068 aa22.12■■□□□ 1.13
PACSIN3-202ENST00000524509 DZIP1LQ8IYY4 767 aaKnown RBP22.12■■□□□ 1.13
PACSIN3-202ENST00000524509 AIDAQ96BJ3 306 aa22.12■■□□□ 1.13
PACSIN3-202ENST00000524509 TMEM88BA6NKF7 163 aa22.11■■□□□ 1.13
PACSIN3-202ENST00000524509 ITGBL1O95965 494 aaPredicted RBP22.11■■□□□ 1.13
PACSIN3-202ENST00000524509 HOXA10P31260 410 aaPredicted RBP22.11■■□□□ 1.13
PACSIN3-202ENST00000524509 VEGFBP49765 207 aa22.11■■□□□ 1.13
PACSIN3-202ENST00000524509 DDX46Q7L014 1031 aaKnown RBP22.11■■□□□ 1.13
PACSIN3-202ENST00000524509 PLA2G12BQ9BX93 195 aa22.11■■□□□ 1.13
PACSIN3-202ENST00000524509 TMX4Q9H1E5 349 aaPredicted RBP22.11■■□□□ 1.13
PACSIN3-202ENST00000524509 CHMP4BQ9H444 224 aaKnown RBP22.11■■□□□ 1.13
PACSIN3-202ENST00000524509 ABCC12Q96J65 1359 aa22.11■■□□□ 1.13
PACSIN3-202ENST00000524509 RTL5Q5HYW3 569 aaPredicted RBP22.1■■□□□ 1.13
PACSIN3-202ENST00000524509 C7orf43Q8WVR3 580 aa22.1■■□□□ 1.13
PACSIN3-202ENST00000524509 CRAMP1Q96RY5 1269 aa22.1■■□□□ 1.13
PACSIN3-202ENST00000524509 UTYO14607 1347 aa22.09■■□□□ 1.13
PACSIN3-202ENST00000524509 GNAI3P08754 354 aa22.09■■□□□ 1.13
PACSIN3-202ENST00000524509 TMC4Q7Z404 712 aa22.09■■□□□ 1.13
PACSIN3-202ENST00000524509 WBP1LQ9NX94 342 aa22.09■■□□□ 1.13
PACSIN3-202ENST00000524509 GRIPAP1Q4V328 841 aa22.08■■□□□ 1.13
PACSIN3-202ENST00000524509 CCDC93Q567U6 631 aa22.08■■□□□ 1.13
PACSIN3-202ENST00000524509 ADAMTSL1Q8N6G6 1762 aa22.07■■□□□ 1.12
PACSIN3-202ENST00000524509 BBOX1O75936 387 aa22.07■■□□□ 1.12
PACSIN3-202ENST00000524509 SYNE4Q8N205 404 aa22.07■■□□□ 1.12
PACSIN3-202ENST00000524509 UBTFL1P0CB47 393 aaPredicted RBP22.06■■□□□ 1.12
PACSIN3-202ENST00000524509 CASP7P55210 303 aa22.06■■□□□ 1.12
PACSIN3-202ENST00000524509 CTSWP56202 376 aa22.06■■□□□ 1.12
PACSIN3-202ENST00000524509 FKBP4Q02790 459 aaKnown RBP eCLIP22.06■■□□□ 1.128e-10■□□□□ 10.2
PACSIN3-202ENST00000524509 PDE3AQ14432 1141 aa22.06■■□□□ 1.12
PACSIN3-202ENST00000524509 CC2D2BQ6DHV5 1058 aa22.06■■□□□ 1.12
PACSIN3-202ENST00000524509 CLUAP1Q96AJ1 413 aa22.06■■□□□ 1.12
PACSIN3-202ENST00000524509 HACL1Q9UJ83 578 aa22.06■■□□□ 1.12
PACSIN3-202ENST00000524509 EAPPQ56P03 285 aaPredicted RBP22.05■■□□□ 1.12
PACSIN3-202ENST00000524509 USP44Q9H0E7 712 aa22.05■■□□□ 1.12
PACSIN3-202ENST00000524509 ZNF541Q9H0D2 1346 aa22.05■■□□□ 1.12
PACSIN3-202ENST00000524509 RASSF10A6NK89 507 aa22.04■■□□□ 1.12
PACSIN3-202ENST00000524509 LBX1P52954 281 aa22.04■■□□□ 1.12
PACSIN3-202ENST00000524509 PNMA8AQ86V59 439 aaPredicted RBP22.04■■□□□ 1.12
PACSIN3-202ENST00000524509 CDC5LQ99459 802 aaKnown RBP22.04■■□□□ 1.12
PACSIN3-202ENST00000524509 RTL9Q8NET4 1388 aa22.03■■□□□ 1.12
PACSIN3-202ENST00000524509 EPHX2P34913 555 aa22.03■■□□□ 1.12
PACSIN3-202ENST00000524509 GRAPQ13588 217 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms