RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 RTL5Q5HYW3 569 aaPredicted RBP19.14■□□□□ 0.65
SF3B2-202ENST00000524475 SLC4A10Q6U841 1118 aa19.14■□□□□ 0.65
SF3B2-202ENST00000524475 GRAPLQ8TC17 118 aaPredicted RBP19.14■□□□□ 0.65
SF3B2-202ENST00000524475 NOB1Q9ULX3 412 aaKnown RBP19.14■□□□□ 0.65
SF3B2-202ENST00000524475 LRRC37AA6NMS7 1700 aa19.14■□□□□ 0.65
SF3B2-202ENST00000524475 NFKBIEO00221 500 aa19.13■□□□□ 0.65
SF3B2-202ENST00000524475 GRM8O00222 908 aa19.13■□□□□ 0.65
SF3B2-202ENST00000524475 CTSWP56202 376 aa19.13■□□□□ 0.65
SF3B2-202ENST00000524475 UTYO14607 1347 aa19.13■□□□□ 0.65
SF3B2-202ENST00000524475 PPEF1O14829 653 aaPredicted RBP19.12■□□□□ 0.65
SF3B2-202ENST00000524475 IPO8O15397 1037 aaKnown RBP19.12■□□□□ 0.65
SF3B2-202ENST00000524475 RTKN2Q8IZC4 609 aa19.12■□□□□ 0.65
SF3B2-202ENST00000524475 ZC3H4Q9UPT8 1303 aaKnown RBP19.11■□□□□ 0.65
SF3B2-202ENST00000524475 YY1P25490 414 aa19.11■□□□□ 0.65
SF3B2-202ENST00000524475 CCT4P50991 539 aaKnown RBP19.11■□□□□ 0.65
SF3B2-202ENST00000524475 TTLL11Q8NHH1 800 aa19.11■□□□□ 0.65
SF3B2-202ENST00000524475 ATP6V0A2Q9Y487 856 aa19.11■□□□□ 0.65
SF3B2-202ENST00000524475 DICER1Q9UPY3 1922 aaKnown RBP19.11■□□□□ 0.65
SF3B2-202ENST00000524475 TAF1P21675 1872 aa19.1■□□□□ 0.65
SF3B2-202ENST00000524475 BCAR3O75815 825 aa19.1■□□□□ 0.65
SF3B2-202ENST00000524475 CSF1RP07333 972 aa19.1■□□□□ 0.65
SF3B2-202ENST00000524475 LMNB1P20700 586 aa19.1■□□□□ 0.65
SF3B2-202ENST00000524475 SP8Q8IXZ3 490 aa19.1■□□□□ 0.65
SF3B2-202ENST00000524475 JARID2Q92833 1246 aaPredicted RBP19.1■□□□□ 0.65
SF3B2-202ENST00000524475 PSMD1Q99460 953 aa19.1■□□□□ 0.65
SF3B2-202ENST00000524475 TAOK3Q9H2K8 898 aa19.1■□□□□ 0.65
SF3B2-202ENST00000524475 C9orf78Q9NZ63 289 aaPredicted RBP19.1■□□□□ 0.65
SF3B2-202ENST00000524475 FKBP4Q02790 459 aaKnown RBP eCLIP19.09■□□□□ 0.65
SF3B2-202ENST00000524475 ATF7IPQ6VMQ6 1270 aa19.09■□□□□ 0.65
SF3B2-202ENST00000524475 CCDC88AQ3V6T2 1871 aa19.09■□□□□ 0.65
SF3B2-202ENST00000524475 CELF1Q92879 486 aaKnown RBP19.08■□□□□ 0.64
SF3B2-202ENST00000524475 TMX4Q9H1E5 349 aaPredicted RBP19.08■□□□□ 0.64
SF3B2-202ENST00000524475 COL4A1P02462 1669 aa19.08■□□□□ 0.64
SF3B2-202ENST00000524475 TRIM27P14373 513 aa19.07■□□□□ 0.64
SF3B2-202ENST00000524475 RPS8P62241 208 aaKnown RBP19.07■□□□□ 0.64
SF3B2-202ENST00000524475 RASSF7Q02833 373 aa19.07■□□□□ 0.64
SF3B2-202ENST00000524475 INTS3Q68E01 1043 aaKnown RBP19.07■□□□□ 0.64
SF3B2-202ENST00000524475 ZNF219Q9P2Y4 722 aaPredicted RBP19.07■□□□□ 0.64
SF3B2-202ENST00000524475 LTBP1Q14766 1721 aa19.06■□□□□ 0.64
SF3B2-202ENST00000524475 PRELPP51888 382 aa19.06■□□□□ 0.64
SF3B2-202ENST00000524475 FOXO4P98177 505 aa19.06■□□□□ 0.64
SF3B2-202ENST00000524475 C9orf131Q5VYM1 1079 aa19.06■□□□□ 0.64
SF3B2-202ENST00000524475 ZKSCAN2Q63HK3 967 aa19.06■□□□□ 0.64
SF3B2-202ENST00000524475 CDC5LQ99459 802 aaKnown RBP19.06■□□□□ 0.64
SF3B2-202ENST00000524475 RTFDC1Q9BY42 306 aaPredicted RBP19.06■□□□□ 0.64
SF3B2-202ENST00000524475 USP44Q9H0E7 712 aa19.06■□□□□ 0.64
SF3B2-202ENST00000524475 TIAM2Q8IVF5 1701 aa19.05■□□□□ 0.64
SF3B2-202ENST00000524475 NBPF7P0C2Y1 421 aaPredicted RBP19.05■□□□□ 0.64
SF3B2-202ENST00000524475 OLFM4Q6UX06 510 aa19.05■□□□□ 0.64
SF3B2-202ENST00000524475 VPS33BQ9H267 617 aa19.05■□□□□ 0.64
SF3B2-202ENST00000524475 GREM2Q9H772 168 aa19.05■□□□□ 0.64
SF3B2-202ENST00000524475 SEC31BQ9NQW1 1179 aa19.05■□□□□ 0.64
SF3B2-202ENST00000524475 RNF181Q9P0P0 153 aa19.05■□□□□ 0.64
SF3B2-202ENST00000524475 DUOX1Q9NRD9 1551 aa19.03■□□□□ 0.64
SF3B2-202ENST00000524475 RABL6Q3YEC7 729 aaPredicted RBP19.03■□□□□ 0.64
SF3B2-202ENST00000524475 ANKRD18AQ8IVF6 992 aa19.03■□□□□ 0.64
SF3B2-202ENST00000524475 FRAT1Q92837 279 aaPredicted RBP19.03■□□□□ 0.64
SF3B2-202ENST00000524475 KAZALD1Q96I82 304 aa19.03■□□□□ 0.64
SF3B2-202ENST00000524475 SUCLG2Q96I99 432 aa19.03■□□□□ 0.64
SF3B2-202ENST00000524475 HDAC5Q9UQL6 1122 aa19.03■□□□□ 0.64
SF3B2-202ENST00000524475 ITGA6P23229 1130 aa19.02■□□□□ 0.64
SF3B2-202ENST00000524475 FAM161AQ3B820 660 aa19.02■□□□□ 0.64
SF3B2-202ENST00000524475 EPHA10Q5JZY3 1008 aa19.02■□□□□ 0.64
SF3B2-202ENST00000524475 MPNDQ8N594 471 aa19.02■□□□□ 0.64
SF3B2-202ENST00000524475 SUPT20HQ8NEM7 779 aa19.02■□□□□ 0.64
SF3B2-202ENST00000524475 CCDC85AQ96PX6 553 aaPredicted RBP19.02■□□□□ 0.64
SF3B2-202ENST00000524475 BSDC1Q9NW68 430 aaPredicted RBP19.02■□□□□ 0.64
SF3B2-202ENST00000524475 PODXL2Q9NZ53 605 aa19.02■□□□□ 0.64
SF3B2-202ENST00000524475 LMBR1LQ6UX01 489 aa19.01■□□□□ 0.63
SF3B2-202ENST00000524475 DPP8Q6V1X1 898 aaPredicted RBP19.01■□□□□ 0.63
SF3B2-202ENST00000524475 RCAN3Q9UKA8 241 aa19.01■□□□□ 0.63
SF3B2-202ENST00000524475 SPEF2Q9C093 1822 aa19■□□□□ 0.63
SF3B2-202ENST00000524475 ANKRD18BA2A2Z9 1011 aa19■□□□□ 0.63
SF3B2-202ENST00000524475 IGHMBP2P38935 993 aaKnown RBP19■□□□□ 0.63
SF3B2-202ENST00000524475 IARSP41252 1262 aaKnown RBP19■□□□□ 0.63
SF3B2-202ENST00000524475 IFIT5Q13325 482 aaKnown RBP19■□□□□ 0.63
SF3B2-202ENST00000524475 SLC51AQ86UW1 340 aa19■□□□□ 0.63
SF3B2-202ENST00000524475 UBTFL1P0CB47 393 aaPredicted RBP18.99■□□□□ 0.63
SF3B2-202ENST00000524475 ZNF784Q8NCA9 323 aaPredicted RBP18.99■□□□□ 0.63
SF3B2-202ENST00000524475 BICC1Q9H694 974 aaKnown RBP18.99■□□□□ 0.63
SF3B2-202ENST00000524475 ZNF277Q9NRM2 450 aaPredicted RBP18.99■□□□□ 0.63
SF3B2-202ENST00000524475 GNAI3P08754 354 aa18.98■□□□□ 0.63
SF3B2-202ENST00000524475 MS4A1P11836 297 aa18.98■□□□□ 0.63
SF3B2-202ENST00000524475 DZIP1LQ8IYY4 767 aaKnown RBP18.98■□□□□ 0.63
SF3B2-202ENST00000524475 ANKRD44Q8N8A2 993 aa18.98■□□□□ 0.63
SF3B2-202ENST00000524475 CCDC57Q2TAC2 916 aa18.97■□□□□ 0.63
SF3B2-202ENST00000524475 FTSJ3Q8IY81 847 aaKnown RBP18.97■□□□□ 0.63
SF3B2-202ENST00000524475 MPHOSPH8Q99549 860 aa18.97■□□□□ 0.63
SF3B2-202ENST00000524475 TNNQ9UQP3 1299 aa18.97■□□□□ 0.63
SF3B2-202ENST00000524475 XDHP47989 1333 aa18.97■□□□□ 0.63
SF3B2-202ENST00000524475 GPSM2P81274 684 aa18.96■□□□□ 0.63
SF3B2-202ENST00000524475 KIAA2012Q0VF49 1180 aa18.96■□□□□ 0.63
SF3B2-202ENST00000524475 TMEM57Q8N5G2 664 aa18.96■□□□□ 0.63
SF3B2-202ENST00000524475 CLUAP1Q96AJ1 413 aa18.96■□□□□ 0.63
SF3B2-202ENST00000524475 MEIS3Q99687 375 aa18.96■□□□□ 0.63
SF3B2-202ENST00000524475 MINPP1Q9UNW1 487 aa18.96■□□□□ 0.63
SF3B2-202ENST00000524475 NSFL1CQ9UNZ2 370 aaKnown RBP18.96■□□□□ 0.63
SF3B2-202ENST00000524475 CHMP3Q9Y3E7 222 aa18.96■□□□□ 0.63
SF3B2-202ENST00000524475 A0A1B0GUL6 1792 aa18.96■□□□□ 0.63
SF3B2-202ENST00000524475 COL4A5P29400 1685 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms