RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 HDAC9Q9UKV0 1011 aa23.43■■□□□ 1.34
PVT1-220ENST00000524165 NTSR2O95665 410 aa23.42■■□□□ 1.34
PVT1-220ENST00000524165 GPTP24298 496 aa23.42■■□□□ 1.34
PVT1-220ENST00000524165 SAMD7Q7Z3H4 446 aa23.42■■□□□ 1.34
PVT1-220ENST00000524165 SP8Q8IXZ3 490 aa23.42■■□□□ 1.34
PVT1-220ENST00000524165 DCPSQ96C86 337 aaKnown RBP23.42■■□□□ 1.34
PVT1-220ENST00000524165 ABCC4O15439 1325 aa23.41■■□□□ 1.34
PVT1-220ENST00000524165 YDJCA8MPS7 323 aa23.41■■□□□ 1.34
PVT1-220ENST00000524165 BBOX1O75936 387 aa23.41■■□□□ 1.34
PVT1-220ENST00000524165 HSPA5P11021 654 aaKnown RBP23.41■■□□□ 1.34
PVT1-220ENST00000524165 KIF6Q6ZMV9 814 aa23.41■■□□□ 1.34
PVT1-220ENST00000524165 ZNF34Q8IZ26 560 aa23.41■■□□□ 1.34
PVT1-220ENST00000524165 PHACTR3Q96KR7 559 aa23.41■■□□□ 1.34
PVT1-220ENST00000524165 ANKRD36CQ5JPF3 1778 aa23.4■■□□□ 1.34
PVT1-220ENST00000524165 ADM5C9JUS6 153 aa23.4■■□□□ 1.34
PVT1-220ENST00000524165 TBC1D10BQ4KMP7 808 aaPredicted RBP23.39■■□□□ 1.33
PVT1-220ENST00000524165 FBXO46Q6PJ61 603 aaPredicted RBP23.39■■□□□ 1.33
PVT1-220ENST00000524165 PPP1R42Q7Z4L9 355 aa23.39■■□□□ 1.33
PVT1-220ENST00000524165 NGEFQ8N5V2 710 aa23.39■■□□□ 1.33
PVT1-220ENST00000524165 ZNF296Q8WUU4 475 aaPredicted RBP23.39■■□□□ 1.33
PVT1-220ENST00000524165 RTF1Q92541 710 aaKnown RBP23.39■■□□□ 1.33
PVT1-220ENST00000524165 ZBTB12Q9Y330 459 aaPredicted RBP23.39■■□□□ 1.33
PVT1-220ENST00000524165 MKI67P46013 3256 aaKnown RBP23.39■■□□□ 1.33
PVT1-220ENST00000524165 LAMB2P55268 1798 aa23.39■■□□□ 1.33
PVT1-220ENST00000524165 SLC10A5Q5PT55 438 aa23.38■■□□□ 1.33
PVT1-220ENST00000524165 TTLL7Q6ZT98 887 aa23.38■■□□□ 1.33
PVT1-220ENST00000524165 RASAL3Q86YV0 1011 aa23.38■■□□□ 1.33
PVT1-220ENST00000524165 NOM1Q5C9Z4 860 aaKnown RBP23.37■■□□□ 1.33
PVT1-220ENST00000524165 MCM10Q7L590 875 aa23.37■■□□□ 1.33
PVT1-220ENST00000524165 EGFRP00533 1210 aa23.36■■□□□ 1.33
PVT1-220ENST00000524165 RPS12P25398 132 aaKnown RBP23.36■■□□□ 1.33
PVT1-220ENST00000524165 PRKAR2BP31323 418 aa23.36■■□□□ 1.33
PVT1-220ENST00000524165 FXR1P51114 621 aaKnown RBP eCLIP23.36■■□□□ 1.33
PVT1-220ENST00000524165 PARP10Q53GL7 1025 aa23.36■■□□□ 1.33
PVT1-220ENST00000524165 DUOX1Q9NRD9 1551 aa23.35■■□□□ 1.33
PVT1-220ENST00000524165 PSMD14O00487 310 aa23.35■■□□□ 1.33
PVT1-220ENST00000524165 GIGYF2Q6Y7W6 1299 aaKnown RBP23.35■■□□□ 1.33
PVT1-220ENST00000524165 SULF1Q8IWU6 871 aa23.35■■□□□ 1.33
PVT1-220ENST00000524165 RSPH6AQ9H0K4 717 aa23.35■■□□□ 1.33
PVT1-220ENST00000524165 ZBTB3Q9H5J0 574 aa23.35■■□□□ 1.33
PVT1-220ENST00000524165 LRRC37AA6NMS7 1700 aa23.34■■□□□ 1.33
PVT1-220ENST00000524165 FKBP1BP68106 108 aa23.34■■□□□ 1.33
PVT1-220ENST00000524165 PAPPA2Q9BXP8 1791 aa23.34■■□□□ 1.33
PVT1-220ENST00000524165 TBC1D8O95759 1140 aa23.33■■□□□ 1.33
PVT1-220ENST00000524165 CDCA5Q96FF9 252 aa23.33■■□□□ 1.33
PVT1-220ENST00000524165 DDX60Q8IY21 1712 aaKnown RBP23.33■■□□□ 1.32
PVT1-220ENST00000524165 HTATSF1O43719 755 aaKnown RBP23.32■■□□□ 1.32
PVT1-220ENST00000524165 TAF7Q15545 349 aaPredicted RBP23.32■■□□□ 1.32
PVT1-220ENST00000524165 RRP7AQ9Y3A4 280 aaKnown RBP23.32■■□□□ 1.32
PVT1-220ENST00000524165 TAF1P21675 1872 aa23.31■■□□□ 1.32
PVT1-220ENST00000524165 GPR25O00155 361 aa23.31■■□□□ 1.32
PVT1-220ENST00000524165 CC2D1BQ5T0F9 858 aaKnown RBP23.31■■□□□ 1.32
PVT1-220ENST00000524165 RBM26Q5T8P6 1007 aaKnown RBP23.31■■□□□ 1.32
PVT1-220ENST00000524165 UTP14AQ9BVJ6 771 aaKnown RBP23.31■■□□□ 1.32
PVT1-220ENST00000524165 GGA3Q9NZ52 723 aa23.31■■□□□ 1.32
PVT1-220ENST00000524165 RBBP6Q7Z6E9 1792 aaKnown RBP23.31■■□□□ 1.32
PVT1-220ENST00000524165 KDM3BQ7LBC6 1761 aa23.3■■□□□ 1.32
PVT1-220ENST00000524165 PER1O15534 1290 aaPredicted RBP23.3■■□□□ 1.32
PVT1-220ENST00000524165 KIF4BQ2VIQ3 1234 aa23.3■■□□□ 1.32
PVT1-220ENST00000524165 TMC4Q7Z404 712 aa23.3■■□□□ 1.32
PVT1-220ENST00000524165 MYL6BP14649 208 aa23.29■■□□□ 1.32
PVT1-220ENST00000524165 GRAPQ13588 217 aa23.29■■□□□ 1.32
PVT1-220ENST00000524165 WASHC4Q2M389 1173 aa23.29■■□□□ 1.32
PVT1-220ENST00000524165 DDX46Q7L014 1031 aaKnown RBP23.29■■□□□ 1.32
PVT1-220ENST00000524165 GRAPLQ8TC17 118 aaPredicted RBP23.29■■□□□ 1.32
PVT1-220ENST00000524165 TM4SF4P48230 202 aa23.28■■□□□ 1.32
PVT1-220ENST00000524165 DCTN1Q14203 1278 aa23.28■■□□□ 1.32
PVT1-220ENST00000524165 DBNDD1Q9H9R9 158 aa23.27■■□□□ 1.32
PVT1-220ENST00000524165 HTTP42858 3142 aa23.27■■□□□ 1.32
PVT1-220ENST00000524165 KIAA0100Q14667 2235 aaKnown RBP23.27■■□□□ 1.31
PVT1-220ENST00000524165 INTS3Q68E01 1043 aaKnown RBP23.26■■□□□ 1.31
PVT1-220ENST00000524165 CFHR5Q9BXR6 569 aa23.26■■□□□ 1.31
PVT1-220ENST00000524165 MIS18AQ9NYP9 233 aa23.26■■□□□ 1.31
PVT1-220ENST00000524165 FKTNO75072 461 aa23.25■■□□□ 1.31
PVT1-220ENST00000524165 RTL9Q8NET4 1388 aa23.25■■□□□ 1.31
PVT1-220ENST00000524165 SCN9AQ15858 1988 aa23.24■■□□□ 1.31
PVT1-220ENST00000524165 PNISRQ8TF01 805 aaKnown RBP23.24■■□□□ 1.31
PVT1-220ENST00000524165 ASTN2O75129 1339 aaPredicted RBP23.24■■□□□ 1.31
PVT1-220ENST00000524165 ERBB4Q15303 1308 aa23.24■■□□□ 1.31
PVT1-220ENST00000524165 ECE2O60344 883 aa23.23■■□□□ 1.31
PVT1-220ENST00000524165 POTEFA5A3E0 1075 aa23.22■■□□□ 1.31
PVT1-220ENST00000524165 HCLS1P14317 486 aaPredicted RBP23.22■■□□□ 1.31
PVT1-220ENST00000524165 ANGEL2Q5VTE6 544 aaKnown RBP23.22■■□□□ 1.31
PVT1-220ENST00000524165 KCNQ5Q9NR82 932 aa23.22■■□□□ 1.31
PVT1-220ENST00000524165 CENPFP49454 3210 aa23.22■■□□□ 1.31
PVT1-220ENST00000524165 VIL1P09327 827 aaKnown RBP23.21■■□□□ 1.31
PVT1-220ENST00000524165 EIF4A1P60842 406 aaKnown RBP23.21■■□□□ 1.31
PVT1-220ENST00000524165 NSFL1CQ9UNZ2 370 aaKnown RBP23.21■■□□□ 1.31
PVT1-220ENST00000524165 ZNF609O15014 1411 aa23.2■■□□□ 1.3
PVT1-220ENST00000524165 PITPNM2Q9BZ72 1349 aa23.2■■□□□ 1.3
PVT1-220ENST00000524165 RIMBP2O15034 1052 aa23.2■■□□□ 1.3
PVT1-220ENST00000524165 SREBF2Q12772 1141 aa23.2■■□□□ 1.3
PVT1-220ENST00000524165 SCARF1Q14162 830 aa23.2■■□□□ 1.3
PVT1-220ENST00000524165 CFAP53Q96M91 514 aa23.2■■□□□ 1.3
PVT1-220ENST00000524165 EYA3Q99504 573 aa23.2■■□□□ 1.3
PVT1-220ENST00000524165 NUDCQ9Y266 331 aa23.2■■□□□ 1.3
PVT1-220ENST00000524165 ZNF280AP59817 542 aaPredicted RBP23.19■■□□□ 1.3
PVT1-220ENST00000524165 POLLQ9UGP5 575 aa23.19■■□□□ 1.3
PVT1-220ENST00000524165 DLG5Q8TDM6 1919 aa23.19■■□□□ 1.3
PVT1-220ENST00000524165 PSME4Q14997 1843 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms