RNA–Protein interactions for RNA: ENST00000524074.1

PFDN1-207, Transcript of prefoldin subunit 1, humanhuman

TSL 5 BASIC

Gene PFDN1, Length 395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-207ENST00000524074 HSH2DQ96JZ2 352 aa12.52□□□□□ -0.41
PFDN1-207ENST00000524074 SPACA7Q96KW9 195 aa12.52□□□□□ -0.41
PFDN1-207ENST00000524074 NOC4LQ9BVI4 516 aaKnown RBP12.52□□□□□ -0.41
PFDN1-207ENST00000524074 ZIC2O95409 532 aaPredicted RBP12.51□□□□□ -0.41
PFDN1-207ENST00000524074 GSTT1P30711 240 aa12.51□□□□□ -0.41
PFDN1-207ENST00000524074 GPC1P35052 558 aa12.51□□□□□ -0.41
PFDN1-207ENST00000524074 TCEAL1Q15170 157 aa12.51□□□□□ -0.41
PFDN1-207ENST00000524074 TRIP4Q15650 581 aaPredicted RBP12.51□□□□□ -0.41
PFDN1-207ENST00000524074 BICDL1Q6ZP65 573 aa12.51□□□□□ -0.41
PFDN1-207ENST00000524074 INPP5BP32019 993 aa12.5□□□□□ -0.41
PFDN1-207ENST00000524074 PWP1Q13610 501 aa12.5□□□□□ -0.41
PFDN1-207ENST00000524074 GALNT12Q8IXK2 581 aa12.5□□□□□ -0.41
PFDN1-207ENST00000524074 C7orf43Q8WVR3 580 aa12.5□□□□□ -0.41
PFDN1-207ENST00000524074 GRIP2Q9C0E4 1043 aa12.5□□□□□ -0.41
PFDN1-207ENST00000524074 TMEM63CQ9P1W3 806 aa12.5□□□□□ -0.41
PFDN1-207ENST00000524074 MRPL42Q9Y6G3 142 aaKnown RBP12.5□□□□□ -0.41
PFDN1-207ENST00000524074 NFX1Q12986 1120 aaKnown RBP12.49□□□□□ -0.41
PFDN1-207ENST00000524074 SUV39H2Q9H5I1 410 aa12.49□□□□□ -0.41
PFDN1-207ENST00000524074 CWC22Q9HCG8 908 aaKnown RBP12.49□□□□□ -0.41
PFDN1-207ENST00000524074 PPP4R2Q9NY27 417 aa12.49□□□□□ -0.41
PFDN1-207ENST00000524074 XRCC5P13010 732 aaKnown RBP12.48□□□□□ -0.41
PFDN1-207ENST00000524074 HSD3B2P26439 372 aa12.48□□□□□ -0.41
PFDN1-207ENST00000524074 RELL1Q8IUW5 271 aa12.48□□□□□ -0.41
PFDN1-207ENST00000524074 RSRP1Q9BUV0 290 aa12.48□□□□□ -0.41
PFDN1-207ENST00000524074 KCNMB2Q9Y691 235 aa12.48□□□□□ -0.41
PFDN1-207ENST00000524074 EPB42P16452 691 aa12.47□□□□□ -0.41
PFDN1-207ENST00000524074 NASPP49321 788 aaPredicted RBP12.47□□□□□ -0.41
PFDN1-207ENST00000524074 GRM2Q14416 872 aa12.47□□□□□ -0.41
PFDN1-207ENST00000524074 PTPROQ16827 1216 aa12.47□□□□□ -0.41
PFDN1-207ENST00000524074 BTLAQ7Z6A9 289 aa12.47□□□□□ -0.41
PFDN1-207ENST00000524074 ZFAND3Q9H8U3 227 aa12.47□□□□□ -0.41
PFDN1-207ENST00000524074 POTECB2RU33 542 aa12.46□□□□□ -0.41
PFDN1-207ENST00000524074 WDR4P57081 412 aaKnown RBP12.46□□□□□ -0.41
PFDN1-207ENST00000524074 SERINC3Q13530 473 aa12.46□□□□□ -0.41
PFDN1-207ENST00000524074 MKL1Q969V6 931 aa12.46□□□□□ -0.41
PFDN1-207ENST00000524074 KLRG1Q96E93 195 aa12.46□□□□□ -0.41
PFDN1-207ENST00000524074 ZNF408Q9H9D4 720 aa12.46□□□□□ -0.41
PFDN1-207ENST00000524074 hCG_2014768A0A024R1R8 64 aa12.45□□□□□ -0.42
PFDN1-207ENST00000524074 EREGO14944 169 aa12.45□□□□□ -0.42
PFDN1-207ENST00000524074 IBSPP21815 317 aaPredicted RBP12.45□□□□□ -0.42
PFDN1-207ENST00000524074 PHKA2P46019 1235 aa12.45□□□□□ -0.42
PFDN1-207ENST00000524074 CCDC85BQ15834 202 aaPredicted RBP12.45□□□□□ -0.42
PFDN1-207ENST00000524074 PMEPA1Q969W9 287 aa12.45□□□□□ -0.42
PFDN1-207ENST00000524074 ADAMTS1Q9UHI8 967 aa12.45□□□□□ -0.42
PFDN1-207ENST00000524074 TRAK1Q9UPV9 953 aa12.45□□□□□ -0.42
PFDN1-207ENST00000524074 IGBP1P78318 339 aa12.44□□□□□ -0.42
PFDN1-207ENST00000524074 RNF187Q5TA31 235 aaPredicted RBP12.44□□□□□ -0.42
PFDN1-207ENST00000524074 C1orf127Q8N9H9 656 aa12.44□□□□□ -0.42
PFDN1-207ENST00000524074 GPATCH3Q96I76 525 aa12.44□□□□□ -0.42
PFDN1-207ENST00000524074 TRIM55Q9BYV6 548 aa12.44□□□□□ -0.42
PFDN1-207ENST00000524074 CHRDQ9H2X0 955 aa12.44□□□□□ -0.42
PFDN1-207ENST00000524074 STRIP2Q9ULQ0 834 aa12.44□□□□□ -0.42
PFDN1-207ENST00000524074 EFR3BQ9Y2G0 817 aa12.44□□□□□ -0.42
PFDN1-207ENST00000524074 MINDY4BA8MYZ0 360 aa12.43□□□□□ -0.42
PFDN1-207ENST00000524074 U2SURPO15042 1029 aaKnown RBP12.43□□□□□ -0.42
PFDN1-207ENST00000524074 GBP2P32456 591 aaPredicted RBP12.43□□□□□ -0.42
PFDN1-207ENST00000524074 RNF144AP50876 292 aaPredicted RBP12.43□□□□□ -0.42
PFDN1-207ENST00000524074 KLF16Q9BXK1 252 aaPredicted RBP12.43□□□□□ -0.42
PFDN1-207ENST00000524074 ABI2Q9NYB9 513 aaPredicted RBP12.43□□□□□ -0.42
PFDN1-207ENST00000524074 SIRPGQ9P1W8 387 aa12.43□□□□□ -0.42
PFDN1-207ENST00000524074 XYLBO75191 536 aa12.42□□□□□ -0.42
PFDN1-207ENST00000524074 EIF4A3P38919 411 aaKnown RBP12.42□□□□□ -0.42
PFDN1-207ENST00000524074 KCNB2Q92953 911 aa12.42□□□□□ -0.42
PFDN1-207ENST00000524074 SRPK1Q96SB4 655 aaKnown RBP12.42□□□□□ -0.42
PFDN1-207ENST00000524074 EHD4Q9H223 541 aa12.42□□□□□ -0.42
PFDN1-207ENST00000524074 F6X3S4 739 aa12.41□□□□□ -0.42
PFDN1-207ENST00000524074 SLC19A1P41440 591 aa12.41□□□□□ -0.42
PFDN1-207ENST00000524074 ARSJQ5FYB0 599 aaPredicted RBP12.41□□□□□ -0.42
PFDN1-207ENST00000524074 LRRC69Q6ZNQ3 347 aa12.41□□□□□ -0.42
PFDN1-207ENST00000524074 ANKS3Q6ZW76 656 aa12.41□□□□□ -0.42
PFDN1-207ENST00000524074 EMID1Q96A84 441 aaPredicted RBP12.41□□□□□ -0.42
PFDN1-207ENST00000524074 TMEM74Q96NL1 305 aa12.41□□□□□ -0.42
PFDN1-207ENST00000524074 CNTN3Q9P232 1028 aa12.41□□□□□ -0.42
PFDN1-207ENST00000524074 MRVI1Q9Y6F6 885 aa12.41□□□□□ -0.42
PFDN1-207ENST00000524074 SPATA31C2B4DYI2 1134 aa12.4□□□□□ -0.42
PFDN1-207ENST00000524074 RLBP1P12271 317 aa12.4□□□□□ -0.42
PFDN1-207ENST00000524074 CES1P23141 567 aa12.4□□□□□ -0.42
PFDN1-207ENST00000524074 TTC39BQ5VTQ0 682 aaPredicted RBP12.4□□□□□ -0.42
PFDN1-207ENST00000524074 KIAA0319Q5VV43 1072 aa12.4□□□□□ -0.42
PFDN1-207ENST00000524074 ZCRB1Q8TBF4 217 aaKnown RBP12.4□□□□□ -0.42
PFDN1-207ENST00000524074 RAB11FIP3O75154 756 aa12.39□□□□□ -0.43
PFDN1-207ENST00000524074 TIMP2P16035 220 aa12.39□□□□□ -0.43
PFDN1-207ENST00000524074 ATP4AP20648 1035 aa12.39□□□□□ -0.43
PFDN1-207ENST00000524074 MEIOBQ8N635 442 aa12.39□□□□□ -0.43
PFDN1-207ENST00000524074 C3orf58Q8NDZ4 430 aa12.39□□□□□ -0.43
PFDN1-207ENST00000524074 CPLX3Q8WVH0 158 aa12.39□□□□□ -0.43
PFDN1-207ENST00000524074 INSM2Q96T92 566 aaPredicted RBP12.39□□□□□ -0.43
PFDN1-207ENST00000524074 POLMQ9NP87 494 aaPredicted RBP12.39□□□□□ -0.43
PFDN1-207ENST00000524074 GINM1Q9NU53 330 aa12.39□□□□□ -0.43
PFDN1-207ENST00000524074 PPM1HQ9ULR3 514 aa12.39□□□□□ -0.43
PFDN1-207ENST00000524074 R3HCC1Q9Y3T6 440 aaKnown RBP12.39□□□□□ -0.43
PFDN1-207ENST00000524074 ENPP3O14638 875 aa12.38□□□□□ -0.43
PFDN1-207ENST00000524074 ETFBP38117 255 aa12.38□□□□□ -0.43
PFDN1-207ENST00000524074 FCGRTP55899 365 aa12.38□□□□□ -0.43
PFDN1-207ENST00000524074 ANAPC15P60006 121 aa12.38□□□□□ -0.43
PFDN1-207ENST00000524074 COL9A2Q14055 689 aaPredicted RBP12.38□□□□□ -0.43
PFDN1-207ENST00000524074 NLRP13Q86W25 1043 aa12.38□□□□□ -0.43
PFDN1-207ENST00000524074 GLIS3Q8NEA6 775 aa12.38□□□□□ -0.43
PFDN1-207ENST00000524074 MICAL1Q8TDZ2 1067 aa12.38□□□□□ -0.43
PFDN1-207ENST00000524074 ZNF296Q8WUU4 475 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms