RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	BCOR	Q6W2J9	1755 aa		13	□□□□□ -0.33
SPIDR-222	ENST00000524006	ZBTB7A	O95365	584 aa		13	□□□□□ -0.33
SPIDR-222	ENST00000524006	PTGER2	P43116	358 aa		13	□□□□□ -0.33
SPIDR-222	ENST00000524006	NEK4	P51957	841 aa		13	□□□□□ -0.33
SPIDR-222	ENST00000524006	NUCB2	P80303	420 aa		13	□□□□□ -0.33
SPIDR-222	ENST00000524006	TXNRD1	Q16881	649 aa		13	□□□□□ -0.33
SPIDR-222	ENST00000524006	CWC27	Q6UX04	472 aa	Known RBP	13	□□□□□ -0.33
SPIDR-222	ENST00000524006	TTLL7	Q6ZT98	887 aa		13	□□□□□ -0.33
SPIDR-222	ENST00000524006	LRP10	Q7Z4F1	713 aa		13	□□□□□ -0.33
SPIDR-222	ENST00000524006	DNAJC10	Q8IXB1	793 aa		13	□□□□□ -0.33
SPIDR-222	ENST00000524006	COL5A3	P25940	1745 aa	Predicted RBP	12.99	□□□□□ -0.33
SPIDR-222	ENST00000524006	SGSM2	O43147	1006 aa		12.99	□□□□□ -0.33
SPIDR-222	ENST00000524006	MCM4	P33991	863 aa		12.99	□□□□□ -0.33
SPIDR-222	ENST00000524006	RABL6	Q3YEC7	729 aa	Predicted RBP	12.99	□□□□□ -0.33
SPIDR-222	ENST00000524006	LMBR1L	Q6UX01	489 aa		12.99	□□□□□ -0.33
SPIDR-222	ENST00000524006	PIGB	Q92521	554 aa		12.99	□□□□□ -0.33
SPIDR-222	ENST00000524006	JARID2	Q92833	1246 aa	Predicted RBP	12.99	□□□□□ -0.33
SPIDR-222	ENST00000524006	KAZALD1	Q96I82	304 aa		12.99	□□□□□ -0.33
SPIDR-222	ENST00000524006	CCDC8	Q9H0W5	538 aa	Predicted RBP	12.99	□□□□□ -0.33
SPIDR-222	ENST00000524006	CWC22	Q9HCG8	908 aa	Known RBP	12.99	□□□□□ -0.33
SPIDR-222	ENST00000524006	RFX7	Q2KHR2	1363 aa		12.98	□□□□□ -0.33
SPIDR-222	ENST00000524006	SASH1	O94885	1247 aa		12.98	□□□□□ -0.33
SPIDR-222	ENST00000524006	TNNI3K	Q59H18	835 aa		12.98	□□□□□ -0.33
SPIDR-222	ENST00000524006	EPHA10	Q5JZY3	1008 aa		12.98	□□□□□ -0.33
SPIDR-222	ENST00000524006	ATG3	Q9NT62	314 aa		12.98	□□□□□ -0.33
SPIDR-222	ENST00000524006	ASAP1	Q9ULH1	1129 aa		12.98	□□□□□ -0.33
SPIDR-222	ENST00000524006	FPGT-TNNI3K	V9GXZ4	949 aa		12.98	□□□□□ -0.33
SPIDR-222	ENST00000524006	DDX60	Q8IY21	1712 aa	Known RBP	12.98	□□□□□ -0.33
SPIDR-222	ENST00000524006	ARAP2	Q8WZ64	1704 aa		12.98	□□□□□ -0.33
SPIDR-222	ENST00000524006	ZNF609	O15014	1411 aa		12.97	□□□□□ -0.33
SPIDR-222	ENST00000524006	LAMA4	Q16363	1823 aa		12.97	□□□□□ -0.33
SPIDR-222	ENST00000524006	MAP3K15	Q6ZN16	1313 aa		12.97	□□□□□ -0.33
SPIDR-222	ENST00000524006	ZNF831	Q5JPB2	1677 aa		12.97	□□□□□ -0.33
SPIDR-222	ENST00000524006		H7C1W4	665 aa		12.97	□□□□□ -0.33
SPIDR-222	ENST00000524006	CD2BP2	O95400	341 aa	Known RBP	12.97	□□□□□ -0.33
SPIDR-222	ENST00000524006	ZKSCAN1	P17029	563 aa	Predicted RBP	12.97	□□□□□ -0.33
SPIDR-222	ENST00000524006	TFCP2	Q12800	502 aa		12.97	□□□□□ -0.33
SPIDR-222	ENST00000524006	TCIRG1	Q13488	830 aa		12.97	□□□□□ -0.33
SPIDR-222	ENST00000524006	SLC15A2	Q16348	729 aa		12.97	□□□□□ -0.33
SPIDR-222	ENST00000524006	CCDC57	Q2TAC2	916 aa		12.97	□□□□□ -0.33
SPIDR-222	ENST00000524006	RNF20	Q5VTR2	975 aa		12.97	□□□□□ -0.33
SPIDR-222	ENST00000524006	KLHDC4	Q8TBB5	520 aa		12.97	□□□□□ -0.33
SPIDR-222	ENST00000524006	EAF2	Q96CJ1	260 aa	Predicted RBP	12.97	□□□□□ -0.33
SPIDR-222	ENST00000524006	STK32B	Q9NY57	414 aa		12.97	□□□□□ -0.33
SPIDR-222	ENST00000524006	ATF5	Q9Y2D1	282 aa	Predicted RBP	12.97	□□□□□ -0.33
SPIDR-222	ENST00000524006	HSPA4	P34932	840 aa		12.96	□□□□□ -0.33
SPIDR-222	ENST00000524006	IL15	P40933	162 aa	Predicted RBP	12.96	□□□□□ -0.33
SPIDR-222	ENST00000524006	RAB3GAP1	Q15042	981 aa		12.96	□□□□□ -0.33
SPIDR-222	ENST00000524006	ACSBG1	Q96GR2	724 aa		12.96	□□□□□ -0.33
SPIDR-222	ENST00000524006	BOLA2	Q9H3K6	86 aa		12.96	□□□□□ -0.33
SPIDR-222	ENST00000524006	CHD4	Q14839	1912 aa		12.96	□□□□□ -0.34
SPIDR-222	ENST00000524006	PTPN12	Q05209	780 aa	Known RBP	12.95	□□□□□ -0.34
SPIDR-222	ENST00000524006	LRRFIP1	Q32MZ4	808 aa	Known RBP	12.95	□□□□□ -0.34
SPIDR-222	ENST00000524006	GORAB	Q5T7V8	394 aa		12.95	□□□□□ -0.34
SPIDR-222	ENST00000524006	NOL8	Q76FK4	1167 aa	Known RBP	12.95	□□□□□ -0.34
SPIDR-222	ENST00000524006	DNAJC2	Q99543	621 aa	Known RBP	12.95	□□□□□ -0.34
SPIDR-222	ENST00000524006	SGIP1	Q9BQI5	828 aa		12.95	□□□□□ -0.34
SPIDR-222	ENST00000524006	MYH13	Q9UKX3	1938 aa		12.95	□□□□□ -0.34
SPIDR-222	ENST00000524006	CCDC171	Q6TFL3	1326 aa		12.94	□□□□□ -0.34
SPIDR-222	ENST00000524006	CIAO1	O76071	339 aa		12.94	□□□□□ -0.34
SPIDR-222	ENST00000524006	PCCA	P05165	728 aa	Predicted RBP	12.94	□□□□□ -0.34
SPIDR-222	ENST00000524006	ATP5J	P18859	108 aa		12.94	□□□□□ -0.34
SPIDR-222	ENST00000524006	RFX5	P48382	616 aa	Predicted RBP	12.94	□□□□□ -0.34
SPIDR-222	ENST00000524006	CASP7	P55210	303 aa		12.94	□□□□□ -0.34
SPIDR-222	ENST00000524006	NMI	Q13287	307 aa	Predicted RBP	12.94	□□□□□ -0.34
SPIDR-222	ENST00000524006	SKOR2	Q2VWA4	1001 aa	Predicted RBP	12.94	□□□□□ -0.34
SPIDR-222	ENST00000524006	TNPO1	Q92973	898 aa	Known RBP	12.94	□□□□□ -0.34
SPIDR-222	ENST00000524006	NEUROD6	Q96NK8	337 aa		12.94	□□□□□ -0.34
SPIDR-222	ENST00000524006	ISCA1	Q9BUE6	129 aa		12.94	□□□□□ -0.34
SPIDR-222	ENST00000524006	TLR7	Q9NYK1	1049 aa	Known RBP	12.94	□□□□□ -0.34
SPIDR-222	ENST00000524006	AKAP2	Q9Y2D5	859 aa		12.94	□□□□□ -0.34
SPIDR-222	ENST00000524006	BTAF1	O14981	1849 aa		12.94	□□□□□ -0.34
SPIDR-222	ENST00000524006	EYA2	O00167	538 aa		12.93	□□□□□ -0.34
SPIDR-222	ENST00000524006	DDIT3	P35638	169 aa		12.93	□□□□□ -0.34
SPIDR-222	ENST00000524006	FOXO4	P98177	505 aa		12.93	□□□□□ -0.34
SPIDR-222	ENST00000524006	IFIT5	Q13325	482 aa	Known RBP	12.93	□□□□□ -0.34
SPIDR-222	ENST00000524006	L1TD1	Q5T7N2	865 aa	Known RBP	12.93	□□□□□ -0.34
SPIDR-222	ENST00000524006	SMARCC1	Q92922	1105 aa	Predicted RBP	12.93	□□□□□ -0.34
SPIDR-222	ENST00000524006	MTFR1L	Q9H019	292 aa		12.93	□□□□□ -0.34
SPIDR-222	ENST00000524006	LSG1	Q9H089	658 aa	Known RBP	12.93	□□□□□ -0.34
SPIDR-222	ENST00000524006	GPR108	Q9NPR9	543 aa		12.93	□□□□□ -0.34
SPIDR-222	ENST00000524006	CEP126	Q9P2H0	1117 aa		12.93	□□□□□ -0.34
SPIDR-222	ENST00000524006	FBXO3	Q9UK99	471 aa		12.93	□□□□□ -0.34
SPIDR-222	ENST00000524006	PALD1	Q9ULE6	856 aa		12.93	□□□□□ -0.34
SPIDR-222	ENST00000524006	SCN7A	Q01118	1682 aa		12.93	□□□□□ -0.34
SPIDR-222	ENST00000524006	NHS	Q6T4R5	1651 aa		12.93	□□□□□ -0.34
SPIDR-222	ENST00000524006	CDHR2	Q9BYE9	1310 aa		12.92	□□□□□ -0.34
SPIDR-222	ENST00000524006	HSP90B1	P14625	803 aa	Known RBP	12.92	□□□□□ -0.34
SPIDR-222	ENST00000524006	PSMA5	P28066	241 aa		12.92	□□□□□ -0.34
SPIDR-222	ENST00000524006	PRIM1	P49642	420 aa	Known RBP	12.92	□□□□□ -0.34
SPIDR-222	ENST00000524006	GIGYF2	Q6Y7W6	1299 aa	Known RBP	12.92	□□□□□ -0.34
SPIDR-222	ENST00000524006	DZIP3	Q86Y13	1208 aa	Known RBP	12.92	□□□□□ -0.34
SPIDR-222	ENST00000524006	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	12.92	□□□□□ -0.34
SPIDR-222	ENST00000524006	SYT17	Q9BSW7	474 aa		12.92	□□□□□ -0.34
SPIDR-222	ENST00000524006	UPF3B	Q9BZI7	483 aa	Known RBP	12.92	□□□□□ -0.34
SPIDR-222	ENST00000524006	FHDC1	Q9C0D6	1143 aa	Predicted RBP	12.92	□□□□□ -0.34
SPIDR-222	ENST00000524006	MYH14	Q7Z406	1995 aa	Known RBP	12.91	□□□□□ -0.34
SPIDR-222	ENST00000524006	CYP19A1	P11511	503 aa	Predicted RBP	12.91	□□□□□ -0.34
SPIDR-222	ENST00000524006	CAST	P20810	708 aa	Known RBP	12.91	□□□□□ -0.34
SPIDR-222	ENST00000524006	GPT	P24298	496 aa		12.91	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms