RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 GLTPD2A6NH11 291 aa20.89■□□□□ 0.93
PABPC1-221ENST00000522720 PDE8AO60658 829 aa20.89■□□□□ 0.93
PABPC1-221ENST00000522720 SP8Q8IXZ3 490 aa20.89■□□□□ 0.93
PABPC1-221ENST00000522720 TIAM2Q8IVF5 1701 aa20.89■□□□□ 0.93
PABPC1-221ENST00000522720 H7C1W4 665 aa20.88■□□□□ 0.93
PABPC1-221ENST00000522720 KIF3CO14782 793 aa20.88■□□□□ 0.93
PABPC1-221ENST00000522720 GCKRQ14397 625 aa20.88■□□□□ 0.93
PABPC1-221ENST00000522720 TMC4Q7Z404 712 aa20.88■□□□□ 0.93
PABPC1-221ENST00000522720 SLC51AQ86UW1 340 aa20.88■□□□□ 0.93
PABPC1-221ENST00000522720 NMRK2Q9NPI5 230 aa20.88■□□□□ 0.93
PABPC1-221ENST00000522720 F6X3S4 739 aa20.87■□□□□ 0.93
PABPC1-221ENST00000522720 IARSP41252 1262 aaKnown RBP20.87■□□□□ 0.93
PABPC1-221ENST00000522720 C1QTNF8P60827 252 aa20.87■□□□□ 0.93
PABPC1-221ENST00000522720 MRPL50Q8N5N7 158 aaKnown RBP20.87■□□□□ 0.93
PABPC1-221ENST00000522720 CCDC152Q4G0S7 254 aa20.86■□□□□ 0.93
PABPC1-221ENST00000522720 DPY19L2Q6NUT2 758 aa20.86■□□□□ 0.93
PABPC1-221ENST00000522720 CELF1Q92879 486 aaKnown RBP20.86■□□□□ 0.93
PABPC1-221ENST00000522720 BEND3Q5T5X7 828 aa20.85■□□□□ 0.93
PABPC1-221ENST00000522720 SSH1Q8WYL5 1049 aa20.85■□□□□ 0.93
PABPC1-221ENST00000522720 CT47B1P0C2W7 299 aaPredicted RBP20.84■□□□□ 0.93
PABPC1-221ENST00000522720 RPS8P62241 208 aaKnown RBP20.84■□□□□ 0.93
PABPC1-221ENST00000522720 UBE3BQ7Z3V4 1068 aa20.84■□□□□ 0.93
PABPC1-221ENST00000522720 RRAGCQ9HB90 399 aa20.84■□□□□ 0.93
PABPC1-221ENST00000522720 MYH3P11055 1940 aa20.83■□□□□ 0.93
PABPC1-221ENST00000522720 CASP7P55210 303 aa20.83■□□□□ 0.93
PABPC1-221ENST00000522720 CTSWP56202 376 aa20.83■□□□□ 0.93
PABPC1-221ENST00000522720 ALDH1L2Q3SY69 923 aa20.83■□□□□ 0.93
PABPC1-221ENST00000522720 MPNDQ8N594 471 aa20.83■□□□□ 0.93
PABPC1-221ENST00000522720 RTFDC1Q9BY42 306 aaPredicted RBP20.83■□□□□ 0.93
PABPC1-221ENST00000522720 SEC31BQ9NQW1 1179 aa20.83■□□□□ 0.93
PABPC1-221ENST00000522720 HNRNPUQ00839 825 aaKnown RBP eCLIP20.82■□□□□ 0.92
PABPC1-221ENST00000522720 DPP8Q6V1X1 898 aaPredicted RBP20.82■□□□□ 0.92
PABPC1-221ENST00000522720 SUPT20HQ8NEM7 779 aa20.82■□□□□ 0.92
PABPC1-221ENST00000522720 TTLL11Q8NHH1 800 aa20.82■□□□□ 0.92
PABPC1-221ENST00000522720 PLA2G12BQ9BX93 195 aa20.82■□□□□ 0.92
PABPC1-221ENST00000522720 VPS33BQ9H267 617 aa20.82■□□□□ 0.92
PABPC1-221ENST00000522720 COL4A1P02462 1669 aa20.81■□□□□ 0.92
PABPC1-221ENST00000522720 JDP2Q8WYK2 163 aa20.81■□□□□ 0.92
PABPC1-221ENST00000522720 CCDC85AQ96PX6 553 aaPredicted RBP20.81■□□□□ 0.92
PABPC1-221ENST00000522720 LRRC37AA6NMS7 1700 aa20.81■□□□□ 0.92
PABPC1-221ENST00000522720 PTPRCP08575 1304 aa20.8■□□□□ 0.92
PABPC1-221ENST00000522720 FZD9O00144 591 aa20.8■□□□□ 0.92
PABPC1-221ENST00000522720 DDNO94850 711 aaPredicted RBP20.8■□□□□ 0.92
PABPC1-221ENST00000522720 VEGFAP15692 232 aaPredicted RBP20.8■□□□□ 0.92
PABPC1-221ENST00000522720 SLC4A10Q6U841 1118 aa20.8■□□□□ 0.92
PABPC1-221ENST00000522720 LARGE2Q8N3Y3 721 aa20.8■□□□□ 0.92
PABPC1-221ENST00000522720 BCL2L13Q9BXK5 485 aa20.8■□□□□ 0.92
PABPC1-221ENST00000522720 ALDH1L1O75891 902 aa20.79■□□□□ 0.92
PABPC1-221ENST00000522720 TOMM70O94826 608 aa20.79■□□□□ 0.92
PABPC1-221ENST00000522720 SRCIN1Q9C0H9 1055 aa20.79■□□□□ 0.92
PABPC1-221ENST00000522720 RTL9Q8NET4 1388 aa20.79■□□□□ 0.92
PABPC1-221ENST00000522720 WDR90Q96KV7 1748 aa20.78■□□□□ 0.92
PABPC1-221ENST00000522720 COL4A5P29400 1685 aa20.78■□□□□ 0.92
PABPC1-221ENST00000522720 POTECB2RU33 542 aa20.78■□□□□ 0.92
PABPC1-221ENST00000522720 PPIP5K2O43314 1243 aa20.78■□□□□ 0.92
PABPC1-221ENST00000522720 ANKRD18AQ8IVF6 992 aa20.78■□□□□ 0.92
PABPC1-221ENST00000522720 C16orf71Q8IYS4 520 aaPredicted RBP20.78■□□□□ 0.92
PABPC1-221ENST00000522720 GREM2Q9H772 168 aa20.78■□□□□ 0.92
PABPC1-221ENST00000522720 SMC4Q9NTJ3 1288 aa20.78■□□□□ 0.92
PABPC1-221ENST00000522720 NSFL1CQ9UNZ2 370 aaKnown RBP20.78■□□□□ 0.92
PABPC1-221ENST00000522720 GRM8O00222 908 aa20.77■□□□□ 0.92
PABPC1-221ENST00000522720 CSF1RP07333 972 aa20.77■□□□□ 0.92
PABPC1-221ENST00000522720 AOC3Q16853 763 aa20.77■□□□□ 0.92
PABPC1-221ENST00000522720 CDC5LQ99459 802 aaKnown RBP20.77■□□□□ 0.92
PABPC1-221ENST00000522720 ZNF541Q9H0D2 1346 aa20.77■□□□□ 0.91
PABPC1-221ENST00000522720 GPSM2P81274 684 aa20.76■□□□□ 0.91
PABPC1-221ENST00000522720 KIAA2012Q0VF49 1180 aa20.76■□□□□ 0.91
PABPC1-221ENST00000522720 BRPF1P55201 1214 aaPredicted RBP20.75■□□□□ 0.91
PABPC1-221ENST00000522720 NIM1KQ8IY84 436 aa20.75■□□□□ 0.91
PABPC1-221ENST00000522720 RBM46Q8TBY0 533 aaKnown RBP20.75■□□□□ 0.91
PABPC1-221ENST00000522720 L3MBTL3Q96JM7 780 aaPredicted RBP20.75■□□□□ 0.91
PABPC1-221ENST00000522720 C9orf78Q9NZ63 289 aaPredicted RBP20.75■□□□□ 0.91
PABPC1-221ENST00000522720 DUOX1Q9NRD9 1551 aa20.75■□□□□ 0.91
PABPC1-221ENST00000522720 RARSP54136 660 aaKnown RBP20.74■□□□□ 0.91
PABPC1-221ENST00000522720 EIF6P56537 245 aaKnown RBP20.74■□□□□ 0.91
PABPC1-221ENST00000522720 FOXO4P98177 505 aa20.74■□□□□ 0.91
PABPC1-221ENST00000522720 GPC2Q8N158 579 aa20.74■□□□□ 0.91
PABPC1-221ENST00000522720 PODXL2Q9NZ53 605 aa20.74■□□□□ 0.91
PABPC1-221ENST00000522720 POLLQ9UGP5 575 aa20.74■□□□□ 0.91
PABPC1-221ENST00000522720 LTBP1Q14766 1721 aa20.73■□□□□ 0.91
PABPC1-221ENST00000522720 C6orf229H3BNL8 230 aa20.73■□□□□ 0.91
PABPC1-221ENST00000522720 ITGA6P23229 1130 aa20.73■□□□□ 0.91
PABPC1-221ENST00000522720 BSDC1Q9NW68 430 aaPredicted RBP20.73■□□□□ 0.91
PABPC1-221ENST00000522720 ZNRF3Q9ULT6 936 aa20.73■□□□□ 0.91
PABPC1-221ENST00000522720 WASHC4Q2M389 1173 aa20.72■□□□□ 0.91
PABPC1-221ENST00000522720 FAM161AQ3B820 660 aa20.72■□□□□ 0.91
PABPC1-221ENST00000522720 TBC1D16Q8TBP0 767 aa20.72■□□□□ 0.91
PABPC1-221ENST00000522720 ANKIB1Q9P2G1 1089 aa20.72■□□□□ 0.91
PABPC1-221ENST00000522720 NOB1Q9ULX3 412 aaKnown RBP20.72■□□□□ 0.91
PABPC1-221ENST00000522720 UTYO14607 1347 aa20.72■□□□□ 0.91
PABPC1-221ENST00000522720 SCN4AP35499 1836 aa20.71■□□□□ 0.91
PABPC1-221ENST00000522720 IQCA1LA6NCM1 817 aa20.71■□□□□ 0.91
PABPC1-221ENST00000522720 EYA3Q99504 573 aa20.71■□□□□ 0.91
PABPC1-221ENST00000522720 ZBED9Q6R2W3 1325 aa20.71■□□□□ 0.91
PABPC1-221ENST00000522720 IGHMBP2P38935 993 aaKnown RBP20.7■□□□□ 0.9
PABPC1-221ENST00000522720 FSTL1Q12841 308 aa20.7■□□□□ 0.9
PABPC1-221ENST00000522720 EPHA10Q5JZY3 1008 aa20.7■□□□□ 0.9
PABPC1-221ENST00000522720 GGA1Q9UJY5 639 aa20.7■□□□□ 0.9
PABPC1-221ENST00000522720 MINPP1Q9UNW1 487 aa20.7■□□□□ 0.9
PABPC1-221ENST00000522720 GJA3Q9Y6H8 435 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms