RNA–Protein interactions for RNA: ENST00000522468.1

HMBOX1-209, Transcript of homeobox containing 1, humanhuman

TSL 3

Gene HMBOX1, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-209ENST00000522468 APAF1O14727 1248 aa18.31■□□□□ 0.52
HMBOX1-209ENST00000522468 CXCL9Q07325 125 aa18.31■□□□□ 0.52
HMBOX1-209ENST00000522468 KIAA2012Q0VF49 1180 aa18.31■□□□□ 0.52
HMBOX1-209ENST00000522468 TRIM28Q13263 835 aaKnown RBP18.31■□□□□ 0.52
HMBOX1-209ENST00000522468 DDX46Q7L014 1031 aaKnown RBP18.31■□□□□ 0.52
HMBOX1-209ENST00000522468 IFT57Q9NWB7 429 aa18.31■□□□□ 0.52
HMBOX1-209ENST00000522468 ZNRF3Q9ULT6 936 aa18.31■□□□□ 0.52
HMBOX1-209ENST00000522468 RASSF10A6NK89 507 aa18.3■□□□□ 0.52
HMBOX1-209ENST00000522468 SF3B3Q15393 1217 aaKnown RBP18.3■□□□□ 0.52
HMBOX1-209ENST00000522468 DPP8Q6V1X1 898 aaPredicted RBP18.3■□□□□ 0.52
HMBOX1-209ENST00000522468 SUPT20HQ8NEM7 779 aa18.3■□□□□ 0.52
HMBOX1-209ENST00000522468 ZNF428Q96B54 188 aa18.3■□□□□ 0.52
HMBOX1-209ENST00000522468 ATP5J2-PTCD1G3V325 749 aa18.29■□□□□ 0.52
HMBOX1-209ENST00000522468 LMOD1P29536 600 aaPredicted RBP18.29■□□□□ 0.52
HMBOX1-209ENST00000522468 VEGFBP49765 207 aa18.29■□□□□ 0.52
HMBOX1-209ENST00000522468 USP50Q70EL3 339 aaPredicted RBP18.29■□□□□ 0.52
HMBOX1-209ENST00000522468 TMC4Q7Z404 712 aa18.29■□□□□ 0.52
HMBOX1-209ENST00000522468 MPNDQ8N594 471 aa18.29■□□□□ 0.52
HMBOX1-209ENST00000522468 FAM89AQ96GI7 184 aa18.29■□□□□ 0.52
HMBOX1-209ENST00000522468 TMX4Q9H1E5 349 aaPredicted RBP18.29■□□□□ 0.52
HMBOX1-209ENST00000522468 GPRC5DQ9NZD1 345 aa18.29■□□□□ 0.52
HMBOX1-209ENST00000522468 THSD7BQ9C0I4 1608 aa18.29■□□□□ 0.52
HMBOX1-209ENST00000522468 GNAI1P63096 354 aa18.27■□□□□ 0.52
HMBOX1-209ENST00000522468 CELF1Q92879 486 aaKnown RBP18.27■□□□□ 0.52
HMBOX1-209ENST00000522468 CDHR2Q9BYE9 1310 aa18.26■□□□□ 0.51
HMBOX1-209ENST00000522468 YDJCA8MPS7 323 aa18.26■□□□□ 0.51
HMBOX1-209ENST00000522468 FMR1Q06787 632 aaKnown RBP eCLIP18.26■□□□□ 0.519e-9■■■□□ 17.2
HMBOX1-209ENST00000522468 TNS4Q8IZW8 715 aa18.26■□□□□ 0.51
HMBOX1-209ENST00000522468 PHAXQ9H814 394 aaKnown RBP18.26■□□□□ 0.51
HMBOX1-209ENST00000522468 ADARB2Q9NS39 739 aaKnown RBP18.26■□□□□ 0.51
HMBOX1-209ENST00000522468 GMPSP49915 693 aaPredicted RBP18.25■□□□□ 0.51
HMBOX1-209ENST00000522468 CALD1Q05682 793 aaKnown RBP18.25■□□□□ 0.51
HMBOX1-209ENST00000522468 C8orf58Q8NAV2 365 aa18.25■□□□□ 0.51
HMBOX1-209ENST00000522468 IRS4O14654 1257 aaPredicted RBP18.24■□□□□ 0.51
HMBOX1-209ENST00000522468 FOXN1O15353 648 aa18.24■□□□□ 0.51
HMBOX1-209ENST00000522468 CIAPIN1Q6FI81 312 aa18.24■□□□□ 0.51
HMBOX1-209ENST00000522468 PGAP2Q9UHJ9 254 aa18.24■□□□□ 0.51
HMBOX1-209ENST00000522468 SCN9AQ15858 1988 aa18.23■□□□□ 0.51
HMBOX1-209ENST00000522468 ELL2O00472 640 aaPredicted RBP18.23■□□□□ 0.51
HMBOX1-209ENST00000522468 RAD17O75943 681 aa18.23■□□□□ 0.51
HMBOX1-209ENST00000522468 DEFB115Q30KQ5 88 aa18.23■□□□□ 0.51
HMBOX1-209ENST00000522468 CCDC184Q52MB2 194 aa18.23■□□□□ 0.51
HMBOX1-209ENST00000522468 CST9Q5W186 159 aa18.23■□□□□ 0.51
HMBOX1-209ENST00000522468 ZBTB38Q8NAP3 1195 aaPredicted RBP18.23■□□□□ 0.51
HMBOX1-209ENST00000522468 WBP1LQ9NX94 342 aa18.23■□□□□ 0.51
HMBOX1-209ENST00000522468 TRAF5O00463 557 aa18.22■□□□□ 0.51
HMBOX1-209ENST00000522468 HIRAP54198 1017 aaPredicted RBP18.22■□□□□ 0.51
HMBOX1-209ENST00000522468 RTL5Q5HYW3 569 aaPredicted RBP18.22■□□□□ 0.51
HMBOX1-209ENST00000522468 RIC3Q7Z5B4 369 aa18.22■□□□□ 0.51
HMBOX1-209ENST00000522468 POLLQ9UGP5 575 aa18.22■□□□□ 0.51
HMBOX1-209ENST00000522468 GPSM2P81274 684 aa18.21■□□□□ 0.51
HMBOX1-209ENST00000522468 GOLGA2Q08379 1002 aa18.21■□□□□ 0.51
HMBOX1-209ENST00000522468 TNIP1Q15025 636 aa18.21■□□□□ 0.51
HMBOX1-209ENST00000522468 WDR33Q9C0J8 1336 aaKnown RBP18.21■□□□□ 0.51
HMBOX1-209ENST00000522468 SHTN1A0MZ66 631 aa18.2■□□□□ 0.5
HMBOX1-209ENST00000522468 RPS8P62241 208 aaKnown RBP18.2■□□□□ 0.5
HMBOX1-209ENST00000522468 WASHC4Q2M389 1173 aa18.2■□□□□ 0.5
HMBOX1-209ENST00000522468 TSPYL6Q8N831 410 aa18.2■□□□□ 0.5
HMBOX1-209ENST00000522468 CCDC191Q8NCU4 936 aa18.2■□□□□ 0.5
HMBOX1-209ENST00000522468 MYD88Q99836 296 aa18.2■□□□□ 0.5
HMBOX1-209ENST00000522468 PRDM10Q9NQV6 1147 aa18.2■□□□□ 0.5
HMBOX1-209ENST00000522468 ABT1Q9ULW3 272 aaKnown RBP18.2■□□□□ 0.5
HMBOX1-209ENST00000522468 NSFL1CQ9UNZ2 370 aaKnown RBP18.2■□□□□ 0.5
HMBOX1-209ENST00000522468 PSME4Q14997 1843 aa18.2■□□□□ 0.5
HMBOX1-209ENST00000522468 MYH3P11055 1940 aa18.19■□□□□ 0.5
HMBOX1-209ENST00000522468 ZNF316A6NFI3 1004 aaPredicted RBP18.19■□□□□ 0.5
HMBOX1-209ENST00000522468 PCCAP05165 728 aaPredicted RBP18.19■□□□□ 0.5
HMBOX1-209ENST00000522468 CCDC27Q2M243 656 aa18.19■□□□□ 0.5
HMBOX1-209ENST00000522468 TRPM4Q8TD43 1214 aa18.19■□□□□ 0.5
HMBOX1-209ENST00000522468 ZC3H15Q8WU90 426 aaKnown RBP18.19■□□□□ 0.5
HMBOX1-209ENST00000522468 METTL22Q9BUU2 404 aaPredicted RBP18.19■□□□□ 0.5
HMBOX1-209ENST00000522468 SEC31BQ9NQW1 1179 aa18.19■□□□□ 0.5
HMBOX1-209ENST00000522468 PODXL2Q9NZ53 605 aa18.19■□□□□ 0.5
HMBOX1-209ENST00000522468 RTL9Q8NET4 1388 aa18.18■□□□□ 0.5
HMBOX1-209ENST00000522468 TBC1D16Q8TBP0 767 aa18.18■□□□□ 0.5
HMBOX1-209ENST00000522468 DPF2Q92785 391 aa18.18■□□□□ 0.5
HMBOX1-209ENST00000522468 CNOT7Q9UIV1 285 aaKnown RBP18.18■□□□□ 0.5
HMBOX1-209ENST00000522468 TLL2Q9Y6L7 1015 aa18.18■□□□□ 0.5
HMBOX1-209ENST00000522468 POLR2AP24928 1970 aaKnown RBP18.18■□□□□ 0.5
HMBOX1-209ENST00000522468 PSMD14O00487 310 aa18.17■□□□□ 0.5
HMBOX1-209ENST00000522468 CTCFP49711 727 aaPredicted RBP18.17■□□□□ 0.5
HMBOX1-209ENST00000522468 CCDC30Q5VVM6 783 aa18.17■□□□□ 0.5
HMBOX1-209ENST00000522468 BCL2L13Q9BXK5 485 aa18.17■□□□□ 0.5
HMBOX1-209ENST00000522468 GLIS2Q9BZE0 524 aaPredicted RBP18.17■□□□□ 0.5
HMBOX1-209ENST00000522468 DBNDD1Q9H9R9 158 aa18.17■□□□□ 0.5
HMBOX1-209ENST00000522468 KCNQ5Q9NR82 932 aa18.17■□□□□ 0.5
HMBOX1-209ENST00000522468 CWC25Q9NXE8 425 aaPredicted RBP18.17■□□□□ 0.5
HMBOX1-209ENST00000522468 ZBTB12Q9Y330 459 aaPredicted RBP18.17■□□□□ 0.5
HMBOX1-209ENST00000522468 RIMBP2O15034 1052 aa18.16■□□□□ 0.5
HMBOX1-209ENST00000522468 IGKV5-2P06315 115 aa18.16■□□□□ 0.5
HMBOX1-209ENST00000522468 MICALL2Q8IY33 904 aa18.16■□□□□ 0.5
HMBOX1-209ENST00000522468 TSR2Q969E8 191 aaKnown RBP18.16■□□□□ 0.5
HMBOX1-209ENST00000522468 CAPNS2Q96L46 248 aa18.16■□□□□ 0.5
HMBOX1-209ENST00000522468 GPR101Q96P66 508 aaPredicted RBP18.16■□□□□ 0.5
HMBOX1-209ENST00000522468 CACNA1FO60840 1977 aa18.15■□□□□ 0.5
HMBOX1-209ENST00000522468 C6orf229H3BNL8 230 aa18.15■□□□□ 0.5
HMBOX1-209ENST00000522468 ECE2O60344 883 aa18.15■□□□□ 0.5
HMBOX1-209ENST00000522468 PDE8AO60658 829 aa18.15■□□□□ 0.5
HMBOX1-209ENST00000522468 HSP90B1P14625 803 aaKnown RBP18.15■□□□□ 0.5
HMBOX1-209ENST00000522468 NCBP3Q53F19 620 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms