RNA–Protein interactions for RNA: ENST00000520895.5

HDAC2-209, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-209ENST00000520895 TAF1P21675 1872 aa19.53■□□□□ 0.72
HDAC2-209ENST00000520895 BBOX1O75936 387 aa19.52■□□□□ 0.72
HDAC2-209ENST00000520895 CTSWP56202 376 aa19.52■□□□□ 0.72
HDAC2-209ENST00000520895 GRAPQ13588 217 aa19.52■□□□□ 0.72
HDAC2-209ENST00000520895 GRAPLQ8TC17 118 aaPredicted RBP19.52■□□□□ 0.72
HDAC2-209ENST00000520895 C7orf43Q8WVR3 580 aa19.52■□□□□ 0.72
HDAC2-209ENST00000520895 ARHGAP45Q92619 1136 aa19.52■□□□□ 0.72
HDAC2-209ENST00000520895 CCDC85AQ96PX6 553 aaPredicted RBP19.52■□□□□ 0.72
HDAC2-209ENST00000520895 FER1L6Q2WGJ9 1857 aa19.52■□□□□ 0.71
HDAC2-209ENST00000520895 SBF1O95248 1867 aa19.5■□□□□ 0.71
HDAC2-209ENST00000520895 CCDC88AQ3V6T2 1871 aa19.5■□□□□ 0.71
HDAC2-209ENST00000520895 CCT4P50991 539 aaKnown RBP19.5■□□□□ 0.71
HDAC2-209ENST00000520895 CASP7P55210 303 aa19.5■□□□□ 0.71
HDAC2-209ENST00000520895 RASSF7Q02833 373 aa19.5■□□□□ 0.71
HDAC2-209ENST00000520895 CC2D2BQ6DHV5 1058 aa19.5■□□□□ 0.71
HDAC2-209ENST00000520895 OLFM4Q6UX06 510 aa19.5■□□□□ 0.71
HDAC2-209ENST00000520895 RTKN2Q8IZC4 609 aa19.5■□□□□ 0.71
HDAC2-209ENST00000520895 TAOK3Q9H2K8 898 aa19.5■□□□□ 0.71
HDAC2-209ENST00000520895 NFKBIEO00221 500 aa19.49■□□□□ 0.71
HDAC2-209ENST00000520895 PLA2G12BQ9BX93 195 aa19.49■□□□□ 0.71
HDAC2-209ENST00000520895 ATP6V0A2Q9Y487 856 aa19.49■□□□□ 0.71
HDAC2-209ENST00000520895 GRIPAP1Q4V328 841 aa19.48■□□□□ 0.71
HDAC2-209ENST00000520895 ATF7IPQ6VMQ6 1270 aa19.48■□□□□ 0.71
HDAC2-209ENST00000520895 TMC4Q7Z404 712 aa19.48■□□□□ 0.71
HDAC2-209ENST00000520895 TTLL11Q8NHH1 800 aa19.48■□□□□ 0.71
HDAC2-209ENST00000520895 CELF1Q92879 486 aaKnown RBP19.48■□□□□ 0.71
HDAC2-209ENST00000520895 LMNB1P20700 586 aa19.47■□□□□ 0.71
HDAC2-209ENST00000520895 C9orf131Q5VYM1 1079 aa19.47■□□□□ 0.71
HDAC2-209ENST00000520895 ZKSCAN2Q63HK3 967 aa19.47■□□□□ 0.71
HDAC2-209ENST00000520895 SP8Q8IXZ3 490 aa19.47■□□□□ 0.71
HDAC2-209ENST00000520895 SEC31BQ9NQW1 1179 aa19.47■□□□□ 0.71
HDAC2-209ENST00000520895 RNF181Q9P0P0 153 aa19.47■□□□□ 0.71
HDAC2-209ENST00000520895 NBPF7P0C2Y1 421 aaPredicted RBP19.46■□□□□ 0.71
HDAC2-209ENST00000520895 TRIM27P14373 513 aa19.46■□□□□ 0.71
HDAC2-209ENST00000520895 RPS8P62241 208 aaKnown RBP19.46■□□□□ 0.71
HDAC2-209ENST00000520895 FKBP4Q02790 459 aaKnown RBP eCLIP19.46■□□□□ 0.71
HDAC2-209ENST00000520895 GREM2Q9H772 168 aa19.46■□□□□ 0.71
HDAC2-209ENST00000520895 CHMP3Q9Y3E7 222 aa19.46■□□□□ 0.71
HDAC2-209ENST00000520895 LTBP3Q9NS15 1303 aa19.46■□□□□ 0.71
HDAC2-209ENST00000520895 ANKRD18AQ8IVF6 992 aa19.45■□□□□ 0.7
HDAC2-209ENST00000520895 ZNF784Q8NCA9 323 aaPredicted RBP19.45■□□□□ 0.7
HDAC2-209ENST00000520895 CDC5LQ99459 802 aaKnown RBP19.45■□□□□ 0.7
HDAC2-209ENST00000520895 UTYO14607 1347 aa19.45■□□□□ 0.7
HDAC2-209ENST00000520895 RTL9Q8NET4 1388 aa19.44■□□□□ 0.7
HDAC2-209ENST00000520895 CSF1RP07333 972 aa19.44■□□□□ 0.7
HDAC2-209ENST00000520895 FOXO4P98177 505 aa19.44■□□□□ 0.7
HDAC2-209ENST00000520895 CLUAP1Q96AJ1 413 aa19.44■□□□□ 0.7
HDAC2-209ENST00000520895 USP44Q9H0E7 712 aa19.44■□□□□ 0.7
HDAC2-209ENST00000520895 RCAN3Q9UKA8 241 aa19.44■□□□□ 0.7
HDAC2-209ENST00000520895 SPEF2Q9C093 1822 aa19.44■□□□□ 0.7
HDAC2-209ENST00000520895 FAM161AQ3B820 660 aa19.43■□□□□ 0.7
HDAC2-209ENST00000520895 DPP8Q6V1X1 898 aaPredicted RBP19.43■□□□□ 0.7
HDAC2-209ENST00000520895 MPNDQ8N594 471 aa19.43■□□□□ 0.7
HDAC2-209ENST00000520895 SUCLG2Q96I99 432 aa19.43■□□□□ 0.7
HDAC2-209ENST00000520895 PSMD1Q99460 953 aa19.43■□□□□ 0.7
HDAC2-209ENST00000520895 DICER1Q9UPY3 1922 aaKnown RBP19.43■□□□□ 0.7
HDAC2-209ENST00000520895 COL4A1P02462 1669 aa19.43■□□□□ 0.7
HDAC2-209ENST00000520895 LRRC37AA6NMS7 1700 aa19.42■□□□□ 0.7
HDAC2-209ENST00000520895 ANKRD18BA2A2Z9 1011 aa19.42■□□□□ 0.7
HDAC2-209ENST00000520895 ITGA6P23229 1130 aa19.42■□□□□ 0.7
HDAC2-209ENST00000520895 PRELPP51888 382 aa19.42■□□□□ 0.7
HDAC2-209ENST00000520895 INTS3Q68E01 1043 aaKnown RBP19.42■□□□□ 0.7
HDAC2-209ENST00000520895 LMBR1LQ6UX01 489 aa19.42■□□□□ 0.7
HDAC2-209ENST00000520895 SLC51AQ86UW1 340 aa19.42■□□□□ 0.7
HDAC2-209ENST00000520895 FTSJ3Q8IY81 847 aaKnown RBP19.42■□□□□ 0.7
HDAC2-209ENST00000520895 ZNF277Q9NRM2 450 aaPredicted RBP19.42■□□□□ 0.7
HDAC2-209ENST00000520895 UBTFL1P0CB47 393 aaPredicted RBP19.41■□□□□ 0.7
HDAC2-209ENST00000520895 IGHMBP2P38935 993 aaKnown RBP19.41■□□□□ 0.7
HDAC2-209ENST00000520895 IFIT5Q13325 482 aaKnown RBP19.41■□□□□ 0.7
HDAC2-209ENST00000520895 EPHA10Q5JZY3 1008 aa19.41■□□□□ 0.7
HDAC2-209ENST00000520895 NSFL1CQ9UNZ2 370 aaKnown RBP19.41■□□□□ 0.7
HDAC2-209ENST00000520895 HDAC5Q9UQL6 1122 aa19.41■□□□□ 0.7
HDAC2-209ENST00000520895 TNNQ9UQP3 1299 aa19.41■□□□□ 0.7
HDAC2-209ENST00000520895 TIAM2Q8IVF5 1701 aa19.41■□□□□ 0.7
HDAC2-209ENST00000520895 SNED1Q8TER0 1413 aa19.41■□□□□ 0.7
HDAC2-209ENST00000520895 CCDC57Q2TAC2 916 aa19.4■□□□□ 0.7
HDAC2-209ENST00000520895 SUPT20HQ8NEM7 779 aa19.4■□□□□ 0.7
HDAC2-209ENST00000520895 IARSP41252 1262 aaKnown RBP19.39■□□□□ 0.69
HDAC2-209ENST00000520895 TAF7LQ5H9L4 462 aa19.39■□□□□ 0.69
HDAC2-209ENST00000520895 DZIP1LQ8IYY4 767 aaKnown RBP19.39■□□□□ 0.69
HDAC2-209ENST00000520895 KAZALD1Q96I82 304 aa19.39■□□□□ 0.69
HDAC2-209ENST00000520895 MPHOSPH8Q99549 860 aa19.39■□□□□ 0.69
HDAC2-209ENST00000520895 BICC1Q9H694 974 aaKnown RBP19.39■□□□□ 0.69
HDAC2-209ENST00000520895 GPSM2P81274 684 aa19.38■□□□□ 0.69
HDAC2-209ENST00000520895 TMEM57Q8N5G2 664 aa19.38■□□□□ 0.69
HDAC2-209ENST00000520895 BSDC1Q9NW68 430 aaPredicted RBP19.38■□□□□ 0.69
HDAC2-209ENST00000520895 ANKIB1Q9P2G1 1089 aa19.38■□□□□ 0.69
HDAC2-209ENST00000520895 ZC3H4Q9UPT8 1303 aaKnown RBP19.38■□□□□ 0.69
HDAC2-209ENST00000520895 GNAI3P08754 354 aa19.37■□□□□ 0.69
HDAC2-209ENST00000520895 MS4A1P11836 297 aa19.37■□□□□ 0.69
HDAC2-209ENST00000520895 ZNF526Q8TF50 670 aaPredicted RBP19.37■□□□□ 0.69
HDAC2-209ENST00000520895 JDP2Q8WYK2 163 aa19.37■□□□□ 0.69
HDAC2-209ENST00000520895 MEIS3Q99687 375 aa19.37■□□□□ 0.69
HDAC2-209ENST00000520895 RTFDC1Q9BY42 306 aaPredicted RBP19.37■□□□□ 0.69
HDAC2-209ENST00000520895 C6orf229H3BNL8 230 aa19.36■□□□□ 0.69
HDAC2-209ENST00000520895 PPIP5K2O43314 1243 aa19.36■□□□□ 0.69
HDAC2-209ENST00000520895 RABL6Q3YEC7 729 aaPredicted RBP19.36■□□□□ 0.69
HDAC2-209ENST00000520895 LARGE2Q8N3Y3 721 aa19.36■□□□□ 0.69
HDAC2-209ENST00000520895 ITPRIPQ8IWB1 547 aa19.35■□□□□ 0.69
HDAC2-209ENST00000520895 ANKRD44Q8N8A2 993 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms