RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 TARSP26639 723 aaKnown RBP7.76□□□□□ -1.17
HDAC2-208ENST00000520746 MLLT1Q03111 559 aaPredicted RBP7.76□□□□□ -1.17
HDAC2-208ENST00000520746 DPYDQ12882 1025 aa7.76□□□□□ -1.17
HDAC2-208ENST00000520746 WFDC8Q8IUA0 241 aa7.76□□□□□ -1.17
HDAC2-208ENST00000520746 IFT43Q96FT9 208 aa7.76□□□□□ -1.17
HDAC2-208ENST00000520746 MEGF10Q96KG7 1140 aa7.76□□□□□ -1.17
HDAC2-208ENST00000520746 ARSDP51689 593 aa7.75□□□□□ -1.17
HDAC2-208ENST00000520746 GPLD1P80108 840 aa7.75□□□□□ -1.17
HDAC2-208ENST00000520746 PTK7Q13308 1070 aa7.75□□□□□ -1.17
HDAC2-208ENST00000520746 DGKZQ13574 1117 aa7.75□□□□□ -1.17
HDAC2-208ENST00000520746 LCE3BQ5TA77 95 aa7.75□□□□□ -1.17
HDAC2-208ENST00000520746 ELMSAN1Q6PJG2 1045 aa7.75□□□□□ -1.17
HDAC2-208ENST00000520746 LARP1Q6PKG0 1096 aaKnown RBP7.75□□□□□ -1.17
HDAC2-208ENST00000520746 TTC9Q92623 222 aa7.75□□□□□ -1.17
HDAC2-208ENST00000520746 DEAF1O75398 565 aaPredicted RBP7.74□□□□□ -1.17
HDAC2-208ENST00000520746 IGF2-ASQ6U949 168 aa7.74□□□□□ -1.17
HDAC2-208ENST00000520746 QTRT2Q9H974 415 aaKnown RBP7.74□□□□□ -1.17
HDAC2-208ENST00000520746 USP17L15C9J2P7 530 aa7.73□□□□□ -1.17
HDAC2-208ENST00000520746 USP17L10C9JJH3 530 aa7.73□□□□□ -1.17
HDAC2-208ENST00000520746 USP17L13C9JLJ4 530 aa7.73□□□□□ -1.17
HDAC2-208ENST00000520746 USP17L12C9JPN9 530 aa7.73□□□□□ -1.17
HDAC2-208ENST00000520746 USP17L11C9JVI0 530 aa7.73□□□□□ -1.17
HDAC2-208ENST00000520746 USP17L21D6R901 530 aa7.73□□□□□ -1.17
HDAC2-208ENST00000520746 USP17L18D6R9N7 530 aa7.73□□□□□ -1.17
HDAC2-208ENST00000520746 USP17L22D6RA61 530 aa7.73□□□□□ -1.17
HDAC2-208ENST00000520746 USP17L17D6RBQ6 530 aa7.73□□□□□ -1.17
HDAC2-208ENST00000520746 USP17L19D6RCP7 530 aa7.73□□□□□ -1.17
HDAC2-208ENST00000520746 USP17L20D6RJB6 530 aa7.73□□□□□ -1.17
HDAC2-208ENST00000520746 SASH3O75995 380 aa7.73□□□□□ -1.17
HDAC2-208ENST00000520746 RARAP10276 462 aa7.73□□□□□ -1.17
HDAC2-208ENST00000520746 USP17L24Q0WX57 530 aa7.73□□□□□ -1.17
HDAC2-208ENST00000520746 KANK4Q5T7N3 995 aaPredicted RBP7.73□□□□□ -1.17
HDAC2-208ENST00000520746 SMG9Q9H0W8 520 aaKnown RBP7.73□□□□□ -1.17
HDAC2-208ENST00000520746 C11orf16Q9NQ32 467 aa7.73□□□□□ -1.17
HDAC2-208ENST00000520746 RNF112Q9ULX5 631 aa7.73□□□□□ -1.17
HDAC2-208ENST00000520746 MICAL2O94851 1124 aa7.72□□□□□ -1.17
HDAC2-208ENST00000520746 HFE2Q6ZVN8 426 aa7.72□□□□□ -1.17
HDAC2-208ENST00000520746 ANKMY2Q8IV38 441 aa7.72□□□□□ -1.17
HDAC2-208ENST00000520746 FNBP4Q8N3X1 1017 aaPredicted RBP7.72□□□□□ -1.17
HDAC2-208ENST00000520746 FAM196BA6NMK8 535 aa7.71□□□□□ -1.18
HDAC2-208ENST00000520746 DLL1O00548 723 aa7.71□□□□□ -1.18
HDAC2-208ENST00000520746 NRLP54845 237 aa7.71□□□□□ -1.18
HDAC2-208ENST00000520746 PRR23CQ6ZRP0 262 aa7.71□□□□□ -1.18
HDAC2-208ENST00000520746 CLUAP1Q96AJ1 413 aa7.71□□□□□ -1.18
HDAC2-208ENST00000520746 EIF2AK2P19525 551 aaKnown RBP7.7□□□□□ -1.18
HDAC2-208ENST00000520746 PROSER2Q86WR7 435 aaPredicted RBP7.7□□□□□ -1.18
HDAC2-208ENST00000520746 MYO19Q96H55 970 aa7.7□□□□□ -1.18
HDAC2-208ENST00000520746 PPP1R12CQ9BZL4 782 aa7.7□□□□□ -1.18
HDAC2-208ENST00000520746 USP20Q9Y2K6 914 aa7.7□□□□□ -1.18
HDAC2-208ENST00000520746 OPLAHO14841 1288 aa7.69□□□□□ -1.18
HDAC2-208ENST00000520746 FOXO3O43524 673 aa7.69□□□□□ -1.18
HDAC2-208ENST00000520746 WEE1P30291 646 aa7.69□□□□□ -1.18
HDAC2-208ENST00000520746 C11orf91Q3C1V1 193 aa7.69□□□□□ -1.18
HDAC2-208ENST00000520746 DZIP1LQ8IYY4 767 aaKnown RBP7.69□□□□□ -1.18
HDAC2-208ENST00000520746 ARXQ96QS3 562 aa7.69□□□□□ -1.18
HDAC2-208ENST00000520746 TLR7Q9NYK1 1049 aaKnown RBP7.69□□□□□ -1.18
HDAC2-208ENST00000520746 EGFRP00533 1210 aa7.68□□□□□ -1.18
HDAC2-208ENST00000520746 AKTIPQ9H8T0 292 aa7.68□□□□□ -1.18
HDAC2-208ENST00000520746 RTCBQ9Y3I0 505 aaKnown RBP7.68□□□□□ -1.18
HDAC2-208ENST00000520746 ALX3O95076 343 aa7.67□□□□□ -1.18
HDAC2-208ENST00000520746 ARID4AP29374 1257 aaPredicted RBP7.67□□□□□ -1.18
HDAC2-208ENST00000520746 KRTAP19-1Q8IUB9 90 aa7.67□□□□□ -1.18
HDAC2-208ENST00000520746 PLD4Q96BZ4 506 aa7.67□□□□□ -1.18
HDAC2-208ENST00000520746 LRFN2Q9ULH4 789 aa7.67□□□□□ -1.18
HDAC2-208ENST00000520746 GTF3C3Q9Y5Q9 886 aa7.67□□□□□ -1.18
HDAC2-208ENST00000520746 F8W735 103 aaPredicted RBP7.66□□□□□ -1.18
HDAC2-208ENST00000520746 J3QW42 95 aa7.66□□□□□ -1.18
HDAC2-208ENST00000520746 XYLBO75191 536 aa7.66□□□□□ -1.18
HDAC2-208ENST00000520746 FSTP19883 344 aa7.66□□□□□ -1.18
HDAC2-208ENST00000520746 VTI1AQ96AJ9 217 aa7.66□□□□□ -1.18
HDAC2-208ENST00000520746 MRPL18Q9H0U6 180 aaKnown RBP7.66□□□□□ -1.18
HDAC2-208ENST00000520746 VRTNQ9H8Y1 702 aa7.66□□□□□ -1.18
HDAC2-208ENST00000520746 LOC102724428A0A0B4J2F2 783 aa7.65□□□□□ -1.18
HDAC2-208ENST00000520746 SIK1P57059 783 aa7.65□□□□□ -1.18
HDAC2-208ENST00000520746 GDF6Q6KF10 455 aaPredicted RBP7.65□□□□□ -1.18
HDAC2-208ENST00000520746 RGL4Q8IZJ4 473 aa7.65□□□□□ -1.18
HDAC2-208ENST00000520746 CMTR1Q8N1G2 835 aaKnown RBP7.65□□□□□ -1.18
HDAC2-208ENST00000520746 TMEM130Q8N3G9 435 aa7.65□□□□□ -1.18
HDAC2-208ENST00000520746 CALR3Q96L12 384 aaKnown RBP7.65□□□□□ -1.18
HDAC2-208ENST00000520746 KCNMB2Q9Y691 235 aa7.65□□□□□ -1.18
HDAC2-208ENST00000520746 MMP20O60882 483 aa7.64□□□□□ -1.19
HDAC2-208ENST00000520746 PSAPP07602 524 aa7.64□□□□□ -1.19
HDAC2-208ENST00000520746 HOXD8P13378 290 aaPredicted RBP7.64□□□□□ -1.19
HDAC2-208ENST00000520746 LMOD1P29536 600 aaPredicted RBP7.64□□□□□ -1.19
HDAC2-208ENST00000520746 SETDB1Q15047 1291 aa7.64□□□□□ -1.19
HDAC2-208ENST00000520746 MCTP1Q6DN14 999 aa7.64□□□□□ -1.19
HDAC2-208ENST00000520746 Q6ZS46 218 aa7.64□□□□□ -1.19
HDAC2-208ENST00000520746 TREML1Q86YW5 311 aa7.64□□□□□ -1.19
HDAC2-208ENST00000520746 IL22RA1Q8N6P7 574 aa7.64□□□□□ -1.19
HDAC2-208ENST00000520746 NSUN5Q96P11 429 aaKnown RBP7.64□□□□□ -1.19
HDAC2-208ENST00000520746 PCMTD2Q9NV79 361 aa7.64□□□□□ -1.19
HDAC2-208ENST00000520746 GHRHP01286 108 aa7.63□□□□□ -1.19
HDAC2-208ENST00000520746 SRA1Q9HD15 236 aaKnown RBP7.63□□□□□ -1.19
HDAC2-208ENST00000520746 SSTR4P31391 388 aa7.62□□□□□ -1.19
HDAC2-208ENST00000520746 SOX18P35713 384 aa7.62□□□□□ -1.19
HDAC2-208ENST00000520746 SLC51AQ86UW1 340 aa7.62□□□□□ -1.19
HDAC2-208ENST00000520746 TRIM33Q9UPN9 1127 aa7.62□□□□□ -1.19
HDAC2-208ENST00000520746 CD97P48960 835 aa7.61□□□□□ -1.19
HDAC2-208ENST00000520746 COX20Q5RI15 118 aa7.61□□□□□ -1.19
HDAC2-208ENST00000520746 AGGF1Q8N302 714 aaeCLIP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms