RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 BTLAQ7Z6A9 289 aa7.76□□□□□ -1.17
SQLE-204ENST00000520493 SYT9Q86SS6 491 aa7.76□□□□□ -1.17
SQLE-204ENST00000520493 TGFBR3LH3BV60 316 aa7.75□□□□□ -1.17
SQLE-204ENST00000520493 ALBP02768 609 aa7.75□□□□□ -1.17
SQLE-204ENST00000520493 EPB42P16452 691 aa7.75□□□□□ -1.17
SQLE-204ENST00000520493 TAL1P17542 331 aaPredicted RBP7.75□□□□□ -1.17
SQLE-204ENST00000520493 KCNQ4P56696 695 aa7.75□□□□□ -1.17
SQLE-204ENST00000520493 PBXIP1Q96AQ6 731 aa7.75□□□□□ -1.17
SQLE-204ENST00000520493 SIN3BO75182 1162 aa7.74□□□□□ -1.17
SQLE-204ENST00000520493 ATG7O95352 703 aa7.74□□□□□ -1.17
SQLE-204ENST00000520493 MICALL1Q8N3F8 863 aa7.74□□□□□ -1.17
SQLE-204ENST00000520493 ARID3CA6NKF2 412 aa7.73□□□□□ -1.17
SQLE-204ENST00000520493 NID1P14543 1247 aa7.73□□□□□ -1.17
SQLE-204ENST00000520493 SSTR4P31391 388 aa7.73□□□□□ -1.17
SQLE-204ENST00000520493 SHISA2Q6UWI4 295 aa7.73□□□□□ -1.17
SQLE-204ENST00000520493 EFCC1Q9HA90 598 aa7.73□□□□□ -1.17
SQLE-204ENST00000520493 PRDM6Q9NQX0 595 aa7.73□□□□□ -1.17
SQLE-204ENST00000520493 PRMT3O60678 531 aa7.72□□□□□ -1.17
SQLE-204ENST00000520493 NRG1Q02297 640 aaPredicted RBP7.72□□□□□ -1.17
SQLE-204ENST00000520493 DGKZQ13574 1117 aa7.72□□□□□ -1.17
SQLE-204ENST00000520493 STK32AQ8WU08 396 aa7.72□□□□□ -1.17
SQLE-204ENST00000520493 PNMA5Q96PV4 448 aa7.72□□□□□ -1.17
SQLE-204ENST00000520493 SLC30A3Q99726 388 aa7.72□□□□□ -1.17
SQLE-204ENST00000520493 ZMIZ1Q9ULJ6 1067 aa7.72□□□□□ -1.17
SQLE-204ENST00000520493 STARD13Q9Y3M8 1113 aa7.72□□□□□ -1.17
SQLE-204ENST00000520493 C11orf91Q3C1V1 193 aa7.71□□□□□ -1.18
SQLE-204ENST00000520493 LENG1Q96BZ8 264 aaPredicted RBP7.71□□□□□ -1.18
SQLE-204ENST00000520493 MYO19Q96H55 970 aa7.71□□□□□ -1.18
SQLE-204ENST00000520493 PRIMPOLQ96LW4 560 aa7.71□□□□□ -1.18
SQLE-204ENST00000520493 MDFIQ99750 246 aa7.71□□□□□ -1.18
SQLE-204ENST00000520493 QTRT2Q9H974 415 aaKnown RBP7.71□□□□□ -1.18
SQLE-204ENST00000520493 KLK14Q9P0G3 267 aa7.71□□□□□ -1.18
SQLE-204ENST00000520493 ADARB2-AS1A8MUL3 147 aa7.7□□□□□ -1.18
SQLE-204ENST00000520493 SUPT5HO00267 1087 aaKnown RBP7.7□□□□□ -1.18
SQLE-204ENST00000520493 SRPK2P78362 688 aaKnown RBP7.7□□□□□ -1.18
SQLE-204ENST00000520493 RAB44Q7Z6P3 723 aaPredicted RBP7.7□□□□□ -1.18
SQLE-204ENST00000520493 TNFRSF25Q93038 417 aa7.7□□□□□ -1.18
SQLE-204ENST00000520493 BHMTQ93088 406 aa7.7□□□□□ -1.18
SQLE-204ENST00000520493 USP21Q9UK80 565 aa7.7□□□□□ -1.18
SQLE-204ENST00000520493 A0A0A0MRY4 1105 aa7.69□□□□□ -1.18
SQLE-204ENST00000520493 IDH3AP50213 366 aa7.69□□□□□ -1.18
SQLE-204ENST00000520493 ARSDP51689 593 aa7.69□□□□□ -1.18
SQLE-204ENST00000520493 FKBP5Q13451 457 aaPredicted RBP7.69□□□□□ -1.18
SQLE-204ENST00000520493 TMEM164Q5U3C3 297 aa7.69□□□□□ -1.18
SQLE-204ENST00000520493 SSBP4Q9BWG4 385 aaPredicted RBP7.69□□□□□ -1.18
SQLE-204ENST00000520493 PTCD1O75127 700 aaKnown RBP7.68□□□□□ -1.18
SQLE-204ENST00000520493 ADH7P40394 386 aa7.68□□□□□ -1.18
SQLE-204ENST00000520493 CCINQ13939 588 aa7.68□□□□□ -1.18
SQLE-204ENST00000520493 CCDC82Q8N4S0 544 aa7.68□□□□□ -1.18
SQLE-204ENST00000520493 UBE2OQ9C0C9 1292 aaKnown RBP7.68□□□□□ -1.18
SQLE-204ENST00000520493 BCS1LQ9Y276 419 aa7.68□□□□□ -1.18
SQLE-204ENST00000520493 MICAL2O94851 1124 aa7.67□□□□□ -1.18
SQLE-204ENST00000520493 TBC1D8BQ0IIM8 1120 aa7.67□□□□□ -1.18
SQLE-204ENST00000520493 OCLNQ16625 522 aa7.67□□□□□ -1.18
SQLE-204ENST00000520493 COL26A1Q96A83 441 aa7.67□□□□□ -1.18
SQLE-204ENST00000520493 IFT43Q96FT9 208 aa7.67□□□□□ -1.18
SQLE-204ENST00000520493 CXXC1Q9P0U4 656 aaPredicted RBP7.67□□□□□ -1.18
SQLE-204ENST00000520493 DMGDHQ9UI17 866 aaKnown RBP7.67□□□□□ -1.18
SQLE-204ENST00000520493 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.67□□□□□ -1.18
SQLE-204ENST00000520493 INPP5BP32019 993 aa7.66□□□□□ -1.18
SQLE-204ENST00000520493 RAC1P63000 192 aa7.66□□□□□ -1.18
SQLE-204ENST00000520493 FAM69CQ0P6D2 419 aa7.66□□□□□ -1.18
SQLE-204ENST00000520493 C16orf46Q6P387 395 aa7.66□□□□□ -1.18
SQLE-204ENST00000520493 CLP1Q92989 425 aaKnown RBP7.66□□□□□ -1.18
SQLE-204ENST00000520493 IGFLR1Q9H665 355 aa7.66□□□□□ -1.18
SQLE-204ENST00000520493 C11orf16Q9NQ32 467 aa7.66□□□□□ -1.18
SQLE-204ENST00000520493 OAS3Q9Y6K5 1087 aaKnown RBP7.66□□□□□ -1.18
SQLE-204ENST00000520493 PPP1R15AO75807 674 aaPredicted RBP7.65□□□□□ -1.18
SQLE-204ENST00000520493 NFKB1P19838 968 aa7.65□□□□□ -1.18
SQLE-204ENST00000520493 ARID4AP29374 1257 aaPredicted RBP7.65□□□□□ -1.18
SQLE-204ENST00000520493 PCSK7Q16549 785 aa7.65□□□□□ -1.18
SQLE-204ENST00000520493 MKNK1Q9BUB5 465 aa7.65□□□□□ -1.18
SQLE-204ENST00000520493 GSX2Q9BZM3 304 aa7.65□□□□□ -1.18
SQLE-204ENST00000520493 BRD2P25440 801 aaKnown RBP7.64□□□□□ -1.19
SQLE-204ENST00000520493 COX20Q5RI15 118 aa7.64□□□□□ -1.19
SQLE-204ENST00000520493 TREML1Q86YW5 311 aa7.64□□□□□ -1.19
SQLE-204ENST00000520493 LRFN2Q9ULH4 789 aa7.64□□□□□ -1.19
SQLE-204ENST00000520493 LILRB5O75023 590 aa7.63□□□□□ -1.19
SQLE-204ENST00000520493 C20orf204Q6ZNR8 217 aa7.63□□□□□ -1.19
SQLE-204ENST00000520493 FAM13BQ9NYF5 915 aa7.63□□□□□ -1.19
SQLE-204ENST00000520493 ATP2B4P23634 1241 aa7.62□□□□□ -1.19
SQLE-204ENST00000520493 SLC6A14Q9UN76 642 aa7.62□□□□□ -1.19
SQLE-204ENST00000520493 RTCBQ9Y3I0 505 aaKnown RBP7.62□□□□□ -1.19
SQLE-204ENST00000520493 MAP3K6O95382 1288 aa7.61□□□□□ -1.19
SQLE-204ENST00000520493 RARAP10276 462 aa7.61□□□□□ -1.19
SQLE-204ENST00000520493 GP2P55259 537 aaKnown RBP7.61□□□□□ -1.19
SQLE-204ENST00000520493 JAG1P78504 1218 aa7.61□□□□□ -1.19
SQLE-204ENST00000520493 NAA30Q147X3 362 aaPredicted RBP7.61□□□□□ -1.19
SQLE-204ENST00000520493 KRT25Q7Z3Z0 450 aa7.61□□□□□ -1.19
SQLE-204ENST00000520493 RGL4Q8IZJ4 473 aa7.61□□□□□ -1.19
SQLE-204ENST00000520493 DNAJB12Q9NXW2 375 aaKnown RBP7.61□□□□□ -1.19
SQLE-204ENST00000520493 XYLBO75191 536 aa7.6□□□□□ -1.19
SQLE-204ENST00000520493 IREB2P48200 963 aaKnown RBP7.6□□□□□ -1.19
SQLE-204ENST00000520493 CMTR1Q8N1G2 835 aaKnown RBP7.6□□□□□ -1.19
SQLE-204ENST00000520493 WFDC12Q8WWY7 111 aa7.6□□□□□ -1.19
SQLE-204ENST00000520493 SAP130Q9H0E3 1048 aa7.6□□□□□ -1.19
SQLE-204ENST00000520493 CD97P48960 835 aa7.59□□□□□ -1.19
SQLE-204ENST00000520493 DHX32Q7L7V1 743 aaKnown RBP7.59□□□□□ -1.19
SQLE-204ENST00000520493 ABTB2Q8N961 1025 aa7.59□□□□□ -1.19
SQLE-204ENST00000520493 PIK3R5Q8WYR1 880 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms