RNA–Protein interactions for RNA: ENST00000520170.1

HDAC2-207, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-207ENST00000520170 PAXIP1Q6ZW49 1069 aaPredicted RBP26.16■■□□□ 1.78
HDAC2-207ENST00000520170 ADARB2Q9NS39 739 aaKnown RBP26.16■■□□□ 1.78
HDAC2-207ENST00000520170 DDX10Q13206 875 aaKnown RBP26.15■■□□□ 1.78
HDAC2-207ENST00000520170 CHPF2Q9P2E5 772 aa26.15■■□□□ 1.78
HDAC2-207ENST00000520170 GMPSP49915 693 aaPredicted RBP26.14■■□□□ 1.78
HDAC2-207ENST00000520170 MAP2K1Q02750 393 aaPredicted RBP26.14■■□□□ 1.78
HDAC2-207ENST00000520170 GRAPQ13588 217 aa26.14■■□□□ 1.78
HDAC2-207ENST00000520170 GRAPLQ8TC17 118 aaPredicted RBP26.14■■□□□ 1.78
HDAC2-207ENST00000520170 MYBBP1AQ9BQG0 1328 aaKnown RBP26.14■■□□□ 1.77
HDAC2-207ENST00000520170 GRM1Q13255 1194 aa26.13■■□□□ 1.77
HDAC2-207ENST00000520170 CST9Q5W186 159 aa26.13■■□□□ 1.77
HDAC2-207ENST00000520170 CIAPIN1Q6FI81 312 aa26.13■■□□□ 1.77
HDAC2-207ENST00000520170 TRIM35Q9UPQ4 493 aa26.13■■□□□ 1.77
HDAC2-207ENST00000520170 RAD17O75943 681 aa26.12■■□□□ 1.77
HDAC2-207ENST00000520170 KIAA2012Q0VF49 1180 aa26.12■■□□□ 1.77
HDAC2-207ENST00000520170 WDR43Q15061 677 aaKnown RBP eCLIP26.12■■□□□ 1.77
HDAC2-207ENST00000520170 HDGFL1Q5TGJ6 251 aa26.12■■□□□ 1.77
HDAC2-207ENST00000520170 RUNDC1Q96C34 613 aa26.12■■□□□ 1.77
HDAC2-207ENST00000520170 CAPNS2Q96L46 248 aa26.12■■□□□ 1.77
HDAC2-207ENST00000520170 HSPA8P11142 646 aaKnown RBP26.11■■□□□ 1.77
HDAC2-207ENST00000520170 CYP4F22Q6NT55 531 aa26.11■■□□□ 1.77
HDAC2-207ENST00000520170 BCL2L13Q9BXK5 485 aa26.11■■□□□ 1.77
HDAC2-207ENST00000520170 DDX60Q8IY21 1712 aaKnown RBP26.11■■□□□ 1.77
HDAC2-207ENST00000520170 ECE1P42892 770 aa26.1■■□□□ 1.77
HDAC2-207ENST00000520170 ANKRD13DQ6ZTN6 518 aa26.1■■□□□ 1.77
HDAC2-207ENST00000520170 PLBD2Q8NHP8 589 aa26.1■■□□□ 1.77
HDAC2-207ENST00000520170 TNIP1Q15025 636 aa26.09■■□□□ 1.77
HDAC2-207ENST00000520170 ATP5J2-PTCD1G3V325 749 aa26.08■■□□□ 1.77
HDAC2-207ENST00000520170 FAM89AQ96GI7 184 aa26.08■■□□□ 1.77
HDAC2-207ENST00000520170 GPR101Q96P66 508 aaPredicted RBP26.08■■□□□ 1.77
HDAC2-207ENST00000520170 DBF4Q9UBU7 674 aaPredicted RBP26.08■■□□□ 1.77
HDAC2-207ENST00000520170 TLL2Q9Y6L7 1015 aa26.08■■□□□ 1.77
HDAC2-207ENST00000520170 TMC4Q7Z404 712 aa26.07■■□□□ 1.76
HDAC2-207ENST00000520170 GLIS2Q9BZE0 524 aaPredicted RBP26.07■■□□□ 1.76
HDAC2-207ENST00000520170 ADAMTS8Q9UP79 889 aa26.07■■□□□ 1.76
HDAC2-207ENST00000520170 YDJCA8MPS7 323 aa26.06■■□□□ 1.76
HDAC2-207ENST00000520170 CELF2O95319 508 aaKnown RBP26.06■■□□□ 1.76
HDAC2-207ENST00000520170 RTL5Q5HYW3 569 aaPredicted RBP26.06■■□□□ 1.76
HDAC2-207ENST00000520170 ISCA1Q9BUE6 129 aa26.06■■□□□ 1.76
HDAC2-207ENST00000520170 BEGAINQ9BUH8 593 aa26.06■■□□□ 1.76
HDAC2-207ENST00000520170 LRRC37AA6NMS7 1700 aa26.05■■□□□ 1.76
HDAC2-207ENST00000520170 DUOX1Q9NRD9 1551 aa26.05■■□□□ 1.76
HDAC2-207ENST00000520170 HOXB7P09629 217 aa26.05■■□□□ 1.76
HDAC2-207ENST00000520170 CNOT7Q9UIV1 285 aaKnown RBP26.05■■□□□ 1.76
HDAC2-207ENST00000520170 CDHR2Q9BYE9 1310 aa26.05■■□□□ 1.76
HDAC2-207ENST00000520170 THSD7BQ9C0I4 1608 aa26.04■■□□□ 1.76
HDAC2-207ENST00000520170 HIRAP54198 1017 aaPredicted RBP26.04■■□□□ 1.76
HDAC2-207ENST00000520170 DUSP27Q5VZP5 1158 aa26.04■■□□□ 1.76
HDAC2-207ENST00000520170 TRPM4Q8TD43 1214 aa26.04■■□□□ 1.76
HDAC2-207ENST00000520170 CELF1Q92879 486 aaKnown RBP26.04■■□□□ 1.76
HDAC2-207ENST00000520170 HYPKQ9NX55 129 aa26.04■■□□□ 1.76
HDAC2-207ENST00000520170 PGAP2Q9UHJ9 254 aa26.04■■□□□ 1.76
HDAC2-207ENST00000520170 NSFL1CQ9UNZ2 370 aaKnown RBP26.04■■□□□ 1.76
HDAC2-207ENST00000520170 POLR2AP24928 1970 aaKnown RBP26.04■■□□□ 1.76
HDAC2-207ENST00000520170 SHTN1A0MZ66 631 aa26.03■■□□□ 1.76
HDAC2-207ENST00000520170 SF3B3Q15393 1217 aaKnown RBP26.03■■□□□ 1.76
HDAC2-207ENST00000520170 WASHC4Q2M389 1173 aa26.03■■□□□ 1.76
HDAC2-207ENST00000520170 CFAP44Q96MT7 982 aa26.03■■□□□ 1.76
HDAC2-207ENST00000520170 ZNF408Q9H9D4 720 aa26.03■■□□□ 1.76
HDAC2-207ENST00000520170 H7C1D1 291 aa26.02■■□□□ 1.76
HDAC2-207ENST00000520170 RIMBP2O15034 1052 aa26.02■■□□□ 1.76
HDAC2-207ENST00000520170 AOC2O75106 756 aa26.02■■□□□ 1.76
HDAC2-207ENST00000520170 SAPCD2Q86UD0 394 aa26.02■■□□□ 1.76
HDAC2-207ENST00000520170 ZC3H15Q8WU90 426 aaKnown RBP26.02■■□□□ 1.76
HDAC2-207ENST00000520170 ZBTB12Q9Y330 459 aaPredicted RBP26.02■■□□□ 1.76
HDAC2-207ENST00000520170 C6orf229H3BNL8 230 aa26.01■■□□□ 1.75
HDAC2-207ENST00000520170 DBNDD1Q9H9R9 158 aa26.01■■□□□ 1.75
HDAC2-207ENST00000520170 MBIPQ9NS73 344 aa26.01■■□□□ 1.75
HDAC2-207ENST00000520170 IRS4O14654 1257 aaPredicted RBP26■■□□□ 1.75
HDAC2-207ENST00000520170 CDC37L1Q7L3B6 337 aa26■■□□□ 1.75
HDAC2-207ENST00000520170 MICALL2Q8IY33 904 aa26■■□□□ 1.75
HDAC2-207ENST00000520170 PSMD14O00487 310 aa25.99■■□□□ 1.75
HDAC2-207ENST00000520170 MAP2K2P36507 400 aa25.99■■□□□ 1.75
HDAC2-207ENST00000520170 GPSM2P81274 684 aa25.99■■□□□ 1.75
HDAC2-207ENST00000520170 POLLQ9UGP5 575 aa25.99■■□□□ 1.75
HDAC2-207ENST00000520170 COL4A1P02462 1669 aa25.99■■□□□ 1.75
HDAC2-207ENST00000520170 RIC3Q7Z5B4 369 aa25.98■■□□□ 1.75
HDAC2-207ENST00000520170 TSKSQ9UJT2 592 aa25.98■■□□□ 1.75
HDAC2-207ENST00000520170 TRIM28Q13263 835 aaKnown RBP25.97■■□□□ 1.75
HDAC2-207ENST00000520170 DOK7Q18PE1 504 aa25.97■■□□□ 1.75
HDAC2-207ENST00000520170 SAMD7Q7Z3H4 446 aa25.97■■□□□ 1.75
HDAC2-207ENST00000520170 USP48Q86UV5 1035 aa25.97■■□□□ 1.75
HDAC2-207ENST00000520170 ABHD8Q96I13 439 aa25.97■■□□□ 1.75
HDAC2-207ENST00000520170 ELL2O00472 640 aaPredicted RBP25.96■■□□□ 1.75
HDAC2-207ENST00000520170 RPS8P62241 208 aaKnown RBP25.96■■□□□ 1.75
HDAC2-207ENST00000520170 GOLGA2Q08379 1002 aa25.96■■□□□ 1.75
HDAC2-207ENST00000520170 DPF2Q92785 391 aa25.96■■□□□ 1.75
HDAC2-207ENST00000520170 ECE2O60344 883 aa25.95■■□□□ 1.74
HDAC2-207ENST00000520170 TBC1D10BQ4KMP7 808 aaPredicted RBP25.95■■□□□ 1.74
HDAC2-207ENST00000520170 HHIPL1Q96JK4 782 aa25.95■■□□□ 1.74
HDAC2-207ENST00000520170 EYA3Q99504 573 aa25.95■■□□□ 1.74
HDAC2-207ENST00000520170 PHAXQ9H814 394 aaKnown RBP25.95■■□□□ 1.74
HDAC2-207ENST00000520170 KCNQ5Q9NR82 932 aa25.95■■□□□ 1.74
HDAC2-207ENST00000520170 CASP8AP2Q9UKL3 1982 aa25.95■■□□□ 1.74
HDAC2-207ENST00000520170 ZNF853P0CG23 659 aa25.94■■□□□ 1.74
HDAC2-207ENST00000520170 DLK2Q6UY11 383 aa25.94■■□□□ 1.74
HDAC2-207ENST00000520170 TBC1D16Q8TBP0 767 aa25.94■■□□□ 1.74
HDAC2-207ENST00000520170 APAF1O14727 1248 aa25.93■■□□□ 1.74
HDAC2-207ENST00000520170 RBM26Q5T8P6 1007 aaKnown RBP25.93■■□□□ 1.74
HDAC2-207ENST00000520170 ZBTB38Q8NAP3 1195 aaPredicted RBP25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms