RNA–Protein interactions for RNA: ENST00000519116.5

CTNNA1-214, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-214ENST00000519116 ZNF408Q9H9D4 720 aa8.7□□□□□ -1.02
CTNNA1-214ENST00000519116 PGAP2Q9UHJ9 254 aa8.7□□□□□ -1.02
CTNNA1-214ENST00000519116 PCDHB8Q9UN66 801 aa8.7□□□□□ -1.02
CTNNA1-214ENST00000519116 TIMELESSQ9UNS1 1208 aa8.7□□□□□ -1.02
CTNNA1-214ENST00000519116 USP16Q9Y5T5 823 aa8.7□□□□□ -1.02
CTNNA1-214ENST00000519116 SCN11AQ9UI33 1791 aa8.7□□□□□ -1.02
CTNNA1-214ENST00000519116 PPIP5K2O43314 1243 aa8.69□□□□□ -1.02
CTNNA1-214ENST00000519116 KCNQ3O43525 872 aa8.69□□□□□ -1.02
CTNNA1-214ENST00000519116 PIP4K2AP48426 406 aaPredicted RBP8.69□□□□□ -1.02
CTNNA1-214ENST00000519116 CDC37L1Q7L3B6 337 aa8.69□□□□□ -1.02
CTNNA1-214ENST00000519116 TMX4Q9H1E5 349 aaPredicted RBP8.69□□□□□ -1.02
CTNNA1-214ENST00000519116 KIF7Q2M1P5 1343 aa8.69□□□□□ -1.02
CTNNA1-214ENST00000519116 CDHR2Q9BYE9 1310 aa8.69□□□□□ -1.02
CTNNA1-214ENST00000519116 LTBP1Q14766 1721 aa8.68□□□□□ -1.02
CTNNA1-214ENST00000519116 CCDC88AQ3V6T2 1871 aa8.68□□□□□ -1.02
CTNNA1-214ENST00000519116 PPEF1O14829 653 aaPredicted RBP8.68□□□□□ -1.02
CTNNA1-214ENST00000519116 GMPSP49915 693 aaPredicted RBP8.68□□□□□ -1.02
CTNNA1-214ENST00000519116 HUNKP57058 714 aa8.68□□□□□ -1.02
CTNNA1-214ENST00000519116 EIF4G2P78344 907 aaKnown RBP eCLIP8.68□□□□□ -1.02
CTNNA1-214ENST00000519116 CXCL9Q07325 125 aa8.68□□□□□ -1.02
CTNNA1-214ENST00000519116 AMER1Q5JTC6 1135 aaPredicted RBP8.68□□□□□ -1.02
CTNNA1-214ENST00000519116 GCC1Q96CN9 775 aa8.68□□□□□ -1.02
CTNNA1-214ENST00000519116 RBM17Q96I25 401 aaKnown RBP8.68□□□□□ -1.02
CTNNA1-214ENST00000519116 CRAMP1Q96RY5 1269 aa8.68□□□□□ -1.02
CTNNA1-214ENST00000519116 ZNRF3Q9ULT6 936 aa8.68□□□□□ -1.02
CTNNA1-214ENST00000519116 CEMIPQ8WUJ3 1361 aa8.68□□□□□ -1.02
CTNNA1-214ENST00000519116 NPC1L1Q9UHC9 1359 aa8.68□□□□□ -1.02
CTNNA1-214ENST00000519116 NBPF26B4DH59 902 aa8.67□□□□□ -1.02
CTNNA1-214ENST00000519116 HLFQ16534 295 aa8.67□□□□□ -1.02
CTNNA1-214ENST00000519116 AOC3Q16853 763 aa8.67□□□□□ -1.02
CTNNA1-214ENST00000519116 NBPF10Q6P3W6 841 aaKnown RBP8.67□□□□□ -1.02
CTNNA1-214ENST00000519116 CTU1Q7Z7A3 348 aaKnown RBP8.67□□□□□ -1.02
CTNNA1-214ENST00000519116 NUTM1Q86Y26 1132 aa8.67□□□□□ -1.02
CTNNA1-214ENST00000519116 NBPF15Q8N660 670 aa8.67□□□□□ -1.02
CTNNA1-214ENST00000519116 SUPT20HQ8NEM7 779 aa8.67□□□□□ -1.02
CTNNA1-214ENST00000519116 CCDC102AQ96A19 550 aa8.67□□□□□ -1.02
CTNNA1-214ENST00000519116 ABCC12Q96J65 1359 aa8.67□□□□□ -1.02
CTNNA1-214ENST00000519116 ZIC5Q96T25 663 aa8.67□□□□□ -1.02
CTNNA1-214ENST00000519116 BCL2L13Q9BXK5 485 aa8.67□□□□□ -1.02
CTNNA1-214ENST00000519116 COL4A5P29400 1685 aa8.66□□□□□ -1.02
CTNNA1-214ENST00000519116 PRAMEF22A3QJZ6 481 aa8.66□□□□□ -1.02
CTNNA1-214ENST00000519116 ERVV-1B6SEH8 477 aa8.66□□□□□ -1.02
CTNNA1-214ENST00000519116 H7C1D1 291 aa8.66□□□□□ -1.02
CTNNA1-214ENST00000519116 U2SURPO15042 1029 aaKnown RBP8.66□□□□□ -1.02
CTNNA1-214ENST00000519116 TNIP1Q15025 636 aa8.66□□□□□ -1.02
CTNNA1-214ENST00000519116 RGMBQ6NW40 437 aa8.66□□□□□ -1.02
CTNNA1-214ENST00000519116 USP48Q86UV5 1035 aa8.66□□□□□ -1.02
CTNNA1-214ENST00000519116 RNF186Q9NXI6 227 aa8.66□□□□□ -1.02
CTNNA1-214ENST00000519116 UBR2Q8IWV8 1755 aa8.66□□□□□ -1.02
CTNNA1-214ENST00000519116 ARFGEF2Q9Y6D5 1785 aa8.66□□□□□ -1.02
CTNNA1-214ENST00000519116 RIC1Q4ADV7 1423 aa8.65□□□□□ -1.02
CTNNA1-214ENST00000519116 IBTKQ9P2D0 1353 aaPredicted RBP8.65□□□□□ -1.02
CTNNA1-214ENST00000519116 FAM155AB1AL88 458 aaPredicted RBP8.65□□□□□ -1.02
CTNNA1-214ENST00000519116 TCERG1O14776 1098 aaKnown RBP8.65□□□□□ -1.02
CTNNA1-214ENST00000519116 TRPA1O75762 1119 aa8.65□□□□□ -1.02
CTNNA1-214ENST00000519116 HSPA5P11021 654 aaKnown RBP8.65□□□□□ -1.02
CTNNA1-214ENST00000519116 PLCG2P16885 1265 aa8.65□□□□□ -1.02
CTNNA1-214ENST00000519116 HIRAP54198 1017 aaPredicted RBP8.65□□□□□ -1.02
CTNNA1-214ENST00000519116 KIF23Q02241 960 aaPredicted RBP8.65□□□□□ -1.02
CTNNA1-214ENST00000519116 PKN2Q16513 984 aaKnown RBP8.65□□□□□ -1.02
CTNNA1-214ENST00000519116 C2orf69Q8N8R5 385 aa8.65□□□□□ -1.02
CTNNA1-214ENST00000519116 TRPM4Q8TD43 1214 aa8.65□□□□□ -1.02
CTNNA1-214ENST00000519116 RTFDC1Q9BY42 306 aaPredicted RBP8.65□□□□□ -1.02
CTNNA1-214ENST00000519116 GBA2Q9HCG7 927 aaPredicted RBP8.65□□□□□ -1.02
CTNNA1-214ENST00000519116 ATP6V0A2Q9Y487 856 aa8.65□□□□□ -1.02
CTNNA1-214ENST00000519116 RAD17O75943 681 aa8.64□□□□□ -1.03
CTNNA1-214ENST00000519116 CHRM1P11229 460 aaPredicted RBP8.64□□□□□ -1.03
CTNNA1-214ENST00000519116 ZNF157P51786 506 aaPredicted RBP8.64□□□□□ -1.03
CTNNA1-214ENST00000519116 KIAA2012Q0VF49 1180 aa8.64□□□□□ -1.03
CTNNA1-214ENST00000519116 DPP8Q6V1X1 898 aaPredicted RBP8.64□□□□□ -1.03
CTNNA1-214ENST00000519116 KIF6Q6ZMV9 814 aa8.64□□□□□ -1.03
CTNNA1-214ENST00000519116 RTF1Q92541 710 aaKnown RBP8.64□□□□□ -1.03
CTNNA1-214ENST00000519116 OCEL1Q9H607 264 aa8.64□□□□□ -1.03
CTNNA1-214ENST00000519116 CNOT7Q9UIV1 285 aaKnown RBP8.64□□□□□ -1.03
CTNNA1-214ENST00000519116 HPS5Q9UPZ3 1129 aa8.64□□□□□ -1.03
CTNNA1-214ENST00000519116 MAP3K15Q6ZN16 1313 aa8.63□□□□□ -1.03
CTNNA1-214ENST00000519116 TNRC18O15417 2968 aaPredicted RBP8.63□□□□□ -1.03
CTNNA1-214ENST00000519116 KRT26Q7Z3Y9 468 aa8.63□□□□□ -1.03
CTNNA1-214ENST00000519116 MICALL2Q8IY33 904 aa8.63□□□□□ -1.03
CTNNA1-214ENST00000519116 SLAIN1Q8ND83 568 aa8.63□□□□□ -1.03
CTNNA1-214ENST00000519116 DPF2Q92785 391 aa8.63□□□□□ -1.03
CTNNA1-214ENST00000519116 NLRP3Q96P20 1036 aa8.63□□□□□ -1.03
CTNNA1-214ENST00000519116 UBN2Q6ZU65 1347 aa8.62□□□□□ -1.03
CTNNA1-214ENST00000519116 BBOX1O75936 387 aa8.62□□□□□ -1.03
CTNNA1-214ENST00000519116 SLC10A3P09131 477 aa8.62□□□□□ -1.03
CTNNA1-214ENST00000519116 GPTP24298 496 aa8.62□□□□□ -1.03
CTNNA1-214ENST00000519116 SUSD4Q5VX71 490 aa8.62□□□□□ -1.03
CTNNA1-214ENST00000519116 PPP1R42Q7Z4L9 355 aa8.62□□□□□ -1.03
CTNNA1-214ENST00000519116 SLC51AQ86UW1 340 aa8.62□□□□□ -1.03
CTNNA1-214ENST00000519116 SP8Q8IXZ3 490 aa8.62□□□□□ -1.03
CTNNA1-214ENST00000519116 MPNDQ8N594 471 aa8.62□□□□□ -1.03
CTNNA1-214ENST00000519116 NGEFQ8N5V2 710 aa8.62□□□□□ -1.03
CTNNA1-214ENST00000519116 PDCD7Q8N8D1 485 aaKnown RBP8.62□□□□□ -1.03
CTNNA1-214ENST00000519116 DCPSQ96C86 337 aaKnown RBP8.62□□□□□ -1.03
CTNNA1-214ENST00000519116 PHACTR3Q96KR7 559 aa8.62□□□□□ -1.03
CTNNA1-214ENST00000519116 CSRNP1Q96S65 589 aa8.62□□□□□ -1.03
CTNNA1-214ENST00000519116 BCORQ6W2J9 1755 aa8.62□□□□□ -1.03
CTNNA1-214ENST00000519116 HTATSF1O43719 755 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-214ENST00000519116 ST18O60284 1047 aa8.61□□□□□ -1.03
CTNNA1-214ENST00000519116 NTSR2O95665 410 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms