RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 RNF123Q5XPI4 1314 aa16.39■□□□□ 0.21
PABPC1-205ENST00000518196 IBTKQ9P2D0 1353 aaPredicted RBP16.38■□□□□ 0.21
PABPC1-205ENST00000518196 GCKRQ14397 625 aa16.38■□□□□ 0.21
PABPC1-205ENST00000518196 PDE3AQ14432 1141 aa16.38■□□□□ 0.21
PABPC1-205ENST00000518196 CNBD1Q8NA66 436 aa16.38■□□□□ 0.21
PABPC1-205ENST00000518196 C9orf78Q9NZ63 289 aaPredicted RBP16.38■□□□□ 0.21
PABPC1-205ENST00000518196 N4BP2Q86UW6 1770 aaPredicted RBP16.37■□□□□ 0.21
PABPC1-205ENST00000518196 HAX1O00165 279 aa16.37■□□□□ 0.21
PABPC1-205ENST00000518196 NTSR2O95665 410 aa16.37■□□□□ 0.21
PABPC1-205ENST00000518196 PCCAP05165 728 aaPredicted RBP16.37■□□□□ 0.21
PABPC1-205ENST00000518196 ST5P78524 1137 aa16.37■□□□□ 0.21
PABPC1-205ENST00000518196 TMEM57Q8N5G2 664 aa16.37■□□□□ 0.21
PABPC1-205ENST00000518196 ZBTB38Q8NAP3 1195 aaPredicted RBP16.37■□□□□ 0.21
PABPC1-205ENST00000518196 SH3TC1Q8TE82 1336 aa16.37■□□□□ 0.21
PABPC1-205ENST00000518196 HSP90B1P14625 803 aaKnown RBP16.36■□□□□ 0.21
PABPC1-205ENST00000518196 PTGER2P43116 358 aa16.36■□□□□ 0.21
PABPC1-205ENST00000518196 PRR5LQ6MZQ0 368 aa16.36■□□□□ 0.21
PABPC1-205ENST00000518196 PANK1Q8TE04 598 aa16.36■□□□□ 0.21
PABPC1-205ENST00000518196 NRXN2Q9P2S2 1712 aa16.36■□□□□ 0.21
PABPC1-205ENST00000518196 GRM8O00222 908 aa16.35■□□□□ 0.21
PABPC1-205ENST00000518196 RLBP1P12271 317 aa16.35■□□□□ 0.21
PABPC1-205ENST00000518196 NUTM1Q86Y26 1132 aa16.35■□□□□ 0.21
PABPC1-205ENST00000518196 ITPRIPQ8IWB1 547 aa16.35■□□□□ 0.21
PABPC1-205ENST00000518196 FAM89AQ96GI7 184 aa16.35■□□□□ 0.21
PABPC1-205ENST00000518196 TSHZ2Q9NRE2 1034 aa16.35■□□□□ 0.21
PABPC1-205ENST00000518196 H7C1W4 665 aa16.34■□□□□ 0.21
PABPC1-205ENST00000518196 ERFEQ4G0M1 354 aa16.34■□□□□ 0.21
PABPC1-205ENST00000518196 RTL5Q5HYW3 569 aaPredicted RBP16.34■□□□□ 0.21
PABPC1-205ENST00000518196 PPP1R1BQ9UD71 204 aaPredicted RBP16.34■□□□□ 0.21
PABPC1-205ENST00000518196 HDAC5Q9UQL6 1122 aa16.34■□□□□ 0.21
PABPC1-205ENST00000518196 IRS4O14654 1257 aaPredicted RBP16.33■□□□□ 0.2
PABPC1-205ENST00000518196 GTPBP6O43824 516 aaPredicted RBP16.33■□□□□ 0.2
PABPC1-205ENST00000518196 SLC10A5Q5PT55 438 aa16.33■□□□□ 0.2
PABPC1-205ENST00000518196 UBE3BQ7Z3V4 1068 aa16.33■□□□□ 0.2
PABPC1-205ENST00000518196 JARID2Q92833 1246 aaPredicted RBP16.33■□□□□ 0.2
PABPC1-205ENST00000518196 CHMP4BQ9H444 224 aaKnown RBP16.33■□□□□ 0.2
PABPC1-205ENST00000518196 CDHR2Q9BYE9 1310 aa16.33■□□□□ 0.2
PABPC1-205ENST00000518196 GNAI3P08754 354 aa16.32■□□□□ 0.2
PABPC1-205ENST00000518196 MVPQ14764 893 aaKnown RBP16.32■□□□□ 0.2
PABPC1-205ENST00000518196 C20orf194Q5TEA3 1177 aa16.32■□□□□ 0.2
PABPC1-205ENST00000518196 SYNE4Q8N205 404 aa16.32■□□□□ 0.2
PABPC1-205ENST00000518196 CCDC24Q8N4L8 307 aa16.32■□□□□ 0.2
PABPC1-205ENST00000518196 BRIP1Q9BX63 1249 aa16.32■□□□□ 0.2
PABPC1-205ENST00000518196 USP44Q9H0E7 712 aa16.32■□□□□ 0.2
PABPC1-205ENST00000518196 DDX19BQ9UMR2 479 aa16.32■□□□□ 0.2
PABPC1-205ENST00000518196 COG6Q9Y2V7 657 aa16.32■□□□□ 0.2
PABPC1-205ENST00000518196 UTYO14607 1347 aa16.31■□□□□ 0.2
PABPC1-205ENST00000518196 PDE8AO60658 829 aa16.31■□□□□ 0.2
PABPC1-205ENST00000518196 UBTFL1P0CB47 393 aaPredicted RBP16.31■□□□□ 0.2
PABPC1-205ENST00000518196 PDE6BP35913 854 aa16.31■□□□□ 0.2
PABPC1-205ENST00000518196 MS4A3Q96HJ5 214 aa16.31■□□□□ 0.2
PABPC1-205ENST00000518196 NLRP3Q96P20 1036 aa16.31■□□□□ 0.2
PABPC1-205ENST00000518196 PDZRN3Q9UPQ7 1066 aa16.31■□□□□ 0.2
PABPC1-205ENST00000518196 NBPF7P0C2Y1 421 aaPredicted RBP16.3■□□□□ 0.2
PABPC1-205ENST00000518196 HCLS1P14317 486 aaPredicted RBP16.3■□□□□ 0.2
PABPC1-205ENST00000518196 CASP7P55210 303 aa16.3■□□□□ 0.2
PABPC1-205ENST00000518196 RIC1Q4ADV7 1423 aa16.29■□□□□ 0.2
PABPC1-205ENST00000518196 C10orf71Q711Q0 1435 aa16.29■□□□□ 0.2
PABPC1-205ENST00000518196 ABCC12Q96J65 1359 aa16.29■□□□□ 0.2
PABPC1-205ENST00000518196 MEIS3Q99687 375 aa16.29■□□□□ 0.2
PABPC1-205ENST00000518196 PLA2G12BQ9BX93 195 aa16.29■□□□□ 0.2
PABPC1-205ENST00000518196 CD2APQ9Y5K6 639 aa16.29■□□□□ 0.2
PABPC1-205ENST00000518196 MYH3P11055 1940 aa16.28■□□□□ 0.2
PABPC1-205ENST00000518196 ZBTB7BO15156 539 aaPredicted RBP16.28■□□□□ 0.2
PABPC1-205ENST00000518196 ANKRD31Q8N7Z5 1873 aa16.28■□□□□ 0.2
PABPC1-205ENST00000518196 KIF13BQ9NQT8 1826 aa16.28■□□□□ 0.2
PABPC1-205ENST00000518196 LAMB2P55268 1798 aa16.28■□□□□ 0.2
PABPC1-205ENST00000518196 DDX60Q8IY21 1712 aaKnown RBP16.28■□□□□ 0.2
PABPC1-205ENST00000518196 LRP5O75197 1615 aa16.27■□□□□ 0.2
PABPC1-205ENST00000518196 H0YIN7 160 aa16.27■□□□□ 0.2
PABPC1-205ENST00000518196 TGFB2P61812 414 aa16.27■□□□□ 0.2
PABPC1-205ENST00000518196 EVX2Q03828 476 aa16.27■□□□□ 0.2
PABPC1-205ENST00000518196 SUCLG2Q96I99 432 aa16.27■□□□□ 0.2
PABPC1-205ENST00000518196 KLRG2A4D1S0 409 aaPredicted RBP16.26■□□□□ 0.19
PABPC1-205ENST00000518196 GNAI2P04899 355 aa16.26■□□□□ 0.19
PABPC1-205ENST00000518196 CTSWP56202 376 aa16.26■□□□□ 0.19
PABPC1-205ENST00000518196 SF3B3Q15393 1217 aaKnown RBP16.26■□□□□ 0.19
PABPC1-205ENST00000518196 CCDC152Q4G0S7 254 aa16.26■□□□□ 0.19
PABPC1-205ENST00000518196 C2CD5Q86YS7 1000 aa16.26■□□□□ 0.19
PABPC1-205ENST00000518196 RPGRQ92834 1020 aaKnown RBP16.26■□□□□ 0.19
PABPC1-205ENST00000518196 TRPC6Q9Y210 931 aa16.26■□□□□ 0.19
PABPC1-205ENST00000518196 CRBNQ96SW2 442 aa16.25■□□□□ 0.19
PABPC1-205ENST00000518196 FHDC1Q9C0D6 1143 aaPredicted RBP16.25■□□□□ 0.19
PABPC1-205ENST00000518196 LRRFIP2Q9Y608 721 aaKnown RBP16.25■□□□□ 0.19
PABPC1-205ENST00000518196 NPR1P16066 1061 aa16.24■□□□□ 0.19
PABPC1-205ENST00000518196 FOXO4P98177 505 aa16.24■□□□□ 0.19
PABPC1-205ENST00000518196 CRY2Q49AN0 593 aa16.24■□□□□ 0.19
PABPC1-205ENST00000518196 C3orf67Q6ZVT6 689 aa16.24■□□□□ 0.19
PABPC1-205ENST00000518196 DDX46Q7L014 1031 aaKnown RBP16.24■□□□□ 0.19
PABPC1-205ENST00000518196 TTLL11Q8NHH1 800 aa16.24■□□□□ 0.19
PABPC1-205ENST00000518196 MASTLQ96GX5 879 aa16.24■□□□□ 0.19
PABPC1-205ENST00000518196 RBM17Q96I25 401 aaKnown RBP16.24■□□□□ 0.19
PABPC1-205ENST00000518196 BICC1Q9H694 974 aaKnown RBP16.24■□□□□ 0.19
PABPC1-205ENST00000518196 CHMP3Q9Y3E7 222 aa16.24■□□□□ 0.19
PABPC1-205ENST00000518196 TNRC6CQ9HCJ0 1690 aaKnown RBP16.24■□□□□ 0.19
PABPC1-205ENST00000518196 CSF1RP07333 972 aa16.23■□□□□ 0.19
PABPC1-205ENST00000518196 SRGNP10124 158 aa16.23■□□□□ 0.19
PABPC1-205ENST00000518196 DPEP1P16444 411 aa16.23■□□□□ 0.19
PABPC1-205ENST00000518196 EPHA10Q5JZY3 1008 aa16.23■□□□□ 0.19
PABPC1-205ENST00000518196 LMBR1LQ6UX01 489 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms