RNA–Protein interactions for RNA: ENST00000517955.2

ARFGEF1-202, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-202ENST00000517955 NBPF5PQ86XG9 351 aaPredicted RBP14.34□□□□□ -0.11
ARFGEF1-202ENST00000517955 RPAP2Q8IXW5 612 aaPredicted RBP14.34□□□□□ -0.11
ARFGEF1-202ENST00000517955 FAM89AQ96GI7 184 aa14.34□□□□□ -0.11
ARFGEF1-202ENST00000517955 LAMB2P55268 1798 aa14.33□□□□□ -0.12
ARFGEF1-202ENST00000517955 MMP10P09238 476 aa14.33□□□□□ -0.12
ARFGEF1-202ENST00000517955 PLCD3Q8N3E9 789 aa14.33□□□□□ -0.12
ARFGEF1-202ENST00000517955 PARP3Q9Y6F1 533 aa14.33□□□□□ -0.12
ARFGEF1-202ENST00000517955 KLRG2A4D1S0 409 aaPredicted RBP14.32□□□□□ -0.12
ARFGEF1-202ENST00000517955 IRS4O14654 1257 aaPredicted RBP14.32□□□□□ -0.12
ARFGEF1-202ENST00000517955 PDE8AO60658 829 aa14.32□□□□□ -0.12
ARFGEF1-202ENST00000517955 CSF1RP07333 972 aa14.32□□□□□ -0.12
ARFGEF1-202ENST00000517955 FOXO4P98177 505 aa14.32□□□□□ -0.12
ARFGEF1-202ENST00000517955 PRR5LQ6MZQ0 368 aa14.32□□□□□ -0.12
ARFGEF1-202ENST00000517955 CNBD1Q8NA66 436 aa14.32□□□□□ -0.12
ARFGEF1-202ENST00000517955 SUCLG2Q96I99 432 aa14.32□□□□□ -0.12
ARFGEF1-202ENST00000517955 LRRFIP2Q9Y608 721 aaKnown RBP14.32□□□□□ -0.12
ARFGEF1-202ENST00000517955 ATP8B2P98198 1209 aa14.31□□□□□ -0.12
ARFGEF1-202ENST00000517955 ERFEQ4G0M1 354 aa14.31□□□□□ -0.12
ARFGEF1-202ENST00000517955 SYNE4Q8N205 404 aa14.31□□□□□ -0.12
ARFGEF1-202ENST00000517955 ANKRD44Q8N8A2 993 aa14.31□□□□□ -0.12
ARFGEF1-202ENST00000517955 SGIP1Q9BQI5 828 aa14.31□□□□□ -0.12
ARFGEF1-202ENST00000517955 DDX60Q8IY21 1712 aaKnown RBP14.31□□□□□ -0.12
ARFGEF1-202ENST00000517955 MYH3P11055 1940 aa14.31□□□□□ -0.12
ARFGEF1-202ENST00000517955 GTF2E1P29083 439 aaPredicted RBP14.3□□□□□ -0.12
ARFGEF1-202ENST00000517955 ST5P78524 1137 aa14.3□□□□□ -0.12
ARFGEF1-202ENST00000517955 SF3B3Q15393 1217 aaKnown RBP14.3□□□□□ -0.12
ARFGEF1-202ENST00000517955 EPHA10Q5JZY3 1008 aa14.3□□□□□ -0.12
ARFGEF1-202ENST00000517955 MSL1Q68DK7 614 aa14.3□□□□□ -0.12
ARFGEF1-202ENST00000517955 CEP85Q6P2H3 762 aa14.3□□□□□ -0.12
ARFGEF1-202ENST00000517955 NUTM1Q86Y26 1132 aa14.3□□□□□ -0.12
ARFGEF1-202ENST00000517955 BICC1Q9H694 974 aaKnown RBP14.3□□□□□ -0.12
ARFGEF1-202ENST00000517955 PCDHB15Q9Y5E8 787 aa14.3□□□□□ -0.12
ARFGEF1-202ENST00000517955 RTL9Q8NET4 1388 aa14.3□□□□□ -0.12
ARFGEF1-202ENST00000517955 CTSWP56202 376 aa14.29□□□□□ -0.12
ARFGEF1-202ENST00000517955 HDAC1Q13547 482 aaPredicted RBP14.29□□□□□ -0.12
ARFGEF1-202ENST00000517955 TTLL11Q8NHH1 800 aa14.29□□□□□ -0.12
ARFGEF1-202ENST00000517955 SSH3Q8TE77 659 aa14.29□□□□□ -0.12
ARFGEF1-202ENST00000517955 JARID2Q92833 1246 aaPredicted RBP14.29□□□□□ -0.12
ARFGEF1-202ENST00000517955 BRIP1Q9BX63 1249 aa14.29□□□□□ -0.12
ARFGEF1-202ENST00000517955 PDZRN3Q9UPQ7 1066 aa14.29□□□□□ -0.12
ARFGEF1-202ENST00000517955 PSDA5PKW4 1024 aaPredicted RBP14.28□□□□□ -0.12
ARFGEF1-202ENST00000517955 FAM177BA6PVY3 158 aa14.28□□□□□ -0.12
ARFGEF1-202ENST00000517955 ZBTB7AO95365 584 aa14.28□□□□□ -0.12
ARFGEF1-202ENST00000517955 HCLS1P14317 486 aaPredicted RBP14.28□□□□□ -0.12
ARFGEF1-202ENST00000517955 CRY2Q49AN0 593 aa14.28□□□□□ -0.12
ARFGEF1-202ENST00000517955 SIRT2Q8IXJ6 389 aa14.28□□□□□ -0.12
ARFGEF1-202ENST00000517955 ABCC12Q96J65 1359 aa14.28□□□□□ -0.12
ARFGEF1-202ENST00000517955 NLRP3Q96P20 1036 aa14.28□□□□□ -0.12
ARFGEF1-202ENST00000517955 HMMRO75330 724 aa14.27□□□□□ -0.13
ARFGEF1-202ENST00000517955 POLD1P28340 1107 aa14.27□□□□□ -0.13
ARFGEF1-202ENST00000517955 PTGER2P43116 358 aa14.27□□□□□ -0.13
ARFGEF1-202ENST00000517955 RTL5Q5HYW3 569 aaPredicted RBP14.27□□□□□ -0.13
ARFGEF1-202ENST00000517955 LMBR1LQ6UX01 489 aa14.27□□□□□ -0.13
ARFGEF1-202ENST00000517955 C1orf115Q9H7X2 142 aa14.27□□□□□ -0.13
ARFGEF1-202ENST00000517955 PPP4R2Q9NY27 417 aa14.27□□□□□ -0.13
ARFGEF1-202ENST00000517955 KIF13BQ9NQT8 1826 aa14.27□□□□□ -0.13
ARFGEF1-202ENST00000517955 PDE6BP35913 854 aa14.26□□□□□ -0.13
ARFGEF1-202ENST00000517955 CCDC152Q4G0S7 254 aa14.26□□□□□ -0.13
ARFGEF1-202ENST00000517955 C10orf71Q711Q0 1435 aa14.25□□□□□ -0.13
ARFGEF1-202ENST00000517955 ANKRD31Q8N7Z5 1873 aa14.25□□□□□ -0.13
ARFGEF1-202ENST00000517955 PNMA6EA0A0J9YXQ4 647 aa14.25□□□□□ -0.13
ARFGEF1-202ENST00000517955 NPHP1O15259 732 aa14.25□□□□□ -0.13
ARFGEF1-202ENST00000517955 SRGAP3O43295 1099 aa14.25□□□□□ -0.13
ARFGEF1-202ENST00000517955 HOXA10P31260 410 aaPredicted RBP14.25□□□□□ -0.13
ARFGEF1-202ENST00000517955 RFX5P48382 616 aaPredicted RBP14.25□□□□□ -0.13
ARFGEF1-202ENST00000517955 RWDD1Q9H446 243 aaPredicted RBP14.25□□□□□ -0.13
ARFGEF1-202ENST00000517955 SPON1Q9HCB6 807 aa14.25□□□□□ -0.13
ARFGEF1-202ENST00000517955 COPRSQ9NQ92 184 aa14.25□□□□□ -0.13
ARFGEF1-202ENST00000517955 NOP58Q9Y2X3 529 aaKnown RBP14.25□□□□□ -0.13
ARFGEF1-202ENST00000517955 ZBTB47Q9UFB7 747 aaPredicted RBP14.24□□□□□ -0.13
ARFGEF1-202ENST00000517955 TNRC6CQ9HCJ0 1690 aaKnown RBP14.23□□□□□ -0.13
ARFGEF1-202ENST00000517955 PTPN12Q05209 780 aaKnown RBP14.23□□□□□ -0.13
ARFGEF1-202ENST00000517955 IFIT5Q13325 482 aaKnown RBP14.23□□□□□ -0.13
ARFGEF1-202ENST00000517955 CCDC57Q2TAC2 916 aa14.23□□□□□ -0.13
ARFGEF1-202ENST00000517955 C3orf67Q6ZVT6 689 aa14.23□□□□□ -0.13
ARFGEF1-202ENST00000517955 GREM2Q9H772 168 aa14.23□□□□□ -0.13
ARFGEF1-202ENST00000517955 DCTPP1Q9H773 170 aa14.23□□□□□ -0.13
ARFGEF1-202ENST00000517955 SRCAPQ6ZRS2 3230 aa14.22□□□□□ -0.13
ARFGEF1-202ENST00000517955 ANKRD18BA2A2Z9 1011 aa14.22□□□□□ -0.13
ARFGEF1-202ENST00000517955 SRGNP10124 158 aa14.22□□□□□ -0.13
ARFGEF1-202ENST00000517955 ITGA6P23229 1130 aa14.22□□□□□ -0.13
ARFGEF1-202ENST00000517955 CLCN6P51797 869 aa14.22□□□□□ -0.13
ARFGEF1-202ENST00000517955 TGFB2P61812 414 aa14.22□□□□□ -0.13
ARFGEF1-202ENST00000517955 FAM161AQ3B820 660 aa14.22□□□□□ -0.13
ARFGEF1-202ENST00000517955 CRAMP1Q96RY5 1269 aa14.22□□□□□ -0.13
ARFGEF1-202ENST00000517955 CD2APQ9Y5K6 639 aa14.22□□□□□ -0.13
ARFGEF1-202ENST00000517955 GABBR2O75899 941 aa14.21□□□□□ -0.13
ARFGEF1-202ENST00000517955 CIAO1O76071 339 aa14.21□□□□□ -0.13
ARFGEF1-202ENST00000517955 IGHDP01880 384 aa14.21□□□□□ -0.13
ARFGEF1-202ENST00000517955 NPR1P16066 1061 aa14.21□□□□□ -0.13
ARFGEF1-202ENST00000517955 HSP90AB4PQ58FF6 505 aa14.21□□□□□ -0.13
ARFGEF1-202ENST00000517955 SMC5Q8IY18 1101 aa14.21□□□□□ -0.13
ARFGEF1-202ENST00000517955 CCDC24Q8N4L8 307 aa14.21□□□□□ -0.13
ARFGEF1-202ENST00000517955 ZNF579Q8NAF0 562 aaKnown RBP14.21□□□□□ -0.13
ARFGEF1-202ENST00000517955 GCC1Q96CN9 775 aa14.21□□□□□ -0.13
ARFGEF1-202ENST00000517955 CDC5LQ99459 802 aaKnown RBP14.21□□□□□ -0.13
ARFGEF1-202ENST00000517955 GTF3C3Q9Y5Q9 886 aa14.21□□□□□ -0.13
ARFGEF1-202ENST00000517955 KDM2BQ8NHM5 1336 aa14.2□□□□□ -0.14
ARFGEF1-202ENST00000517955 VASPP50552 380 aaPredicted RBP14.2□□□□□ -0.14
ARFGEF1-202ENST00000517955 STYK1Q6J9G0 422 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms