RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 C1QTNF3-AMACRE9PGA6 284 aa0.83□□□□□ -2.28
SNORA40.16-201ENST00000517238 DLL1O00548 723 aa0.83□□□□□ -2.28
SNORA40.16-201ENST00000517238 HOXA2O43364 376 aa0.83□□□□□ -2.28
SNORA40.16-201ENST00000517238 F13BP05160 661 aa0.83□□□□□ -2.28
SNORA40.16-201ENST00000517238 USP46P62068 366 aa0.83□□□□□ -2.28
SNORA40.16-201ENST00000517238 FAM20CQ8IXL6 584 aa0.83□□□□□ -2.28
SNORA40.16-201ENST00000517238 SLC10A4Q96EP9 437 aa0.83□□□□□ -2.28
SNORA40.16-201ENST00000517238 RYDENQ9NUL5 291 aaKnown RBP0.83□□□□□ -2.28
SNORA40.16-201ENST00000517238 MAP10Q9P2G4 905 aa0.83□□□□□ -2.28
SNORA40.16-201ENST00000517238 CDV3Q9UKY7 258 aaKnown RBP0.83□□□□□ -2.28
SNORA40.16-201ENST00000517238 CNOT11Q9UKZ1 510 aaKnown RBP0.83□□□□□ -2.28
SNORA40.16-201ENST00000517238 DEAF1O75398 565 aaPredicted RBP0.82□□□□□ -2.28
SNORA40.16-201ENST00000517238 GLI1P08151 1106 aa0.82□□□□□ -2.28
SNORA40.16-201ENST00000517238 KRTAP10-12P60413 245 aa0.82□□□□□ -2.28
SNORA40.16-201ENST00000517238 PURAQ00577 322 aaKnown RBP0.82□□□□□ -2.28
SNORA40.16-201ENST00000517238 ILDR2Q71H61 639 aa0.82□□□□□ -2.28
SNORA40.16-201ENST00000517238 NLRP8Q86W28 1048 aa0.82□□□□□ -2.28
SNORA40.16-201ENST00000517238 WFDC3Q8IUB2 231 aa0.82□□□□□ -2.28
SNORA40.16-201ENST00000517238 STK11IPQ8N1F8 1099 aa0.82□□□□□ -2.28
SNORA40.16-201ENST00000517238 NLRP7Q8WX94 980 aa0.82□□□□□ -2.28
SNORA40.16-201ENST00000517238 KCNN1Q92952 543 aa0.82□□□□□ -2.28
SNORA40.16-201ENST00000517238 KCNK12Q9HB15 430 aa0.82□□□□□ -2.28
SNORA40.16-201ENST00000517238 DCP1AQ9NPI6 582 aaPredicted RBP0.82□□□□□ -2.28
SNORA40.16-201ENST00000517238 SEMA3GQ9NS98 782 aa0.82□□□□□ -2.28
SNORA40.16-201ENST00000517238 HS3ST3A1Q9Y663 406 aa0.82□□□□□ -2.28
SNORA40.16-201ENST00000517238 WDR33Q9C0J8 1336 aaKnown RBP0.82□□□□□ -2.28
SNORA40.16-201ENST00000517238 SOCS7O14512 581 aa0.81□□□□□ -2.28
SNORA40.16-201ENST00000517238 BMP3P12645 472 aa0.81□□□□□ -2.28
SNORA40.16-201ENST00000517238 KRTAP10-5P60370 271 aa0.81□□□□□ -2.28
SNORA40.16-201ENST00000517238 TBC1D8BQ0IIM8 1120 aa0.81□□□□□ -2.28
SNORA40.16-201ENST00000517238 RTP5Q14D33 572 aa0.81□□□□□ -2.28
SNORA40.16-201ENST00000517238 KRTAP27-1Q3LI81 207 aa0.81□□□□□ -2.28
SNORA40.16-201ENST00000517238 CPZQ66K79 652 aa0.81□□□□□ -2.28
SNORA40.16-201ENST00000517238 WFDC8Q8IUA0 241 aa0.81□□□□□ -2.28
SNORA40.16-201ENST00000517238 WASF1Q92558 559 aa0.81□□□□□ -2.28
SNORA40.16-201ENST00000517238 EPB41L4BQ9H329 900 aa0.81□□□□□ -2.28
SNORA40.16-201ENST00000517238 CYLDQ9NQC7 956 aa0.81□□□□□ -2.28
SNORA40.16-201ENST00000517238 SMPD4Q9NXE4 827 aa0.81□□□□□ -2.28
SNORA40.16-201ENST00000517238 ZC3H7BQ9UGR2 993 aaKnown RBP0.81□□□□□ -2.28
SNORA40.16-201ENST00000517238 RGS9O75916 674 aaPredicted RBP0.8□□□□□ -2.28
SNORA40.16-201ENST00000517238 GTF2E1P29083 439 aaPredicted RBP0.8□□□□□ -2.28
SNORA40.16-201ENST00000517238 NEUROD1Q13562 356 aa0.8□□□□□ -2.28
SNORA40.16-201ENST00000517238 FHL2Q14192 279 aa0.8□□□□□ -2.28
SNORA40.16-201ENST00000517238 GNASQ5JWF2 1037 aa0.8□□□□□ -2.28
SNORA40.16-201ENST00000517238 LCE3AQ5TA76 89 aa0.8□□□□□ -2.28
SNORA40.16-201ENST00000517238 PSAPL1Q6NUJ1 521 aa0.8□□□□□ -2.28
SNORA40.16-201ENST00000517238 SH3BP5LQ7L8J4 393 aa0.8□□□□□ -2.28
SNORA40.16-201ENST00000517238 TMEM151BQ8IW70 566 aa0.8□□□□□ -2.28
SNORA40.16-201ENST00000517238 CHFRQ96EP1 664 aa0.8□□□□□ -2.28
SNORA40.16-201ENST00000517238 FAM46AQ96IP4 442 aaKnown RBP0.8□□□□□ -2.28
SNORA40.16-201ENST00000517238 LRRC4CQ9HCJ2 640 aa0.8□□□□□ -2.28
SNORA40.16-201ENST00000517238 ERVH48-1M5A8F1 160 aa0.79□□□□□ -2.28
SNORA40.16-201ENST00000517238 FAM157BP0CG42 384 aa0.79□□□□□ -2.28
SNORA40.16-201ENST00000517238 CD8BP10966 210 aa0.79□□□□□ -2.28
SNORA40.16-201ENST00000517238 BNIP3Q12983 259 aa0.79□□□□□ -2.28
SNORA40.16-201ENST00000517238 CLN3Q13286 438 aa0.79□□□□□ -2.28
SNORA40.16-201ENST00000517238 FKBP8Q14318 412 aa0.79□□□□□ -2.28
SNORA40.16-201ENST00000517238 ZNF385BQ569K4 471 aa0.79□□□□□ -2.28
SNORA40.16-201ENST00000517238 TMEM67Q5HYA8 995 aa0.79□□□□□ -2.28
SNORA40.16-201ENST00000517238 ZC3HAV1Q7Z2W4 902 aaKnown RBP0.79□□□□□ -2.28
SNORA40.16-201ENST00000517238 SPRED1Q7Z699 444 aa0.79□□□□□ -2.28
SNORA40.16-201ENST00000517238 FRMD5Q7Z6J6 570 aa0.79□□□□□ -2.28
SNORA40.16-201ENST00000517238 SP8Q8IXZ3 490 aa0.79□□□□□ -2.28
SNORA40.16-201ENST00000517238 SYT8Q8NBV8 401 aa0.79□□□□□ -2.28
SNORA40.16-201ENST00000517238 PRR7Q8TB68 274 aa0.79□□□□□ -2.28
SNORA40.16-201ENST00000517238 BAHD1Q8TBE0 780 aaPredicted RBP0.79□□□□□ -2.28
SNORA40.16-201ENST00000517238 ADAM19Q9H013 955 aa0.79□□□□□ -2.28
SNORA40.16-201ENST00000517238 VPS11Q9H270 941 aa0.79□□□□□ -2.28
SNORA40.16-201ENST00000517238 CNOT6Q9ULM6 557 aaKnown RBP0.79□□□□□ -2.28
SNORA40.16-201ENST00000517238 TRIOBPQ9H2D6 2365 aa0.79□□□□□ -2.28
SNORA40.16-201ENST00000517238 RFXAPO00287 272 aa0.78□□□□□ -2.28
SNORA40.16-201ENST00000517238 PRICKLE3O43900 615 aaPredicted RBP0.78□□□□□ -2.28
SNORA40.16-201ENST00000517238 F12P00748 615 aaPredicted RBP0.78□□□□□ -2.28
SNORA40.16-201ENST00000517238 HOXB6P17509 224 aaKnown RBP0.78□□□□□ -2.28
SNORA40.16-201ENST00000517238 GRM7Q14831 915 aa0.78□□□□□ -2.28
SNORA40.16-201ENST00000517238 C4orf17Q53FE4 359 aa0.78□□□□□ -2.28
SNORA40.16-201ENST00000517238 LCE1AQ5T7P2 110 aa0.78□□□□□ -2.28
SNORA40.16-201ENST00000517238 FYB2Q5VWT5 728 aa0.78□□□□□ -2.28
SNORA40.16-201ENST00000517238 PAPD7Q5XG87 772 aaKnown RBP0.78□□□□□ -2.28
SNORA40.16-201ENST00000517238 ZKSCAN2Q63HK3 967 aa0.78□□□□□ -2.28
SNORA40.16-201ENST00000517238 DESI1Q6ICB0 168 aa0.78□□□□□ -2.28
SNORA40.16-201ENST00000517238 RAB44Q7Z6P3 723 aaPredicted RBP0.78□□□□□ -2.28
SNORA40.16-201ENST00000517238 ARMC2Q8NEN0 867 aa0.78□□□□□ -2.28
SNORA40.16-201ENST00000517238 ZG16BQ96DA0 208 aa0.78□□□□□ -2.28
SNORA40.16-201ENST00000517238 SLC26A8Q96RN1 970 aa0.78□□□□□ -2.28
SNORA40.16-201ENST00000517238 UBE2OQ9C0C9 1292 aaKnown RBP0.78□□□□□ -2.28
SNORA40.16-201ENST00000517238 DNAJC5Q9H3Z4 198 aa0.78□□□□□ -2.28
SNORA40.16-201ENST00000517238 SLC6A14Q9UN76 642 aa0.78□□□□□ -2.28
SNORA40.16-201ENST00000517238 SART1O43290 800 aaKnown RBP0.77□□□□□ -2.29
SNORA40.16-201ENST00000517238 ECM2O94769 699 aaPredicted RBP0.77□□□□□ -2.29
SNORA40.16-201ENST00000517238 ZNF20P17024 532 aa0.77□□□□□ -2.29
SNORA40.16-201ENST00000517238 AFMP43652 599 aa0.77□□□□□ -2.29
SNORA40.16-201ENST00000517238 CCDC142Q17RM4 750 aa0.77□□□□□ -2.29
SNORA40.16-201ENST00000517238 TMEM259Q4ZIN3 620 aa0.77□□□□□ -2.29
SNORA40.16-201ENST00000517238 FBXO31Q5XUX0 539 aaPredicted RBP0.77□□□□□ -2.29
SNORA40.16-201ENST00000517238 TMEM214Q6NUQ4 689 aaKnown RBP0.77□□□□□ -2.29
SNORA40.16-201ENST00000517238 PPP1R3FQ6ZSY5 799 aaPredicted RBP0.77□□□□□ -2.29
SNORA40.16-201ENST00000517238 TBC1D9Q6ZT07 1266 aa0.77□□□□□ -2.29
SNORA40.16-201ENST00000517238 CEP89Q96ST8 783 aa0.77□□□□□ -2.29
SNORA40.16-201ENST00000517238 IGFLR1Q9H665 355 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms