RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 HMX1Q9NP08 348 aaPredicted RBP7.57□□□□□ -1.2
SCARNA6.1-201ENST00000516989 MIS18AQ9NYP9 233 aa7.57□□□□□ -1.2
SCARNA6.1-201ENST00000516989 CCNL1Q9UK58 526 aaPredicted RBP7.57□□□□□ -1.2
SCARNA6.1-201ENST00000516989 KDM6AO15550 1401 aaPredicted RBP7.57□□□□□ -1.2
SCARNA6.1-201ENST00000516989 ATP6V1AP38606 617 aa7.56□□□□□ -1.2
SCARNA6.1-201ENST00000516989 WASHC4Q2M389 1173 aa7.56□□□□□ -1.2
SCARNA6.1-201ENST00000516989 TSC1Q92574 1164 aa7.56□□□□□ -1.2
SCARNA6.1-201ENST00000516989 TRIM34Q9BYJ4 488 aa7.56□□□□□ -1.2
SCARNA6.1-201ENST00000516989 SEPT9Q9UHD8 586 aaPredicted RBP7.56□□□□□ -1.2
SCARNA6.1-201ENST00000516989 PKD1L3Q7Z443 1732 aa7.55□□□□□ -1.2
SCARNA6.1-201ENST00000516989 LOC102724428A0A0B4J2F2 783 aa7.55□□□□□ -1.2
SCARNA6.1-201ENST00000516989 KCNQ3O43525 872 aa7.55□□□□□ -1.2
SCARNA6.1-201ENST00000516989 SIK1P57059 783 aa7.55□□□□□ -1.2
SCARNA6.1-201ENST00000516989 GRIPAP1Q4V328 841 aa7.55□□□□□ -1.2
SCARNA6.1-201ENST00000516989 SLC27A3Q5K4L6 730 aa7.55□□□□□ -1.2
SCARNA6.1-201ENST00000516989 HELBQ8NG08 1087 aaPredicted RBP7.55□□□□□ -1.2
SCARNA6.1-201ENST00000516989 ADAMTS19Q8TE59 1207 aa7.55□□□□□ -1.2
SCARNA6.1-201ENST00000516989 LRRN4Q8WUT4 740 aa7.55□□□□□ -1.2
SCARNA6.1-201ENST00000516989 RABGEF1Q9UJ41 708 aa7.55□□□□□ -1.2
SCARNA6.1-201ENST00000516989 PALLDQ8WX93 1383 aa7.55□□□□□ -1.2
SCARNA6.1-201ENST00000516989 C6orf229H3BNL8 230 aa7.54□□□□□ -1.2
SCARNA6.1-201ENST00000516989 HMGB2P26583 209 aaKnown RBP7.54□□□□□ -1.2
SCARNA6.1-201ENST00000516989 SLC4A3P48751 1232 aa7.54□□□□□ -1.2
SCARNA6.1-201ENST00000516989 ZNF790Q6PG37 636 aa7.54□□□□□ -1.2
SCARNA6.1-201ENST00000516989 LRRC4BQ9NT99 713 aa7.54□□□□□ -1.2
SCARNA6.1-201ENST00000516989 STK32BQ9NY57 414 aa7.54□□□□□ -1.2
SCARNA6.1-201ENST00000516989 TSPYL4Q9UJ04 414 aa7.54□□□□□ -1.2
SCARNA6.1-201ENST00000516989 SHANK3Q9BYB0 1731 aa7.54□□□□□ -1.2
SCARNA6.1-201ENST00000516989 CEMIPQ8WUJ3 1361 aa7.54□□□□□ -1.2
SCARNA6.1-201ENST00000516989 CFAP99D6REC4 459 aa7.53□□□□□ -1.2
SCARNA6.1-201ENST00000516989 ARHGAP33O14559 1287 aa7.53□□□□□ -1.2
SCARNA6.1-201ENST00000516989 RFX1P22670 979 aa7.53□□□□□ -1.2
SCARNA6.1-201ENST00000516989 CALD1Q05682 793 aaKnown RBP7.53□□□□□ -1.2
SCARNA6.1-201ENST00000516989 VAC14Q08AM6 782 aa7.53□□□□□ -1.2
SCARNA6.1-201ENST00000516989 FUT2Q10981 343 aa7.53□□□□□ -1.2
SCARNA6.1-201ENST00000516989 DNAJC10Q8IXB1 793 aa7.53□□□□□ -1.2
SCARNA6.1-201ENST00000516989 ZNF496Q96IT1 587 aaPredicted RBP7.53□□□□□ -1.2
SCARNA6.1-201ENST00000516989 FMNL2Q96PY5 1086 aa7.53□□□□□ -1.2
SCARNA6.1-201ENST00000516989 SLC4A9Q96Q91 983 aa7.53□□□□□ -1.2
SCARNA6.1-201ENST00000516989 DOT1LQ8TEK3 1739 aa7.52□□□□□ -1.2
SCARNA6.1-201ENST00000516989 GPR37L1O60883 481 aa7.52□□□□□ -1.21
SCARNA6.1-201ENST00000516989 GNAI1P63096 354 aa7.52□□□□□ -1.21
SCARNA6.1-201ENST00000516989 PDE4CQ08493 712 aa7.52□□□□□ -1.21
SCARNA6.1-201ENST00000516989 ITPK1Q13572 414 aa7.52□□□□□ -1.21
SCARNA6.1-201ENST00000516989 R3HDM1Q15032 1099 aaKnown RBP7.52□□□□□ -1.21
SCARNA6.1-201ENST00000516989 CCDC27Q2M243 656 aa7.52□□□□□ -1.21
SCARNA6.1-201ENST00000516989 SLF2Q8IX21 1173 aa7.52□□□□□ -1.21
SCARNA6.1-201ENST00000516989 NGEFQ8N5V2 710 aa7.52□□□□□ -1.21
SCARNA6.1-201ENST00000516989 SLC4A5Q9BY07 1137 aa7.52□□□□□ -1.21
SCARNA6.1-201ENST00000516989 TFCP2L1Q9NZI6 479 aa7.52□□□□□ -1.21
SCARNA6.1-201ENST00000516989 SBF2Q86WG5 1849 aa7.52□□□□□ -1.21
SCARNA6.1-201ENST00000516989 NHSQ6T4R5 1651 aa7.51□□□□□ -1.21
SCARNA6.1-201ENST00000516989 CHL1O00533 1208 aa7.51□□□□□ -1.21
SCARNA6.1-201ENST00000516989 STARD3NLO95772 234 aa7.51□□□□□ -1.21
SCARNA6.1-201ENST00000516989 SNRPA1P09661 255 aaKnown RBP7.51□□□□□ -1.21
SCARNA6.1-201ENST00000516989 EIF4A1P60842 406 aaKnown RBP7.51□□□□□ -1.21
SCARNA6.1-201ENST00000516989 SLC15A2Q16348 729 aa7.51□□□□□ -1.21
SCARNA6.1-201ENST00000516989 WDR63Q8IWG1 891 aa7.51□□□□□ -1.21
SCARNA6.1-201ENST00000516989 LINC00116Q8NCU8 138 aa7.51□□□□□ -1.21
SCARNA6.1-201ENST00000516989 EPS8L1Q8TE68 723 aa7.51□□□□□ -1.21
SCARNA6.1-201ENST00000516989 SYMPKQ92797 1274 aaKnown RBP7.51□□□□□ -1.21
SCARNA6.1-201ENST00000516989 PBXIP1Q96AQ6 731 aa7.51□□□□□ -1.21
SCARNA6.1-201ENST00000516989 TEX13AQ9BXU3 409 aaPredicted RBP7.51□□□□□ -1.21
SCARNA6.1-201ENST00000516989 IFT57Q9NWB7 429 aa7.51□□□□□ -1.21
SCARNA6.1-201ENST00000516989 BABAM1Q9NWV8 329 aa7.51□□□□□ -1.21
SCARNA6.1-201ENST00000516989 USP16Q9Y5T5 823 aa7.51□□□□□ -1.21
SCARNA6.1-201ENST00000516989 TOGARAM1Q9Y4F4 1720 aa7.5□□□□□ -1.21
SCARNA6.1-201ENST00000516989 PRAMEF22A3QJZ6 481 aa7.5□□□□□ -1.21
SCARNA6.1-201ENST00000516989 ELL2O00472 640 aaPredicted RBP7.5□□□□□ -1.21
SCARNA6.1-201ENST00000516989 CFHP08603 1231 aa7.5□□□□□ -1.21
SCARNA6.1-201ENST00000516989 EIF2S2P20042 333 aaKnown RBP7.5□□□□□ -1.21
SCARNA6.1-201ENST00000516989 HNRNPUQ00839 825 aaKnown RBP eCLIP7.5□□□□□ -1.21
SCARNA6.1-201ENST00000516989 ZNF827Q17R98 1081 aa7.5□□□□□ -1.21
SCARNA6.1-201ENST00000516989 DMRTA1Q5VZB9 504 aa7.5□□□□□ -1.21
SCARNA6.1-201ENST00000516989 SAMD7Q7Z3H4 446 aa7.5□□□□□ -1.21
SCARNA6.1-201ENST00000516989 ALG2Q9H553 416 aa7.5□□□□□ -1.21
SCARNA6.1-201ENST00000516989 MBIPQ9NS73 344 aa7.5□□□□□ -1.21
SCARNA6.1-201ENST00000516989 BTAF1O14981 1849 aa7.5□□□□□ -1.21
SCARNA6.1-201ENST00000516989 ITGB4P16144 1822 aa7.5□□□□□ -1.21
SCARNA6.1-201ENST00000516989 HEG1Q9ULI3 1381 aa7.49□□□□□ -1.21
SCARNA6.1-201ENST00000516989 SCN11AQ9UI33 1791 aa7.49□□□□□ -1.21
SCARNA6.1-201ENST00000516989 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.49□□□□□ -1.21
SCARNA6.1-201ENST00000516989 GIGYF1O75420 1035 aaPredicted RBP7.49□□□□□ -1.21
SCARNA6.1-201ENST00000516989 A1BGP04217 495 aa7.49□□□□□ -1.21
SCARNA6.1-201ENST00000516989 ZNF853P0CG23 659 aa7.49□□□□□ -1.21
SCARNA6.1-201ENST00000516989 CYP19A1P11511 503 aaPredicted RBP7.49□□□□□ -1.21
SCARNA6.1-201ENST00000516989 CANXP27824 592 aaKnown RBP7.49□□□□□ -1.21
SCARNA6.1-201ENST00000516989 TRAPPC3LQ5T215 181 aa7.49□□□□□ -1.21
SCARNA6.1-201ENST00000516989 RC3H1Q5TC82 1133 aaKnown RBP7.49□□□□□ -1.21
SCARNA6.1-201ENST00000516989 POTEEQ6S8J3 1075 aa7.49□□□□□ -1.21
SCARNA6.1-201ENST00000516989 SMIM5Q71RC9 77 aa7.49□□□□□ -1.21
SCARNA6.1-201ENST00000516989 PRR7Q8TB68 274 aa7.49□□□□□ -1.21
SCARNA6.1-201ENST00000516989 TSR2Q969E8 191 aaKnown RBP7.49□□□□□ -1.21
SCARNA6.1-201ENST00000516989 PPP1R12CQ9BZL4 782 aa7.49□□□□□ -1.21
SCARNA6.1-201ENST00000516989 RTCBQ9Y3I0 505 aaKnown RBP7.49□□□□□ -1.21
SCARNA6.1-201ENST00000516989 TNS1Q9HBL0 1735 aaKnown RBP7.49□□□□□ -1.21
SCARNA6.1-201ENST00000516989 CRKLP46109 303 aaKnown RBP7.48□□□□□ -1.21
SCARNA6.1-201ENST00000516989 PIP4K2AP48426 406 aaPredicted RBP7.48□□□□□ -1.21
SCARNA6.1-201ENST00000516989 NR6A1Q15406 480 aa7.48□□□□□ -1.21
SCARNA6.1-201ENST00000516989 KRT24Q2M2I5 525 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms