RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 SRPK2P78362 688 aaKnown RBP6.26□□□□□ -1.41
RNU4-49P-201ENST00000516080 FAM69CQ0P6D2 419 aa6.26□□□□□ -1.41
RNU4-49P-201ENST00000516080 DOC2BQ14184 412 aa6.26□□□□□ -1.41
RNU4-49P-201ENST00000516080 OCLNQ16625 522 aa6.26□□□□□ -1.41
RNU4-49P-201ENST00000516080 COX20Q5RI15 118 aa6.26□□□□□ -1.41
RNU4-49P-201ENST00000516080 DHX32Q7L7V1 743 aaKnown RBP6.26□□□□□ -1.41
RNU4-49P-201ENST00000516080 KRT25Q7Z3Z0 450 aa6.26□□□□□ -1.41
RNU4-49P-201ENST00000516080 TREML1Q86YW5 311 aa6.26□□□□□ -1.41
RNU4-49P-201ENST00000516080 TRPM4Q8TD43 1214 aa6.26□□□□□ -1.41
RNU4-49P-201ENST00000516080 CCDC97Q96F63 343 aaPredicted RBP6.26□□□□□ -1.41
RNU4-49P-201ENST00000516080 FRRS1LQ9P0K9 344 aa6.26□□□□□ -1.41
RNU4-49P-201ENST00000516080 ZFATQ9P243 1243 aa6.26□□□□□ -1.41
RNU4-49P-201ENST00000516080 NAGPAQ9UK23 515 aa6.26□□□□□ -1.41
RNU4-49P-201ENST00000516080 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.25□□□□□ -1.41
RNU4-49P-201ENST00000516080 A0A0A0MRY4 1105 aa6.25□□□□□ -1.41
RNU4-49P-201ENST00000516080 C9orf172C9J069 976 aa6.25□□□□□ -1.41
RNU4-49P-201ENST00000516080 SASH3O75995 380 aa6.25□□□□□ -1.41
RNU4-49P-201ENST00000516080 BRD2P25440 801 aaKnown RBP6.25□□□□□ -1.41
RNU4-49P-201ENST00000516080 GPLD1P80108 840 aa6.25□□□□□ -1.41
RNU4-49P-201ENST00000516080 STK32AQ8WU08 396 aa6.25□□□□□ -1.41
RNU4-49P-201ENST00000516080 SERPINA10Q9UK55 444 aa6.25□□□□□ -1.41
RNU4-49P-201ENST00000516080 PTCD1O75127 700 aaKnown RBP6.24□□□□□ -1.41
RNU4-49P-201ENST00000516080 XYLBO75191 536 aa6.24□□□□□ -1.41
RNU4-49P-201ENST00000516080 CPB1P15086 417 aa6.24□□□□□ -1.41
RNU4-49P-201ENST00000516080 NRLP54845 237 aa6.24□□□□□ -1.41
RNU4-49P-201ENST00000516080 GRIK4Q16099 956 aa6.24□□□□□ -1.41
RNU4-49P-201ENST00000516080 C16orf46Q6P387 395 aa6.24□□□□□ -1.41
RNU4-49P-201ENST00000516080 ELMSAN1Q6PJG2 1045 aa6.24□□□□□ -1.41
RNU4-49P-201ENST00000516080 RGL4Q8IZJ4 473 aa6.24□□□□□ -1.41
RNU4-49P-201ENST00000516080 CMTR1Q8N1G2 835 aaKnown RBP6.24□□□□□ -1.41
RNU4-49P-201ENST00000516080 TTC9Q92623 222 aa6.24□□□□□ -1.41
RNU4-49P-201ENST00000516080 TLR7Q9NYK1 1049 aaKnown RBP6.24□□□□□ -1.41
RNU4-49P-201ENST00000516080 CXXC1Q9P0U4 656 aaPredicted RBP6.24□□□□□ -1.41
RNU4-49P-201ENST00000516080 NRG1Q02297 640 aaPredicted RBP6.23□□□□□ -1.41
RNU4-49P-201ENST00000516080 PERM1Q5SV97 790 aa6.23□□□□□ -1.41
RNU4-49P-201ENST00000516080 DMRTC2Q8IXT2 367 aaPredicted RBP6.23□□□□□ -1.41
RNU4-49P-201ENST00000516080 DTWD1Q8N5C7 304 aa6.23□□□□□ -1.41
RNU4-49P-201ENST00000516080 PBXIP1Q96AQ6 731 aa6.23□□□□□ -1.41
RNU4-49P-201ENST00000516080 FAM13BQ9NYF5 915 aa6.23□□□□□ -1.41
RNU4-49P-201ENST00000516080 ZBTB42B2RXF5 422 aa6.22□□□□□ -1.41
RNU4-49P-201ENST00000516080 PSAPP07602 524 aa6.22□□□□□ -1.41
RNU4-49P-201ENST00000516080 MLLT1Q03111 559 aaPredicted RBP6.22□□□□□ -1.41
RNU4-49P-201ENST00000516080 TMEM164Q5U3C3 297 aa6.22□□□□□ -1.41
RNU4-49P-201ENST00000516080 MSL1Q68DK7 614 aa6.22□□□□□ -1.41
RNU4-49P-201ENST00000516080 ILDR2Q71H61 639 aa6.22□□□□□ -1.41
RNU4-49P-201ENST00000516080 FMR1NBQ8N0W7 255 aaPredicted RBP6.22□□□□□ -1.41
RNU4-49P-201ENST00000516080 CLP1Q92989 425 aaKnown RBP6.22□□□□□ -1.41
RNU4-49P-201ENST00000516080 LENG1Q96BZ8 264 aaPredicted RBP6.22□□□□□ -1.41
RNU4-49P-201ENST00000516080 LPIN3Q9BQK8 851 aa6.22□□□□□ -1.41
RNU4-49P-201ENST00000516080 SEMA6BQ9H3T3 888 aa6.22□□□□□ -1.41
RNU4-49P-201ENST00000516080 USP20Q9Y2K6 914 aa6.22□□□□□ -1.41
RNU4-49P-201ENST00000516080 SELPP16109 830 aa6.21□□□□□ -1.42
RNU4-49P-201ENST00000516080 PLAURQ03405 335 aa6.21□□□□□ -1.42
RNU4-49P-201ENST00000516080 ADGRE1Q14246 886 aa6.21□□□□□ -1.42
RNU4-49P-201ENST00000516080 WFDC8Q8IUA0 241 aa6.21□□□□□ -1.42
RNU4-49P-201ENST00000516080 ETFBKMTQ8IXQ9 262 aa6.21□□□□□ -1.42
RNU4-49P-201ENST00000516080 PIK3R5Q8WYR1 880 aa6.21□□□□□ -1.42
RNU4-49P-201ENST00000516080 SAP130Q9H0E3 1048 aa6.21□□□□□ -1.42
RNU4-49P-201ENST00000516080 TPSG1Q9NRR2 321 aa6.21□□□□□ -1.42
RNU4-49P-201ENST00000516080 KCNMB2Q9Y691 235 aa6.21□□□□□ -1.42
RNU4-49P-201ENST00000516080 HOXD8P13378 290 aaPredicted RBP6.2□□□□□ -1.42
RNU4-49P-201ENST00000516080 EIF2AK2P19525 551 aaKnown RBP6.2□□□□□ -1.42
RNU4-49P-201ENST00000516080 SOX18P35713 384 aa6.2□□□□□ -1.42
RNU4-49P-201ENST00000516080 MBTPS1Q14703 1052 aa6.2□□□□□ -1.42
RNU4-49P-201ENST00000516080 GRIK5Q16478 980 aa6.2□□□□□ -1.42
RNU4-49P-201ENST00000516080 RSPO4Q2I0M5 234 aaPredicted RBP6.2□□□□□ -1.42
RNU4-49P-201ENST00000516080 FBXO11Q86XK2 927 aa6.2□□□□□ -1.42
RNU4-49P-201ENST00000516080 MKNK1Q9BUB5 465 aa6.2□□□□□ -1.42
RNU4-49P-201ENST00000516080 SMG9Q9H0W8 520 aaKnown RBP6.2□□□□□ -1.42
RNU4-49P-201ENST00000516080 RBSNQ9H1K0 784 aa6.2□□□□□ -1.42
RNU4-49P-201ENST00000516080 LOC102724428A0A0B4J2F2 783 aa6.19□□□□□ -1.42
RNU4-49P-201ENST00000516080 TNFRSF10BO14763 440 aa6.19□□□□□ -1.42
RNU4-49P-201ENST00000516080 MMP20O60882 483 aa6.19□□□□□ -1.42
RNU4-49P-201ENST00000516080 SIK1P57059 783 aa6.19□□□□□ -1.42
RNU4-49P-201ENST00000516080 NAA30Q147X3 362 aaPredicted RBP6.19□□□□□ -1.42
RNU4-49P-201ENST00000516080 NKAPLQ5M9Q1 402 aa6.19□□□□□ -1.42
RNU4-49P-201ENST00000516080 HFE2Q6ZVN8 426 aa6.19□□□□□ -1.42
RNU4-49P-201ENST00000516080 TXNRD3Q86VQ6 643 aa6.19□□□□□ -1.42
RNU4-49P-201ENST00000516080 NLRP13Q86W25 1043 aa6.19□□□□□ -1.42
RNU4-49P-201ENST00000516080 STIM2Q9P246 746 aa6.19□□□□□ -1.42
RNU4-49P-201ENST00000516080 USP21Q9UK80 565 aa6.19□□□□□ -1.42
RNU4-49P-201ENST00000516080 FNDC3AQ9Y2H6 1198 aaKnown RBP6.19□□□□□ -1.42
RNU4-49P-201ENST00000516080 UBAP1LF5GYI3 381 aa6.18□□□□□ -1.42
RNU4-49P-201ENST00000516080 GHRHP01286 108 aa6.18□□□□□ -1.42
RNU4-49P-201ENST00000516080 SHISA2Q6UWI4 295 aa6.18□□□□□ -1.42
RNU4-49P-201ENST00000516080 CAPN12Q6ZSI9 719 aa6.18□□□□□ -1.42
RNU4-49P-201ENST00000516080 ABTB2Q8N961 1025 aa6.18□□□□□ -1.42
RNU4-49P-201ENST00000516080 PLD4Q96BZ4 506 aa6.18□□□□□ -1.42
RNU4-49P-201ENST00000516080 ATP2B4P23634 1241 aa6.17□□□□□ -1.42
RNU4-49P-201ENST00000516080 ZAP70P43403 619 aa6.17□□□□□ -1.42
RNU4-49P-201ENST00000516080 TRIP4Q15650 581 aaPredicted RBP6.17□□□□□ -1.42
RNU4-49P-201ENST00000516080 CACTIN-AS1Q8N1I8 211 aa6.17□□□□□ -1.42
RNU4-49P-201ENST00000516080 GTF3C3Q9Y5Q9 886 aa6.17□□□□□ -1.42
RNU4-49P-201ENST00000516080 J3QW42 95 aa6.16□□□□□ -1.42
RNU4-49P-201ENST00000516080 DYRK3O43781 588 aa6.16□□□□□ -1.42
RNU4-49P-201ENST00000516080 H2AFB1P0C5Y9 115 aa6.16□□□□□ -1.42
RNU4-49P-201ENST00000516080 H2AFB2P0C5Z0 115 aa6.16□□□□□ -1.42
RNU4-49P-201ENST00000516080 ITGB7P26010 798 aa6.16□□□□□ -1.42
RNU4-49P-201ENST00000516080 FAM26DQ5JW98 314 aa6.16□□□□□ -1.42
RNU4-49P-201ENST00000516080 IGF2-ASQ6U949 168 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms