RNA–Protein interactions for RNA: ENST00000514694.5

MATR3-239, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-239ENST00000514694 RBM17Q96I25 401 aaKnown RBP19.52■□□□□ 0.72
MATR3-239ENST00000514694 RCAN3Q9UKA8 241 aa19.52■□□□□ 0.72
MATR3-239ENST00000514694 ALDH1B1P30837 517 aa19.51■□□□□ 0.71
MATR3-239ENST00000514694 TTLL11Q8NHH1 800 aa19.51■□□□□ 0.71
MATR3-239ENST00000514694 KAZALD1Q96I82 304 aa19.51■□□□□ 0.71
MATR3-239ENST00000514694 PLA2G12BQ9BX93 195 aa19.51■□□□□ 0.71
MATR3-239ENST00000514694 USP44Q9H0E7 712 aa19.51■□□□□ 0.71
MATR3-239ENST00000514694 SEC31BQ9NQW1 1179 aa19.51■□□□□ 0.71
MATR3-239ENST00000514694 ARFGEF1Q9Y6D6 1849 aa19.51■□□□□ 0.71
MATR3-239ENST00000514694 UTYO14607 1347 aa19.51■□□□□ 0.71
MATR3-239ENST00000514694 IPO8O15397 1037 aaKnown RBP19.5■□□□□ 0.71
MATR3-239ENST00000514694 FOXO4P98177 505 aa19.5■□□□□ 0.71
MATR3-239ENST00000514694 ZKSCAN2Q63HK3 967 aa19.5■□□□□ 0.71
MATR3-239ENST00000514694 ARHGAP27Q6ZUM4 889 aa19.5■□□□□ 0.71
MATR3-239ENST00000514694 CELF1Q92879 486 aaKnown RBP19.5■□□□□ 0.71
MATR3-239ENST00000514694 C9orf78Q9NZ63 289 aaPredicted RBP19.5■□□□□ 0.71
MATR3-239ENST00000514694 CACNA1SQ13698 1873 aa19.5■□□□□ 0.71
MATR3-239ENST00000514694 NFKBIEO00221 500 aa19.49■□□□□ 0.71
MATR3-239ENST00000514694 RLBP1P12271 317 aa19.49■□□□□ 0.71
MATR3-239ENST00000514694 CCT4P50991 539 aaKnown RBP19.49■□□□□ 0.71
MATR3-239ENST00000514694 PRELPP51888 382 aa19.49■□□□□ 0.71
MATR3-239ENST00000514694 INTS3Q68E01 1043 aaKnown RBP19.49■□□□□ 0.71
MATR3-239ENST00000514694 DDX46Q7L014 1031 aaKnown RBP19.49■□□□□ 0.71
MATR3-239ENST00000514694 SUCLG2Q96I99 432 aa19.49■□□□□ 0.71
MATR3-239ENST00000514694 GREM2Q9H772 168 aa19.49■□□□□ 0.71
MATR3-239ENST00000514694 SNED1Q8TER0 1413 aa19.49■□□□□ 0.71
MATR3-239ENST00000514694 TAF1P21675 1872 aa19.48■□□□□ 0.71
MATR3-239ENST00000514694 PPEF1O14829 653 aaPredicted RBP19.48■□□□□ 0.71
MATR3-239ENST00000514694 RASSF7Q02833 373 aa19.48■□□□□ 0.71
MATR3-239ENST00000514694 GRAPQ13588 217 aa19.48■□□□□ 0.71
MATR3-239ENST00000514694 CCDC152Q4G0S7 254 aa19.48■□□□□ 0.71
MATR3-239ENST00000514694 GRAPLQ8TC17 118 aaPredicted RBP19.48■□□□□ 0.71
MATR3-239ENST00000514694 PLIN1O60240 522 aa19.47■□□□□ 0.71
MATR3-239ENST00000514694 CSF1RP07333 972 aa19.47■□□□□ 0.71
MATR3-239ENST00000514694 HSP90B1P14625 803 aaKnown RBP19.47■□□□□ 0.71
MATR3-239ENST00000514694 FAM161AQ3B820 660 aa19.47■□□□□ 0.71
MATR3-239ENST00000514694 TMEM57Q8N5G2 664 aa19.47■□□□□ 0.71
MATR3-239ENST00000514694 PPP4R3CPQ6ZMV5 832 aa19.46■□□□□ 0.71
MATR3-239ENST00000514694 MEIS3Q99687 375 aa19.46■□□□□ 0.71
MATR3-239ENST00000514694 PANK1Q8TE04 598 aa19.45■□□□□ 0.7
MATR3-239ENST00000514694 ATP6V0A2Q9Y487 856 aa19.45■□□□□ 0.7
MATR3-239ENST00000514694 RTL9Q8NET4 1388 aa19.44■□□□□ 0.7
MATR3-239ENST00000514694 BBOX1O75936 387 aa19.44■□□□□ 0.7
MATR3-239ENST00000514694 CCDC93Q567U6 631 aa19.44■□□□□ 0.7
MATR3-239ENST00000514694 LMBR1LQ6UX01 489 aa19.44■□□□□ 0.7
MATR3-239ENST00000514694 ANKRD44Q8N8A2 993 aa19.44■□□□□ 0.7
MATR3-239ENST00000514694 BICC1Q9H694 974 aaKnown RBP19.44■□□□□ 0.7
MATR3-239ENST00000514694 RPS8P62241 208 aaKnown RBP19.43■□□□□ 0.7
MATR3-239ENST00000514694 DZIP1LQ8IYY4 767 aaKnown RBP19.43■□□□□ 0.7
MATR3-239ENST00000514694 ITGA6P23229 1130 aa19.42■□□□□ 0.7
MATR3-239ENST00000514694 RABL6Q3YEC7 729 aaPredicted RBP19.41■□□□□ 0.7
MATR3-239ENST00000514694 SOGA3Q5TF21 947 aa19.41■□□□□ 0.7
MATR3-239ENST00000514694 SP8Q8IXZ3 490 aa19.41■□□□□ 0.7
MATR3-239ENST00000514694 FTSJ3Q8IY81 847 aaKnown RBP19.41■□□□□ 0.7
MATR3-239ENST00000514694 TAOK3Q9H2K8 898 aa19.41■□□□□ 0.7
MATR3-239ENST00000514694 FER1L6Q2WGJ9 1857 aa19.41■□□□□ 0.7
MATR3-239ENST00000514694 MYH3P11055 1940 aa19.41■□□□□ 0.7
MATR3-239ENST00000514694 UBTFL1P0CB47 393 aaPredicted RBP19.4■□□□□ 0.7
MATR3-239ENST00000514694 C20orf194Q5TEA3 1177 aa19.4■□□□□ 0.7
MATR3-239ENST00000514694 CHMP3Q9Y3E7 222 aa19.4■□□□□ 0.7
MATR3-239ENST00000514694 LRRFIP2Q9Y608 721 aaKnown RBP19.4■□□□□ 0.7
MATR3-239ENST00000514694 FKBP4Q02790 459 aaKnown RBP eCLIP19.39■□□□□ 0.698e-7■■■□□ 16.6
MATR3-239ENST00000514694 C9orf131Q5VYM1 1079 aa19.39■□□□□ 0.69
MATR3-239ENST00000514694 CC2D2BQ6DHV5 1058 aa19.39■□□□□ 0.69
MATR3-239ENST00000514694 ANKRD18AQ8IVF6 992 aa19.39■□□□□ 0.69
MATR3-239ENST00000514694 RTKN2Q8IZC4 609 aa19.39■□□□□ 0.69
MATR3-239ENST00000514694 ZNF594Q96JF6 807 aaPredicted RBP19.39■□□□□ 0.69
MATR3-239ENST00000514694 ZNF277Q9NRM2 450 aaPredicted RBP19.39■□□□□ 0.69
MATR3-239ENST00000514694 LTBP3Q9NS15 1303 aa19.39■□□□□ 0.69
MATR3-239ENST00000514694 LRRC37AA6NMS7 1700 aa19.39■□□□□ 0.69
MATR3-239ENST00000514694 GPSM2P81274 684 aa19.38■□□□□ 0.69
MATR3-239ENST00000514694 ITPRIPQ8IWB1 547 aa19.38■□□□□ 0.69
MATR3-239ENST00000514694 CDC5LQ99459 802 aaKnown RBP19.38■□□□□ 0.69
MATR3-239ENST00000514694 DUOX1Q9NRD9 1551 aa19.38■□□□□ 0.69
MATR3-239ENST00000514694 WTIPA6NIX2 430 aaPredicted RBP19.37■□□□□ 0.69
MATR3-239ENST00000514694 LMNB1P20700 586 aa19.37■□□□□ 0.69
MATR3-239ENST00000514694 IFIT5Q13325 482 aaKnown RBP19.37■□□□□ 0.69
MATR3-239ENST00000514694 TMC4Q7Z404 712 aa19.37■□□□□ 0.69
MATR3-239ENST00000514694 PSMD1Q99460 953 aa19.37■□□□□ 0.69
MATR3-239ENST00000514694 RNF181Q9P0P0 153 aa19.37■□□□□ 0.69
MATR3-239ENST00000514694 COL4A5P29400 1685 aa19.36■□□□□ 0.69
MATR3-239ENST00000514694 ANKRD18BA2A2Z9 1011 aa19.36■□□□□ 0.69
MATR3-239ENST00000514694 BSDC1Q9NW68 430 aaPredicted RBP19.36■□□□□ 0.69
MATR3-239ENST00000514694 LTBP1Q14766 1721 aa19.35■□□□□ 0.69
MATR3-239ENST00000514694 ZBTB7BO15156 539 aaPredicted RBP19.35■□□□□ 0.69
MATR3-239ENST00000514694 GNAI3P08754 354 aa19.35■□□□□ 0.69
MATR3-239ENST00000514694 DPP8Q6V1X1 898 aaPredicted RBP19.35■□□□□ 0.69
MATR3-239ENST00000514694 MPNDQ8N594 471 aa19.35■□□□□ 0.69
MATR3-239ENST00000514694 KLHDC4Q8TBB5 520 aa19.35■□□□□ 0.69
MATR3-239ENST00000514694 GPR101Q96P66 508 aaPredicted RBP19.35■□□□□ 0.69
MATR3-239ENST00000514694 RTFDC1Q9BY42 306 aaPredicted RBP19.35■□□□□ 0.69
MATR3-239ENST00000514694 POLLQ9UGP5 575 aa19.35■□□□□ 0.69
MATR3-239ENST00000514694 MINPP1Q9UNW1 487 aa19.35■□□□□ 0.69
MATR3-239ENST00000514694 NSFL1CQ9UNZ2 370 aaKnown RBP19.35■□□□□ 0.69
MATR3-239ENST00000514694 CHD4Q14839 1912 aa19.34■□□□□ 0.69
MATR3-239ENST00000514694 YY1P25490 414 aa19.34■□□□□ 0.69
MATR3-239ENST00000514694 IGHMBP2P38935 993 aaKnown RBP19.34■□□□□ 0.69
MATR3-239ENST00000514694 RFX5P48382 616 aaPredicted RBP19.34■□□□□ 0.69
MATR3-239ENST00000514694 CCDC57Q2TAC2 916 aa19.34■□□□□ 0.69
MATR3-239ENST00000514694 PUS3Q9BZE2 481 aaKnown RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms