RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 PNMA8AQ86V59 439 aaPredicted RBP17.25■□□□□ 0.35
PFDN1-206ENST00000514611 SP8Q8IXZ3 490 aa17.25■□□□□ 0.35
PFDN1-206ENST00000514611 RTFDC1Q9BY42 306 aaPredicted RBP17.25■□□□□ 0.35
PFDN1-206ENST00000514611 GOLGA2Q08379 1002 aa17.24■□□□□ 0.35
PFDN1-206ENST00000514611 RIC3Q7Z5B4 369 aa17.24■□□□□ 0.35
PFDN1-206ENST00000514611 MPNDQ8N594 471 aa17.24■□□□□ 0.35
PFDN1-206ENST00000514611 CELF1Q92879 486 aaKnown RBP17.24■□□□□ 0.35
PFDN1-206ENST00000514611 LRRC37AA6NMS7 1700 aa17.24■□□□□ 0.35
PFDN1-206ENST00000514611 TAF1P21675 1872 aa17.23■□□□□ 0.35
PFDN1-206ENST00000514611 HSPA1AP0DMV8 641 aaKnown RBP17.23■□□□□ 0.35
PFDN1-206ENST00000514611 HSPA1BP0DMV9 641 aaKnown RBP17.23■□□□□ 0.35
PFDN1-206ENST00000514611 LMOD1P29536 600 aaPredicted RBP17.23■□□□□ 0.35
PFDN1-206ENST00000514611 EPS15P42566 896 aa17.23■□□□□ 0.35
PFDN1-206ENST00000514611 TSPYL6Q8N831 410 aa17.23■□□□□ 0.35
PFDN1-206ENST00000514611 SUPT20HQ8NEM7 779 aa17.23■□□□□ 0.35
PFDN1-206ENST00000514611 TSR2Q969E8 191 aaKnown RBP17.23■□□□□ 0.35
PFDN1-206ENST00000514611 IRS4O14654 1257 aaPredicted RBP17.22■□□□□ 0.35
PFDN1-206ENST00000514611 SF3B3Q15393 1217 aaKnown RBP17.22■□□□□ 0.35
PFDN1-206ENST00000514611 CNTROBQ8N137 903 aa17.22■□□□□ 0.35
PFDN1-206ENST00000514611 MYD88Q99836 296 aa17.22■□□□□ 0.35
PFDN1-206ENST00000514611 CNTNAP1P78357 1384 aa17.22■□□□□ 0.35
PFDN1-206ENST00000514611 CXCL9Q07325 125 aa17.21■□□□□ 0.35
PFDN1-206ENST00000514611 KIAA2012Q0VF49 1180 aa17.21■□□□□ 0.35
PFDN1-206ENST00000514611 TRIM28Q13263 835 aaKnown RBP17.21■□□□□ 0.35
PFDN1-206ENST00000514611 COL13A1Q5TAT6 717 aaPredicted RBP17.21■□□□□ 0.35
PFDN1-206ENST00000514611 VPS33BQ9H267 617 aa17.21■□□□□ 0.35
PFDN1-206ENST00000514611 ZNRF3Q9ULT6 936 aa17.21■□□□□ 0.35
PFDN1-206ENST00000514611 TMEM88BA6NKF7 163 aa17.2■□□□□ 0.34
PFDN1-206ENST00000514611 YDJCA8MPS7 323 aa17.19■□□□□ 0.34
PFDN1-206ENST00000514611 CCDC30Q5VVM6 783 aa17.19■□□□□ 0.34
PFDN1-206ENST00000514611 TMC4Q7Z404 712 aa17.19■□□□□ 0.34
PFDN1-206ENST00000514611 ZBTB38Q8NAP3 1195 aaPredicted RBP17.19■□□□□ 0.34
PFDN1-206ENST00000514611 GPRC5DQ9NZD1 345 aa17.19■□□□□ 0.34
PFDN1-206ENST00000514611 RAD17O75943 681 aa17.18■□□□□ 0.34
PFDN1-206ENST00000514611 GMPSP49915 693 aaPredicted RBP17.18■□□□□ 0.34
PFDN1-206ENST00000514611 FMR1Q06787 632 aaKnown RBP eCLIP17.18■□□□□ 0.34
PFDN1-206ENST00000514611 CCDC27Q2M243 656 aa17.18■□□□□ 0.34
PFDN1-206ENST00000514611 WWC1Q8IX03 1113 aa17.18■□□□□ 0.34
PFDN1-206ENST00000514611 JARID2Q92833 1246 aaPredicted RBP17.18■□□□□ 0.34
PFDN1-206ENST00000514611 MRS2Q9HD23 443 aa17.18■□□□□ 0.34
PFDN1-206ENST00000514611 NSFL1CQ9UNZ2 370 aaKnown RBP17.18■□□□□ 0.34
PFDN1-206ENST00000514611 ZEB1P37275 1124 aaPredicted RBP17.17■□□□□ 0.34
PFDN1-206ENST00000514611 GPSM2P81274 684 aa17.17■□□□□ 0.34
PFDN1-206ENST00000514611 CIAPIN1Q6FI81 312 aa17.17■□□□□ 0.34
PFDN1-206ENST00000514611 USP50Q70EL3 339 aaPredicted RBP17.17■□□□□ 0.34
PFDN1-206ENST00000514611 CCDC191Q8NCU4 936 aa17.17■□□□□ 0.34
PFDN1-206ENST00000514611 GPR101Q96P66 508 aaPredicted RBP17.17■□□□□ 0.34
PFDN1-206ENST00000514611 METTL22Q9BUU2 404 aaPredicted RBP17.17■□□□□ 0.34
PFDN1-206ENST00000514611 SEC31BQ9NQW1 1179 aa17.17■□□□□ 0.34
PFDN1-206ENST00000514611 CWC25Q9NXE8 425 aaPredicted RBP17.17■□□□□ 0.34
PFDN1-206ENST00000514611 DDX58O95786 925 aaKnown RBP17.16■□□□□ 0.34
PFDN1-206ENST00000514611 CCDC85AQ96PX6 553 aaPredicted RBP17.16■□□□□ 0.34
PFDN1-206ENST00000514611 ADARB2Q9NS39 739 aaKnown RBP17.16■□□□□ 0.34
PFDN1-206ENST00000514611 POLLQ9UGP5 575 aa17.16■□□□□ 0.34
PFDN1-206ENST00000514611 MAP3K2Q9Y2U5 619 aa17.16■□□□□ 0.34
PFDN1-206ENST00000514611 SHTN1A0MZ66 631 aa17.15■□□□□ 0.34
PFDN1-206ENST00000514611 TRAF5O00463 557 aa17.15■□□□□ 0.34
PFDN1-206ENST00000514611 RIMBP2O15034 1052 aa17.15■□□□□ 0.34
PFDN1-206ENST00000514611 PCCAP05165 728 aaPredicted RBP17.15■□□□□ 0.34
PFDN1-206ENST00000514611 VEGFBP49765 207 aa17.15■□□□□ 0.34
PFDN1-206ENST00000514611 WASHC4Q2M389 1173 aa17.15■□□□□ 0.34
PFDN1-206ENST00000514611 DBNDD1Q9H9R9 158 aa17.15■□□□□ 0.34
PFDN1-206ENST00000514611 PI4KAP2A4QPH2 592 aa17.14■□□□□ 0.33
PFDN1-206ENST00000514611 ZNF316A6NFI3 1004 aaPredicted RBP17.14■□□□□ 0.33
PFDN1-206ENST00000514611 C6orf229H3BNL8 230 aa17.14■□□□□ 0.33
PFDN1-206ENST00000514611 ANP32CO43423 234 aa17.14■□□□□ 0.33
PFDN1-206ENST00000514611 RPS8P62241 208 aaKnown RBP17.14■□□□□ 0.33
PFDN1-206ENST00000514611 TWISTNBQ3B726 338 aaPredicted RBP17.14■□□□□ 0.33
PFDN1-206ENST00000514611 PI4KAP1Q8N8J0 262 aa17.14■□□□□ 0.33
PFDN1-206ENST00000514611 TRPM4Q8TD43 1214 aa17.14■□□□□ 0.33
PFDN1-206ENST00000514611 BCL2L13Q9BXK5 485 aa17.14■□□□□ 0.33
PFDN1-206ENST00000514611 CDHR2Q9BYE9 1310 aa17.14■□□□□ 0.33
PFDN1-206ENST00000514611 RASSF10A6NK89 507 aa17.13■□□□□ 0.33
PFDN1-206ENST00000514611 PDE8AO60658 829 aa17.13■□□□□ 0.33
PFDN1-206ENST00000514611 IGKV5-2P06315 115 aa17.13■□□□□ 0.33
PFDN1-206ENST00000514611 TNIP1Q15025 636 aa17.13■□□□□ 0.33
PFDN1-206ENST00000514611 CCDC152Q4G0S7 254 aa17.13■□□□□ 0.33
PFDN1-206ENST00000514611 G2E3Q7L622 706 aa17.13■□□□□ 0.33
PFDN1-206ENST00000514611 TBC1D16Q8TBP0 767 aa17.13■□□□□ 0.33
PFDN1-206ENST00000514611 STK31Q9BXU1 1019 aa17.13■□□□□ 0.33
PFDN1-206ENST00000514611 ABT1Q9ULW3 272 aaKnown RBP17.13■□□□□ 0.33
PFDN1-206ENST00000514611 ZBTB12Q9Y330 459 aaPredicted RBP17.13■□□□□ 0.33
PFDN1-206ENST00000514611 SALL2Q9Y467 1007 aaPredicted RBP17.13■□□□□ 0.33
PFDN1-206ENST00000514611 FANCIQ9NVI1 1328 aa17.13■□□□□ 0.33
PFDN1-206ENST00000514611 PSMD14O00487 310 aa17.12■□□□□ 0.33
PFDN1-206ENST00000514611 DOK7Q18PE1 504 aa17.12■□□□□ 0.33
PFDN1-206ENST00000514611 KSR2Q6VAB6 950 aa17.12■□□□□ 0.33
PFDN1-206ENST00000514611 IL16Q14005 1332 aa17.12■□□□□ 0.33
PFDN1-206ENST00000514611 RTL9Q8NET4 1388 aa17.12■□□□□ 0.33
PFDN1-206ENST00000514611 ECE2O60344 883 aa17.11■□□□□ 0.33
PFDN1-206ENST00000514611 HSP90B1P14625 803 aaKnown RBP17.11■□□□□ 0.33
PFDN1-206ENST00000514611 HIRAP54198 1017 aaPredicted RBP17.11■□□□□ 0.33
PFDN1-206ENST00000514611 CWF19L2Q2TBE0 894 aaKnown RBP17.11■□□□□ 0.33
PFDN1-206ENST00000514611 MICALL2Q8IY33 904 aa17.11■□□□□ 0.33
PFDN1-206ENST00000514611 CHMP4AQ9BY43 222 aa17.11■□□□□ 0.33
PFDN1-206ENST00000514611 KCNQ5Q9NR82 932 aa17.11■□□□□ 0.33
PFDN1-206ENST00000514611 FOXN1O15353 648 aa17.1■□□□□ 0.33
PFDN1-206ENST00000514611 UFL1O94874 794 aa17.1■□□□□ 0.33
PFDN1-206ENST00000514611 CTSWP56202 376 aa17.1■□□□□ 0.33
PFDN1-206ENST00000514611 DEFB115Q30KQ5 88 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms