RNA–Protein interactions for RNA: ENST00000513240.5

DDR1-271, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 2,882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-271ENST00000513240 MARF1Q9Y4F3 1742 aaKnown RBP17.48■□□□□ 0.39
DDR1-271ENST00000513240 MCM2P49736 904 aa17.48■□□□□ 0.39
DDR1-271ENST00000513240 CAMK4Q16566 473 aa17.48■□□□□ 0.39
DDR1-271ENST00000513240 LMBR1LQ6UX01 489 aa17.48■□□□□ 0.39
DDR1-271ENST00000513240 DBNLQ9UJU6 430 aaKnown RBP17.48■□□□□ 0.39
DDR1-271ENST00000513240 FAM208AQ9UK61 1670 aaKnown RBP17.48■□□□□ 0.39
DDR1-271ENST00000513240 CEBPZQ03701 1054 aaKnown RBP17.47■□□□□ 0.39
DDR1-271ENST00000513240 LRSAM1Q6UWE0 723 aa17.47■□□□□ 0.39
DDR1-271ENST00000513240 KIF3AQ9Y496 699 aa17.47■□□□□ 0.39
DDR1-271ENST00000513240 CYP46A1Q9Y6A2 500 aa17.47■□□□□ 0.39
DDR1-271ENST00000513240 ALDH1L1O75891 902 aa17.47■□□□□ 0.39
DDR1-271ENST00000513240 LARP1Q6PKG0 1096 aaKnown RBP17.47■□□□□ 0.39
DDR1-271ENST00000513240 GPATCH3Q96I76 525 aa17.47■□□□□ 0.39
DDR1-271ENST00000513240 SNRKQ9NRH2 765 aa17.47■□□□□ 0.39
DDR1-271ENST00000513240 KDM4AO75164 1064 aa17.46■□□□□ 0.39
DDR1-271ENST00000513240 NPHP4O75161 1426 aaPredicted RBP17.46■□□□□ 0.39
DDR1-271ENST00000513240 HOXB7P09629 217 aa17.46■□□□□ 0.39
DDR1-271ENST00000513240 HCLS1P14317 486 aaPredicted RBP17.46■□□□□ 0.39
DDR1-271ENST00000513240 IRX5P78411 483 aaPredicted RBP17.46■□□□□ 0.39
DDR1-271ENST00000513240 EVI5LQ96CN4 794 aa17.46■□□□□ 0.39
DDR1-271ENST00000513240 SLC27A2O14975 620 aa17.46■□□□□ 0.38
DDR1-271ENST00000513240 ZSCAN22P10073 491 aaPredicted RBP17.46■□□□□ 0.38
DDR1-271ENST00000513240 TOM1L2Q6ZVM7 507 aa17.46■□□□□ 0.38
DDR1-271ENST00000513240 CCDC171Q6TFL3 1326 aa17.45■□□□□ 0.38
DDR1-271ENST00000513240 WDR33Q9C0J8 1336 aaKnown RBP17.45■□□□□ 0.38
DDR1-271ENST00000513240 RAB11FIP4Q86YS3 637 aa17.45■□□□□ 0.38
DDR1-271ENST00000513240 IFNL2Q8IZJ0 200 aa17.45■□□□□ 0.38
DDR1-271ENST00000513240 SYNE4Q8N205 404 aa17.45■□□□□ 0.38
DDR1-271ENST00000513240 RUFY2Q8WXA3 655 aa17.45■□□□□ 0.38
DDR1-271ENST00000513240 USP25Q9UHP3 1055 aa17.45■□□□□ 0.38
DDR1-271ENST00000513240 JAK2O60674 1132 aa17.44■□□□□ 0.38
DDR1-271ENST00000513240 ZKSCAN1P17029 563 aaPredicted RBP17.44■□□□□ 0.38
DDR1-271ENST00000513240 NECTIN1Q15223 517 aa17.44■□□□□ 0.38
DDR1-271ENST00000513240 TAF3Q5VWG9 929 aa17.44■□□□□ 0.38
DDR1-271ENST00000513240 PRIMPOLQ96LW4 560 aa17.44■□□□□ 0.38
DDR1-271ENST00000513240 METTL22Q9BUU2 404 aaPredicted RBP17.44■□□□□ 0.38
DDR1-271ENST00000513240 TMEM94Q12767 1356 aa17.44■□□□□ 0.38
DDR1-271ENST00000513240 PTPN12Q05209 780 aaKnown RBP17.44■□□□□ 0.38
DDR1-271ENST00000513240 VPS53Q5VIR6 699 aa17.44■□□□□ 0.38
DDR1-271ENST00000513240 CDC37L1Q7L3B6 337 aa17.44■□□□□ 0.38
DDR1-271ENST00000513240 INTS4Q96HW7 963 aaKnown RBP17.44■□□□□ 0.38
DDR1-271ENST00000513240 TTC41PQ6P2S7 1318 aa17.44■□□□□ 0.38
DDR1-271ENST00000513240 NBPF26B4DH59 902 aa17.43■□□□□ 0.38
DDR1-271ENST00000513240 LRRC24Q50LG9 513 aa17.43■□□□□ 0.38
DDR1-271ENST00000513240 NBPF14Q5TI25 921 aa17.43■□□□□ 0.38
DDR1-271ENST00000513240 NBPF10Q6P3W6 841 aaKnown RBP17.43■□□□□ 0.38
DDR1-271ENST00000513240 NBPF15Q8N660 670 aa17.43■□□□□ 0.38
DDR1-271ENST00000513240 PUS3Q9BZE2 481 aaKnown RBP17.43■□□□□ 0.38
DDR1-271ENST00000513240 KDM6AO15550 1401 aaPredicted RBP17.43■□□□□ 0.38
DDR1-271ENST00000513240 SNRPA1P09661 255 aaKnown RBP17.43■□□□□ 0.38
DDR1-271ENST00000513240 HMGN5P82970 282 aaKnown RBP17.43■□□□□ 0.38
DDR1-271ENST00000513240 LARP1BQ659C4 914 aaKnown RBP17.43■□□□□ 0.38
DDR1-271ENST00000513240 GOLIM4O00461 696 aa17.42■□□□□ 0.38
DDR1-271ENST00000513240 F13A1P00488 732 aa17.42■□□□□ 0.38
DDR1-271ENST00000513240 MTX1Q13505 466 aa17.42■□□□□ 0.38
DDR1-271ENST00000513240 CERS3Q8IU89 383 aa17.42■□□□□ 0.38
DDR1-271ENST00000513240 TSPY26PQ9H489 355 aa17.42■□□□□ 0.38
DDR1-271ENST00000513240 AOX1Q06278 1338 aa17.42■□□□□ 0.38
DDR1-271ENST00000513240 KAT6BQ8WYB5 2073 aa17.42■□□□□ 0.38
DDR1-271ENST00000513240 MEGF6O75095 1541 aa17.42■□□□□ 0.38
DDR1-271ENST00000513240 TCHHQ07283 1943 aa17.42■□□□□ 0.38
DDR1-271ENST00000513240 HSP90B1P14625 803 aaKnown RBP17.42■□□□□ 0.38
DDR1-271ENST00000513240 GTF2F1P35269 517 aaKnown RBP eCLIP17.42■□□□□ 0.38
DDR1-271ENST00000513240 NOLC1Q14978 699 aaKnown RBP eCLIP17.42■□□□□ 0.38
DDR1-271ENST00000513240 TTC12Q9H892 705 aaPredicted RBP17.42■□□□□ 0.38
DDR1-271ENST00000513240 PRDM11Q9NQV5 511 aa17.42■□□□□ 0.38
DDR1-271ENST00000513240 MTMR6Q9Y217 621 aa17.42■□□□□ 0.38
DDR1-271ENST00000513240 A0A087WWV3 80 aa17.41■□□□□ 0.38
DDR1-271ENST00000513240 ERC1Q8IUD2 1116 aa17.41■□□□□ 0.38
DDR1-271ENST00000513240 GUCY1B3Q02153 619 aa17.41■□□□□ 0.38
DDR1-271ENST00000513240 TNNI3KQ59H18 835 aa17.41■□□□□ 0.38
DDR1-271ENST00000513240 FPGT-TNNI3KV9GXZ4 949 aa17.41■□□□□ 0.38
DDR1-271ENST00000513240 LRRC37A3O60309 1634 aa17.41■□□□□ 0.38
DDR1-271ENST00000513240 C1orf167Q5SNV9 1468 aa17.4■□□□□ 0.38
DDR1-271ENST00000513240 COL15A1P39059 1388 aa17.4■□□□□ 0.38
DDR1-271ENST00000513240 BLOC1S2Q6QNY1 142 aa17.4■□□□□ 0.38
DDR1-271ENST00000513240 CKAP2LQ8IYA6 745 aa17.4■□□□□ 0.38
DDR1-271ENST00000513240 FBXW7Q969H0 707 aa17.4■□□□□ 0.38
DDR1-271ENST00000513240 FMNL2Q96PY5 1086 aa17.4■□□□□ 0.38
DDR1-271ENST00000513240 ZSWIM6Q9HCJ5 1215 aa17.4■□□□□ 0.38
DDR1-271ENST00000513240 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.4■□□□□ 0.38
DDR1-271ENST00000513240 GOLGB1Q14789 3259 aaKnown RBP17.4■□□□□ 0.38
DDR1-271ENST00000513240 CCT2P78371 535 aaKnown RBP17.4■□□□□ 0.38
DDR1-271ENST00000513240 MAP4K1Q92918 833 aa17.39■□□□□ 0.37
DDR1-271ENST00000513240 MBD3O95983 291 aa17.39■□□□□ 0.37
DDR1-271ENST00000513240 FKBP4Q02790 459 aaKnown RBP eCLIP17.39■□□□□ 0.37
DDR1-271ENST00000513240 SPC24Q8NBT2 197 aa17.38■□□□□ 0.37
DDR1-271ENST00000513240 PIBF1Q8WXW3 757 aa17.38■□□□□ 0.37
DDR1-271ENST00000513240 FTOQ9C0B1 505 aaKnown RBP eCLIP17.38■□□□□ 0.37
DDR1-271ENST00000513240 GPHNQ9NQX3 736 aaPredicted RBP17.38■□□□□ 0.37
DDR1-271ENST00000513240 GPTP24298 496 aa17.38■□□□□ 0.37
DDR1-271ENST00000513240 TTLL5Q6EMB2 1281 aa17.38■□□□□ 0.37
DDR1-271ENST00000513240 PI16Q6UXB8 463 aa17.38■□□□□ 0.37
DDR1-271ENST00000513240 RFX5P48382 616 aaPredicted RBP17.38■□□□□ 0.37
DDR1-271ENST00000513240 HAND2P61296 217 aa17.38■□□□□ 0.37
DDR1-271ENST00000513240 LRP10Q7Z4F1 713 aa17.38■□□□□ 0.37
DDR1-271ENST00000513240 NCOA5Q9HCD5 579 aaKnown RBP17.38■□□□□ 0.37
DDR1-271ENST00000513240 HEG1Q9ULI3 1381 aa17.37■□□□□ 0.37
DDR1-271ENST00000513240 TAF5LO75529 589 aa17.37■□□□□ 0.37
DDR1-271ENST00000513240 TOB2Q14106 344 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms