RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 HYPKQ9NX55 129 aa16.37■□□□□ 0.21
VEGFA-216ENST00000512683 WDR33Q9C0J8 1336 aaKnown RBP16.37■□□□□ 0.21
VEGFA-216ENST00000512683 NUP98P52948 1817 aa16.36■□□□□ 0.21
VEGFA-216ENST00000512683 ANXA1P04083 346 aa16.36■□□□□ 0.21
VEGFA-216ENST00000512683 HCLS1P14317 486 aaPredicted RBP16.36■□□□□ 0.21
VEGFA-216ENST00000512683 SF3B3Q15393 1217 aaKnown RBP16.36■□□□□ 0.21
VEGFA-216ENST00000512683 CIAPIN1Q6FI81 312 aa16.36■□□□□ 0.21
VEGFA-216ENST00000512683 TRIM35Q9UPQ4 493 aa16.36■□□□□ 0.21
VEGFA-216ENST00000512683 MAP2K2P36507 400 aa16.35■□□□□ 0.21
VEGFA-216ENST00000512683 NEUROD2Q15784 382 aa16.35■□□□□ 0.21
VEGFA-216ENST00000512683 HDGFL1Q5TGJ6 251 aa16.35■□□□□ 0.21
VEGFA-216ENST00000512683 HHIPL1Q96JK4 782 aa16.35■□□□□ 0.21
VEGFA-216ENST00000512683 ISCA1Q9BUE6 129 aa16.35■□□□□ 0.21
VEGFA-216ENST00000512683 PRKRIP1Q9H875 184 aaPredicted RBP16.35■□□□□ 0.21
VEGFA-216ENST00000512683 CACNA1SQ13698 1873 aa16.35■□□□□ 0.21
VEGFA-216ENST00000512683 CAPN15O75808 1086 aa16.34■□□□□ 0.21
VEGFA-216ENST00000512683 CALD1Q05682 793 aaKnown RBP16.34■□□□□ 0.21
VEGFA-216ENST00000512683 CST9Q5W186 159 aa16.34■□□□□ 0.21
VEGFA-216ENST00000512683 DPF2Q92785 391 aa16.34■□□□□ 0.21
VEGFA-216ENST00000512683 TLL2Q9Y6L7 1015 aa16.34■□□□□ 0.21
VEGFA-216ENST00000512683 H7C1D1 291 aa16.33■□□□□ 0.2
VEGFA-216ENST00000512683 NECTIN2Q92692 538 aa16.33■□□□□ 0.2
VEGFA-216ENST00000512683 BEGAINQ9BUH8 593 aa16.33■□□□□ 0.2
VEGFA-216ENST00000512683 BCL2L13Q9BXK5 485 aa16.33■□□□□ 0.2
VEGFA-216ENST00000512683 CHPF2Q9P2E5 772 aa16.33■□□□□ 0.2
VEGFA-216ENST00000512683 ADAMTS8Q9UP79 889 aa16.33■□□□□ 0.2
VEGFA-216ENST00000512683 LAS1LQ9Y4W2 734 aaKnown RBP16.33■□□□□ 0.2
VEGFA-216ENST00000512683 GMPSP49915 693 aaPredicted RBP16.32■□□□□ 0.2
VEGFA-216ENST00000512683 CDC37L1Q7L3B6 337 aa16.32■□□□□ 0.2
VEGFA-216ENST00000512683 CCDC146Q8IYE0 955 aa16.32■□□□□ 0.2
VEGFA-216ENST00000512683 ADAMTSL1Q8N6G6 1762 aa16.32■□□□□ 0.2
VEGFA-216ENST00000512683 CAPNS2Q96L46 248 aa16.32■□□□□ 0.2
VEGFA-216ENST00000512683 GPR101Q96P66 508 aaPredicted RBP16.32■□□□□ 0.2
VEGFA-216ENST00000512683 CA12O43570 354 aa16.31■□□□□ 0.2
VEGFA-216ENST00000512683 LBX1P52954 281 aa16.31■□□□□ 0.2
VEGFA-216ENST00000512683 WASHC4Q2M389 1173 aa16.31■□□□□ 0.2
VEGFA-216ENST00000512683 DUSP27Q5VZP5 1158 aa16.31■□□□□ 0.2
VEGFA-216ENST00000512683 EYA3Q99504 573 aa16.31■□□□□ 0.2
VEGFA-216ENST00000512683 CNOT7Q9UIV1 285 aaKnown RBP16.31■□□□□ 0.2
VEGFA-216ENST00000512683 COL4A5P29400 1685 aa16.3■□□□□ 0.2
VEGFA-216ENST00000512683 ZNF853P0CG23 659 aa16.3■□□□□ 0.2
VEGFA-216ENST00000512683 RPS12P25398 132 aaKnown RBP16.3■□□□□ 0.2
VEGFA-216ENST00000512683 RPS8P62241 208 aaKnown RBP16.3■□□□□ 0.2
VEGFA-216ENST00000512683 SAPCD2Q86UD0 394 aa16.3■□□□□ 0.2
VEGFA-216ENST00000512683 FAM89AQ96GI7 184 aa16.3■□□□□ 0.2
VEGFA-216ENST00000512683 RAD17O75943 681 aa16.29■□□□□ 0.2
VEGFA-216ENST00000512683 HSPA8P11142 646 aaKnown RBP16.29■□□□□ 0.2
VEGFA-216ENST00000512683 GNAI1P63096 354 aa16.29■□□□□ 0.2
VEGFA-216ENST00000512683 KRT24Q2M2I5 525 aa16.29■□□□□ 0.2
VEGFA-216ENST00000512683 ZBTB38Q8NAP3 1195 aaPredicted RBP16.29■□□□□ 0.2
VEGFA-216ENST00000512683 IFT57Q9NWB7 429 aa16.29■□□□□ 0.2
VEGFA-216ENST00000512683 NSFL1CQ9UNZ2 370 aaKnown RBP16.29■□□□□ 0.2
VEGFA-216ENST00000512683 IRS4O14654 1257 aaPredicted RBP16.28■□□□□ 0.2
VEGFA-216ENST00000512683 CELF2O95319 508 aaKnown RBP16.28■□□□□ 0.2
VEGFA-216ENST00000512683 GOLGA2Q08379 1002 aa16.28■□□□□ 0.2
VEGFA-216ENST00000512683 CCDC191Q8NCU4 936 aa16.28■□□□□ 0.2
VEGFA-216ENST00000512683 TRAF5O00463 557 aa16.27■□□□□ 0.2
VEGFA-216ENST00000512683 HIRAP54198 1017 aaPredicted RBP16.27■□□□□ 0.2
VEGFA-216ENST00000512683 RIC3Q7Z5B4 369 aa16.27■□□□□ 0.2
VEGFA-216ENST00000512683 CELF1Q92879 486 aaKnown RBP16.27■□□□□ 0.2
VEGFA-216ENST00000512683 MBIPQ9NS73 344 aa16.27■□□□□ 0.2
VEGFA-216ENST00000512683 PODXL2Q9NZ53 605 aa16.27■□□□□ 0.2
VEGFA-216ENST00000512683 YDJCA8MPS7 323 aa16.26■□□□□ 0.19
VEGFA-216ENST00000512683 ATP5J2-PTCD1G3V325 749 aa16.26■□□□□ 0.19
VEGFA-216ENST00000512683 ZEB1P37275 1124 aaPredicted RBP16.26■□□□□ 0.19
VEGFA-216ENST00000512683 CYP4F22Q6NT55 531 aa16.26■□□□□ 0.19
VEGFA-216ENST00000512683 PAXIP1Q6ZW49 1069 aaPredicted RBP16.26■□□□□ 0.19
VEGFA-216ENST00000512683 SLC51AQ86UW1 340 aa16.26■□□□□ 0.19
VEGFA-216ENST00000512683 ZC3H12CQ9C0D7 883 aaKnown RBP16.26■□□□□ 0.19
VEGFA-216ENST00000512683 C6orf229H3BNL8 230 aa16.25■□□□□ 0.19
VEGFA-216ENST00000512683 DDX58O95786 925 aaKnown RBP16.25■□□□□ 0.19
VEGFA-216ENST00000512683 BRPF1P55201 1214 aaPredicted RBP16.25■□□□□ 0.19
VEGFA-216ENST00000512683 FMR1Q06787 632 aaKnown RBP eCLIP16.25■□□□□ 0.19
VEGFA-216ENST00000512683 MICALL2Q8IY33 904 aa16.25■□□□□ 0.19
VEGFA-216ENST00000512683 GLIS2Q9BZE0 524 aaPredicted RBP16.25■□□□□ 0.19
VEGFA-216ENST00000512683 POLLQ9UGP5 575 aa16.25■□□□□ 0.19
VEGFA-216ENST00000512683 PCCAP05165 728 aaPredicted RBP16.24■□□□□ 0.19
VEGFA-216ENST00000512683 GPSM2P81274 684 aa16.24■□□□□ 0.19
VEGFA-216ENST00000512683 CCDC152Q4G0S7 254 aa16.24■□□□□ 0.19
VEGFA-216ENST00000512683 TBC1D16Q8TBP0 767 aa16.24■□□□□ 0.19
VEGFA-216ENST00000512683 ANKRD36CQ5JPF3 1778 aa16.23■□□□□ 0.19
VEGFA-216ENST00000512683 PSMD14O00487 310 aa16.23■□□□□ 0.19
VEGFA-216ENST00000512683 PDE8AO60658 829 aa16.23■□□□□ 0.19
VEGFA-216ENST00000512683 VIL1P09327 827 aaKnown RBP16.23■□□□□ 0.19
VEGFA-216ENST00000512683 NOGQ13253 232 aa16.23■□□□□ 0.19
VEGFA-216ENST00000512683 CCDC30Q5VVM6 783 aa16.23■□□□□ 0.19
VEGFA-216ENST00000512683 TRPM4Q8TD43 1214 aa16.23■□□□□ 0.19
VEGFA-216ENST00000512683 APAF1O14727 1248 aa16.22■□□□□ 0.19
VEGFA-216ENST00000512683 USP48Q86UV5 1035 aa16.22■□□□□ 0.19
VEGFA-216ENST00000512683 DCPSQ96C86 337 aaKnown RBP16.22■□□□□ 0.19
VEGFA-216ENST00000512683 ABHD8Q96I13 439 aa16.22■□□□□ 0.19
VEGFA-216ENST00000512683 CWC25Q9NXE8 425 aaPredicted RBP16.22■□□□□ 0.19
VEGFA-216ENST00000512683 LTBP1Q14766 1721 aa16.22■□□□□ 0.19
VEGFA-216ENST00000512683 G3V3G9 751 aa16.21■□□□□ 0.19
VEGFA-216ENST00000512683 RIMBP2O15034 1052 aa16.21■□□□□ 0.19
VEGFA-216ENST00000512683 ECE2O60344 883 aa16.21■□□□□ 0.19
VEGFA-216ENST00000512683 CCDC184Q52MB2 194 aa16.21■□□□□ 0.19
VEGFA-216ENST00000512683 NCBP3Q53F19 620 aaKnown RBP16.21■□□□□ 0.19
VEGFA-216ENST00000512683 DCAF8Q5TAQ9 597 aa16.21■□□□□ 0.19
VEGFA-216ENST00000512683 CCDC102AQ96A19 550 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms