RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 C10orf62Q5T681 223 aaPredicted RBP6.12□□□□□ -1.43
TRAPPC11-208ENST00000511955 TMEM164Q5U3C3 297 aa6.12□□□□□ -1.43
TRAPPC11-208ENST00000511955 CXorf56Q9H5V9 222 aa6.12□□□□□ -1.43
TRAPPC11-208ENST00000511955 THRAP3Q9Y2W1 955 aaKnown RBP6.12□□□□□ -1.43
TRAPPC11-208ENST00000511955 SMAPO00193 183 aa6.11□□□□□ -1.43
TRAPPC11-208ENST00000511955 TGFB3P10600 412 aa6.11□□□□□ -1.43
TRAPPC11-208ENST00000511955 PYGBP11216 843 aa6.11□□□□□ -1.43
TRAPPC11-208ENST00000511955 PRKAR2AP13861 404 aaKnown RBP6.11□□□□□ -1.43
TRAPPC11-208ENST00000511955 SCNN1AP37088 669 aa6.11□□□□□ -1.43
TRAPPC11-208ENST00000511955 GNALP38405 381 aa6.11□□□□□ -1.43
TRAPPC11-208ENST00000511955 CCDC92Q53HC0 331 aaPredicted RBP6.11□□□□□ -1.43
TRAPPC11-208ENST00000511955 LRRC59Q96AG4 307 aaKnown RBP6.11□□□□□ -1.43
TRAPPC11-208ENST00000511955 C8orf48Q96LL4 319 aa6.11□□□□□ -1.43
TRAPPC11-208ENST00000511955 ACBD3Q9H3P7 528 aa6.11□□□□□ -1.43
TRAPPC11-208ENST00000511955 CASS4Q9NQ75 786 aa6.11□□□□□ -1.43
TRAPPC11-208ENST00000511955 NOL7Q9UMY1 257 aaKnown RBP6.11□□□□□ -1.43
TRAPPC11-208ENST00000511955 LZTS1Q9Y250 596 aa6.11□□□□□ -1.43
TRAPPC11-208ENST00000511955 ADGRB2O60241 1585 aa6.11□□□□□ -1.43
TRAPPC11-208ENST00000511955 IFRD1O00458 451 aaPredicted RBP6.11□□□□□ -1.43
TRAPPC11-208ENST00000511955 TNNT2P45379 298 aaPredicted RBP6.11□□□□□ -1.43
TRAPPC11-208ENST00000511955 FXR2P51116 673 aaKnown RBP eCLIP6.11□□□□□ -1.43
TRAPPC11-208ENST00000511955 BRD3Q15059 726 aa6.11□□□□□ -1.43
TRAPPC11-208ENST00000511955 KANK3Q6NY19 840 aa6.11□□□□□ -1.43
TRAPPC11-208ENST00000511955 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.11□□□□□ -1.43
TRAPPC11-208ENST00000511955 RUNDC1Q96C34 613 aa6.11□□□□□ -1.43
TRAPPC11-208ENST00000511955 SEZ6LQ9BYH1 1024 aa6.11□□□□□ -1.43
TRAPPC11-208ENST00000511955 CCSER2Q9H7U1 834 aa6.11□□□□□ -1.43
TRAPPC11-208ENST00000511955 AVENQ9NQS1 362 aaPredicted RBP6.11□□□□□ -1.43
TRAPPC11-208ENST00000511955 CWC25Q9NXE8 425 aaPredicted RBP6.11□□□□□ -1.43
TRAPPC11-208ENST00000511955 ANKARQ7Z5J8 1434 aa6.1□□□□□ -1.43
TRAPPC11-208ENST00000511955 MAPRE1Q15691 268 aaKnown RBP6.1□□□□□ -1.43
TRAPPC11-208ENST00000511955 MEX3CQ5U5Q3 659 aaKnown RBP6.1□□□□□ -1.43
TRAPPC11-208ENST00000511955 ABTB2Q8N961 1025 aa6.1□□□□□ -1.43
TRAPPC11-208ENST00000511955 SVIPQ8NHG7 77 aa6.1□□□□□ -1.43
TRAPPC11-208ENST00000511955 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.1□□□□□ -1.43
TRAPPC11-208ENST00000511955 INTUQ9ULD6 942 aa6.1□□□□□ -1.43
TRAPPC11-208ENST00000511955 MRVI1Q9Y6F6 885 aa6.1□□□□□ -1.43
TRAPPC11-208ENST00000511955 PLIN1O60240 522 aa6.1□□□□□ -1.43
TRAPPC11-208ENST00000511955 MAP2K1Q02750 393 aaPredicted RBP6.1□□□□□ -1.43
TRAPPC11-208ENST00000511955 TBC1D10BQ4KMP7 808 aaPredicted RBP6.1□□□□□ -1.43
TRAPPC11-208ENST00000511955 PPP4R4Q6NUP7 873 aa6.1□□□□□ -1.43
TRAPPC11-208ENST00000511955 METTL16Q86W50 562 aaKnown RBP6.1□□□□□ -1.43
TRAPPC11-208ENST00000511955 AGBL1Q96MI9 1066 aa6.1□□□□□ -1.43
TRAPPC11-208ENST00000511955 UCN2Q96RP3 112 aa6.1□□□□□ -1.43
TRAPPC11-208ENST00000511955 TSPYL2Q9H2G4 693 aaPredicted RBP6.1□□□□□ -1.43
TRAPPC11-208ENST00000511955 ABCF2Q9UG63 623 aa6.1□□□□□ -1.43
TRAPPC11-208ENST00000511955 HDAC9Q9UKV0 1011 aa6.1□□□□□ -1.43
TRAPPC11-208ENST00000511955 KTN1Q86UP2 1357 aaKnown RBP6.1□□□□□ -1.43
TRAPPC11-208ENST00000511955 SOS2Q07890 1332 aaPredicted RBP6.09□□□□□ -1.43
TRAPPC11-208ENST00000511955 GNPATO15228 680 aa6.09□□□□□ -1.43
TRAPPC11-208ENST00000511955 IGHDP01880 384 aa6.09□□□□□ -1.43
TRAPPC11-208ENST00000511955 FLT3P36888 993 aa6.09□□□□□ -1.43
TRAPPC11-208ENST00000511955 CALD1Q05682 793 aaKnown RBP6.09□□□□□ -1.43
TRAPPC11-208ENST00000511955 PSMD2Q13200 908 aa6.09□□□□□ -1.43
TRAPPC11-208ENST00000511955 LDLRAD1Q5T700 205 aa6.09□□□□□ -1.43
TRAPPC11-208ENST00000511955 HDGFL2Q7Z4V5 671 aaPredicted RBP6.09□□□□□ -1.43
TRAPPC11-208ENST00000511955 ZRANB1Q9UGI0 708 aa6.09□□□□□ -1.43
TRAPPC11-208ENST00000511955 ZMIZ1Q9ULJ6 1067 aa6.09□□□□□ -1.43
TRAPPC11-208ENST00000511955 ATAD2Q6PL18 1390 aa6.09□□□□□ -1.43
TRAPPC11-208ENST00000511955 COL16A1Q07092 1604 aaPredicted RBP6.09□□□□□ -1.43
TRAPPC11-208ENST00000511955 TNFRSF10BO14763 440 aa6.09□□□□□ -1.43
TRAPPC11-208ENST00000511955 LMNB1P20700 586 aa6.09□□□□□ -1.43
TRAPPC11-208ENST00000511955 NLRP6P59044 892 aa6.09□□□□□ -1.43
TRAPPC11-208ENST00000511955 CBLBQ13191 982 aa6.09□□□□□ -1.43
TRAPPC11-208ENST00000511955 ALDH1L2Q3SY69 923 aa6.09□□□□□ -1.43
TRAPPC11-208ENST00000511955 CCSAPQ6IQ19 270 aaPredicted RBP6.09□□□□□ -1.43
TRAPPC11-208ENST00000511955 FERMT3Q86UX7 667 aa6.09□□□□□ -1.43
TRAPPC11-208ENST00000511955 PPM1EQ8WY54 764 aa6.09□□□□□ -1.43
TRAPPC11-208ENST00000511955 SLC39A13Q96H72 371 aa6.09□□□□□ -1.43
TRAPPC11-208ENST00000511955 BEGAINQ9BUH8 593 aa6.09□□□□□ -1.43
TRAPPC11-208ENST00000511955 ALDH8A1Q9H2A2 487 aaPredicted RBP6.09□□□□□ -1.43
TRAPPC11-208ENST00000511955 PPCSQ9HAB8 311 aa6.09□□□□□ -1.43
TRAPPC11-208ENST00000511955 TMEM51Q9NW97 253 aa6.09□□□□□ -1.43
TRAPPC11-208ENST00000511955 AKAP2Q9Y2D5 859 aa6.09□□□□□ -1.43
TRAPPC11-208ENST00000511955 JCADQ9P266 1359 aa6.09□□□□□ -1.44
TRAPPC11-208ENST00000511955 PXDNQ92626 1479 aa6.09□□□□□ -1.44
TRAPPC11-208ENST00000511955 KIF7Q2M1P5 1343 aa6.08□□□□□ -1.44
TRAPPC11-208ENST00000511955 SPATA31A3Q5VYP0 1347 aa6.08□□□□□ -1.44
TRAPPC11-208ENST00000511955 A0A1W2PP64 1363 aa6.08□□□□□ -1.44
TRAPPC11-208ENST00000511955 VIL1P09327 827 aaKnown RBP6.08□□□□□ -1.44
TRAPPC11-208ENST00000511955 NFE2L2Q16236 605 aa6.08□□□□□ -1.44
TRAPPC11-208ENST00000511955 CHRDL2Q6WN34 429 aa6.08□□□□□ -1.44
TRAPPC11-208ENST00000511955 NME9Q86XW9 330 aa6.08□□□□□ -1.44
TRAPPC11-208ENST00000511955 VPS37AQ8NEZ2 397 aa6.08□□□□□ -1.44
TRAPPC11-208ENST00000511955 ARMC5Q96C12 935 aa6.08□□□□□ -1.44
TRAPPC11-208ENST00000511955 AHDC1Q5TGY3 1603 aaPredicted RBP6.08□□□□□ -1.44
TRAPPC11-208ENST00000511955 WASHC2AQ641Q2 1341 aa6.08□□□□□ -1.44
TRAPPC11-208ENST00000511955 PNPLA6Q8IY17 1366 aa6.08□□□□□ -1.44
TRAPPC11-208ENST00000511955 HMMRO75330 724 aa6.08□□□□□ -1.44
TRAPPC11-208ENST00000511955 FBLN1P23142 703 aa6.08□□□□□ -1.44
TRAPPC11-208ENST00000511955 RBL2Q08999 1139 aa6.08□□□□□ -1.44
TRAPPC11-208ENST00000511955 SIM2Q14190 667 aaPredicted RBP6.08□□□□□ -1.44
TRAPPC11-208ENST00000511955 MRPL58Q14197 206 aaKnown RBP6.08□□□□□ -1.44
TRAPPC11-208ENST00000511955 TOMM20Q15388 145 aa6.08□□□□□ -1.44
TRAPPC11-208ENST00000511955 ZKSCAN8Q15776 578 aaPredicted RBP6.08□□□□□ -1.44
TRAPPC11-208ENST00000511955 CCDC93Q567U6 631 aa6.08□□□□□ -1.44
TRAPPC11-208ENST00000511955 MYSM1Q5VVJ2 828 aa6.08□□□□□ -1.44
TRAPPC11-208ENST00000511955 SUGP1Q8IWZ8 645 aaKnown RBP6.08□□□□□ -1.44
TRAPPC11-208ENST00000511955 CCDC47Q96A33 483 aaKnown RBP6.08□□□□□ -1.44
TRAPPC11-208ENST00000511955 CEP89Q96ST8 783 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms