RNA–Protein interactions for RNA: ENST00000511667.5

CLDND1-224, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-224ENST00000511667 GPR101Q96P66 508 aaPredicted RBP17.46■□□□□ 0.39
CLDND1-224ENST00000511667 DDX60Q8IY21 1712 aaKnown RBP17.45■□□□□ 0.38
CLDND1-224ENST00000511667 FKBP4Q02790 459 aaKnown RBP eCLIP17.45■□□□□ 0.38
CLDND1-224ENST00000511667 CC2D2BQ6DHV5 1058 aa17.45■□□□□ 0.38
CLDND1-224ENST00000511667 WDR63Q8IWG1 891 aa17.45■□□□□ 0.38
CLDND1-224ENST00000511667 RTKN2Q8IZC4 609 aa17.45■□□□□ 0.38
CLDND1-224ENST00000511667 PSMD1Q99460 953 aa17.45■□□□□ 0.38
CLDND1-224ENST00000511667 CA12O43570 354 aa17.44■□□□□ 0.38
CLDND1-224ENST00000511667 PRPF38BQ5VTL8 546 aaKnown RBP17.44■□□□□ 0.38
CLDND1-224ENST00000511667 SYNE4Q8N205 404 aa17.44■□□□□ 0.38
CLDND1-224ENST00000511667 TSR2Q969E8 191 aaKnown RBP17.44■□□□□ 0.38
CLDND1-224ENST00000511667 CHMP4AQ9BY43 222 aa17.44■□□□□ 0.38
CLDND1-224ENST00000511667 PHAXQ9H814 394 aaKnown RBP17.44■□□□□ 0.38
CLDND1-224ENST00000511667 TSKSQ9UJT2 592 aa17.44■□□□□ 0.38
CLDND1-224ENST00000511667 ELL2O00472 640 aaPredicted RBP17.43■□□□□ 0.38
CLDND1-224ENST00000511667 GRM1Q13255 1194 aa17.43■□□□□ 0.38
CLDND1-224ENST00000511667 GRIPAP1Q4V328 841 aa17.43■□□□□ 0.38
CLDND1-224ENST00000511667 NLRP3Q96P20 1036 aa17.43■□□□□ 0.38
CLDND1-224ENST00000511667 SH3TC1Q8TE82 1336 aa17.43■□□□□ 0.38
CLDND1-224ENST00000511667 ZNF521Q96K83 1311 aa17.43■□□□□ 0.38
CLDND1-224ENST00000511667 DGKZQ13574 1117 aa17.42■□□□□ 0.38
CLDND1-224ENST00000511667 CCDC30Q5VVM6 783 aa17.42■□□□□ 0.38
CLDND1-224ENST00000511667 CYP4F22Q6NT55 531 aa17.42■□□□□ 0.38
CLDND1-224ENST00000511667 CASP8AP2Q9UKL3 1982 aa17.41■□□□□ 0.38
CLDND1-224ENST00000511667 MAP2K2P36507 400 aa17.41■□□□□ 0.38
CLDND1-224ENST00000511667 SLC51AQ86UW1 340 aa17.41■□□□□ 0.38
CLDND1-224ENST00000511667 RPGRQ92834 1020 aaKnown RBP17.41■□□□□ 0.38
CLDND1-224ENST00000511667 RBM17Q96I25 401 aaKnown RBP17.41■□□□□ 0.38
CLDND1-224ENST00000511667 TRMT112Q9UI30 125 aaKnown RBP17.41■□□□□ 0.38
CLDND1-224ENST00000511667 COL4A5P29400 1685 aa17.41■□□□□ 0.38
CLDND1-224ENST00000511667 ABCC4O15439 1325 aa17.41■□□□□ 0.38
CLDND1-224ENST00000511667 FANCIQ9NVI1 1328 aa17.41■□□□□ 0.38
CLDND1-224ENST00000511667 LTBP1Q14766 1721 aa17.41■□□□□ 0.38
CLDND1-224ENST00000511667 CACNA1FO60840 1977 aa17.4■□□□□ 0.38
CLDND1-224ENST00000511667 SF3B3Q15393 1217 aaKnown RBP17.4■□□□□ 0.38
CLDND1-224ENST00000511667 LRRC37AA6NMS7 1700 aa17.4■□□□□ 0.38
CLDND1-224ENST00000511667 ZNF541Q9H0D2 1346 aa17.4■□□□□ 0.38
CLDND1-224ENST00000511667 FZD9O00144 591 aa17.39■□□□□ 0.37
CLDND1-224ENST00000511667 HCLS1P14317 486 aaPredicted RBP17.39■□□□□ 0.37
CLDND1-224ENST00000511667 RTFDC1Q9BY42 306 aaPredicted RBP17.39■□□□□ 0.37
CLDND1-224ENST00000511667 SPINK5Q9NQ38 1064 aaPredicted RBP17.39■□□□□ 0.37
CLDND1-224ENST00000511667 ATP6V0A2Q9Y487 856 aa17.39■□□□□ 0.37
CLDND1-224ENST00000511667 ATP5J2-PTCD1G3V325 749 aa17.38■□□□□ 0.37
CLDND1-224ENST00000511667 PPEF1O14829 653 aaPredicted RBP17.38■□□□□ 0.37
CLDND1-224ENST00000511667 BBOX1O75936 387 aa17.38■□□□□ 0.37
CLDND1-224ENST00000511667 TWISTNBQ3B726 338 aaPredicted RBP17.38■□□□□ 0.37
CLDND1-224ENST00000511667 METTL22Q9BUU2 404 aaPredicted RBP17.38■□□□□ 0.37
CLDND1-224ENST00000511667 ZNF277Q9NRM2 450 aaPredicted RBP17.38■□□□□ 0.37
CLDND1-224ENST00000511667 COL4A1P02462 1669 aa17.37■□□□□ 0.37
CLDND1-224ENST00000511667 VAMP4O75379 141 aa17.37■□□□□ 0.37
CLDND1-224ENST00000511667 IARSP41252 1262 aaKnown RBP17.37■□□□□ 0.37
CLDND1-224ENST00000511667 GOLGA2Q08379 1002 aa17.37■□□□□ 0.37
CLDND1-224ENST00000511667 ZBTB38Q8NAP3 1195 aaPredicted RBP17.37■□□□□ 0.37
CLDND1-224ENST00000511667 CCDC191Q8NCU4 936 aa17.37■□□□□ 0.37
CLDND1-224ENST00000511667 FAM89AQ96GI7 184 aa17.37■□□□□ 0.37
CLDND1-224ENST00000511667 TAF1P21675 1872 aa17.36■□□□□ 0.37
CLDND1-224ENST00000511667 AOC2O75106 756 aa17.36■□□□□ 0.37
CLDND1-224ENST00000511667 KSR2Q6VAB6 950 aa17.36■□□□□ 0.37
CLDND1-224ENST00000511667 RIC3Q7Z5B4 369 aa17.36■□□□□ 0.37
CLDND1-224ENST00000511667 SP8Q8IXZ3 490 aa17.36■□□□□ 0.37
CLDND1-224ENST00000511667 VPS33BQ9H267 617 aa17.36■□□□□ 0.37
CLDND1-224ENST00000511667 TLL2Q9Y6L7 1015 aa17.36■□□□□ 0.37
CLDND1-224ENST00000511667 PCCAP05165 728 aaPredicted RBP17.35■□□□□ 0.37
CLDND1-224ENST00000511667 IGKV5-2P06315 115 aa17.35■□□□□ 0.37
CLDND1-224ENST00000511667 GRAPQ13588 217 aa17.35■□□□□ 0.37
CLDND1-224ENST00000511667 G2E3Q7L622 706 aa17.35■□□□□ 0.37
CLDND1-224ENST00000511667 GRAPLQ8TC17 118 aaPredicted RBP17.35■□□□□ 0.37
CLDND1-224ENST00000511667 DUOX1Q9NRD9 1551 aa17.35■□□□□ 0.37
CLDND1-224ENST00000511667 BRPF1P55201 1214 aaPredicted RBP17.34■□□□□ 0.37
CLDND1-224ENST00000511667 SOX10P56693 466 aa17.34■□□□□ 0.37
CLDND1-224ENST00000511667 TMC4Q7Z404 712 aa17.34■□□□□ 0.37
CLDND1-224ENST00000511667 FAM9BQ8IZU0 186 aa17.34■□□□□ 0.37
CLDND1-224ENST00000511667 GPC2Q8N158 579 aa17.34■□□□□ 0.37
CLDND1-224ENST00000511667 TRPM7Q96QT4 1865 aa17.34■□□□□ 0.37
CLDND1-224ENST00000511667 PI4KAP2A4QPH2 592 aa17.33■□□□□ 0.36
CLDND1-224ENST00000511667 IRS4O14654 1257 aaPredicted RBP17.33■□□□□ 0.36
CLDND1-224ENST00000511667 DDX58O95786 925 aaKnown RBP17.33■□□□□ 0.36
CLDND1-224ENST00000511667 PI4KAP1Q8N8J0 262 aa17.33■□□□□ 0.36
CLDND1-224ENST00000511667 MYD88Q99836 296 aa17.33■□□□□ 0.36
CLDND1-224ENST00000511667 MAP3K2Q9Y2U5 619 aa17.33■□□□□ 0.36
CLDND1-224ENST00000511667 CDHR2Q9BYE9 1310 aa17.32■□□□□ 0.36
CLDND1-224ENST00000511667 SLC4A2P04920 1241 aa17.32■□□□□ 0.36
CLDND1-224ENST00000511667 EXOSC9Q06265 439 aaKnown RBP17.32■□□□□ 0.36
CLDND1-224ENST00000511667 CST9Q5W186 159 aa17.32■□□□□ 0.36
CLDND1-224ENST00000511667 DDX46Q7L014 1031 aaKnown RBP17.32■□□□□ 0.36
CLDND1-224ENST00000511667 STK31Q9BXU1 1019 aa17.32■□□□□ 0.36
CLDND1-224ENST00000511667 CWC25Q9NXE8 425 aaPredicted RBP17.32■□□□□ 0.36
CLDND1-224ENST00000511667 LMOD1P29536 600 aaPredicted RBP17.31■□□□□ 0.36
CLDND1-224ENST00000511667 FMR1Q06787 632 aaKnown RBP eCLIP17.31■□□□□ 0.36
CLDND1-224ENST00000511667 FLIIQ13045 1269 aa17.3■□□□□ 0.36
CLDND1-224ENST00000511667 CELF1Q92879 486 aaKnown RBP17.3■□□□□ 0.36
CLDND1-224ENST00000511667 ZNF428Q96B54 188 aa17.3■□□□□ 0.36
CLDND1-224ENST00000511667 NEURL1BA8MQ27 555 aa17.29■□□□□ 0.36
CLDND1-224ENST00000511667 TCERG1O14776 1098 aaKnown RBP17.29■□□□□ 0.36
CLDND1-224ENST00000511667 GCC1Q96CN9 775 aa17.29■□□□□ 0.36
CLDND1-224ENST00000511667 HHIPL1Q96JK4 782 aa17.29■□□□□ 0.36
CLDND1-224ENST00000511667 MYH16Q9H6N6 1097 aa17.29■□□□□ 0.36
CLDND1-224ENST00000511667 SALL2Q9Y467 1007 aaPredicted RBP17.29■□□□□ 0.36
CLDND1-224ENST00000511667 H7C1W4 665 aa17.28■□□□□ 0.36
CLDND1-224ENST00000511667 CCER2I3L3R5 266 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms