RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 GOPCQ9HD26 462 aa9.52□□□□□ -0.88
HTT-208ENST00000510626 PRXQ9BXM0 1461 aa9.52□□□□□ -0.88
HTT-208ENST00000510626 PPP4R3AQ6IN85 833 aa9.52□□□□□ -0.89
HTT-208ENST00000510626 CALML4Q96GE6 196 aa9.52□□□□□ -0.89
HTT-208ENST00000510626 AMOTQ4VCS5 1084 aa9.52□□□□□ -0.89
HTT-208ENST00000510626 NUTM2DQ5VT03 806 aaPredicted RBP9.52□□□□□ -0.89
HTT-208ENST00000510626 NUTM2AQ8IVF1 878 aaPredicted RBP9.52□□□□□ -0.89
HTT-208ENST00000510626 CCDC40Q4G0X9 1142 aa9.52□□□□□ -0.89
HTT-208ENST00000510626 ITSN2Q9NZM3 1697 aa9.52□□□□□ -0.89
HTT-208ENST00000510626 ECHDC1Q9NTX5 307 aa9.52□□□□□ -0.89
HTT-208ENST00000510626 PSMA7O14818 248 aa9.52□□□□□ -0.89
HTT-208ENST00000510626 PPFIBP2Q8ND30 876 aa9.52□□□□□ -0.89
HTT-208ENST00000510626 ERMNQ8TAM6 284 aa9.52□□□□□ -0.89
HTT-208ENST00000510626 TSR2Q969E8 191 aaKnown RBP9.52□□□□□ -0.89
HTT-208ENST00000510626 BCAP29Q9UHQ4 241 aa9.52□□□□□ -0.89
HTT-208ENST00000510626 AOX1Q06278 1338 aa9.52□□□□□ -0.89
HTT-208ENST00000510626 CNNM2Q9H8M5 875 aa9.52□□□□□ -0.89
HTT-208ENST00000510626 CWC25Q9NXE8 425 aaPredicted RBP9.52□□□□□ -0.89
HTT-208ENST00000510626 GOLGA8BA8MQT2 603 aa9.52□□□□□ -0.89
HTT-208ENST00000510626 UBE4AQ14139 1066 aa9.52□□□□□ -0.89
HTT-208ENST00000510626 NEBLO76041 1014 aa9.51□□□□□ -0.89
HTT-208ENST00000510626 HCLS1P14317 486 aaPredicted RBP9.51□□□□□ -0.89
HTT-208ENST00000510626 KLHL10Q6JEL2 608 aa9.51□□□□□ -0.89
HTT-208ENST00000510626 SPDYE4A6NLX3 237 aa9.51□□□□□ -0.89
HTT-208ENST00000510626 KDM4AO75164 1064 aa9.51□□□□□ -0.89
HTT-208ENST00000510626 MAP3K12Q12852 859 aa9.51□□□□□ -0.89
HTT-208ENST00000510626 MTIF2P46199 727 aaKnown RBP9.51□□□□□ -0.89
HTT-208ENST00000510626 LARSQ9P2J5 1176 aaKnown RBP9.51□□□□□ -0.89
HTT-208ENST00000510626 MRVI1Q9Y6F6 885 aa9.51□□□□□ -0.89
HTT-208ENST00000510626 CKAP2LQ8IYA6 745 aa9.51□□□□□ -0.89
HTT-208ENST00000510626 MRPS27Q92552 414 aaKnown RBP9.51□□□□□ -0.89
HTT-208ENST00000510626 TROQ12816 1431 aaPredicted RBP9.51□□□□□ -0.89
HTT-208ENST00000510626 BRD3Q15059 726 aa9.51□□□□□ -0.89
HTT-208ENST00000510626 GRIPAP1Q4V328 841 aa9.51□□□□□ -0.89
HTT-208ENST00000510626 CCDC26Q8TAB7 109 aa9.51□□□□□ -0.89
HTT-208ENST00000510626 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.51□□□□□ -0.89
HTT-208ENST00000510626 NUP160Q12769 1436 aa9.51□□□□□ -0.89
HTT-208ENST00000510626 MAP2K2P36507 400 aa9.51□□□□□ -0.89
HTT-208ENST00000510626 CCDC174Q6PII3 467 aa9.51□□□□□ -0.89
HTT-208ENST00000510626 TYRO3Q06418 890 aa9.51□□□□□ -0.89
HTT-208ENST00000510626 PDE6BP35913 854 aa9.51□□□□□ -0.89
HTT-208ENST00000510626 IKQ13123 557 aaPredicted RBP9.51□□□□□ -0.89
HTT-208ENST00000510626 CUL5Q93034 780 aa9.51□□□□□ -0.89
HTT-208ENST00000510626 MAP7Q14244 749 aa9.51□□□□□ -0.89
HTT-208ENST00000510626 CEP57Q86XR8 500 aa9.51□□□□□ -0.89
HTT-208ENST00000510626 ZC3H15Q8WU90 426 aaKnown RBP9.51□□□□□ -0.89
HTT-208ENST00000510626 CABP2Q9NPB3 220 aa9.51□□□□□ -0.89
HTT-208ENST00000510626 GJB2P29033 226 aa9.51□□□□□ -0.89
HTT-208ENST00000510626 ARID4AP29374 1257 aaPredicted RBP9.51□□□□□ -0.89
HTT-208ENST00000510626 INPP5BP32019 993 aa9.51□□□□□ -0.89
HTT-208ENST00000510626 GFM2Q969S9 779 aaKnown RBP9.51□□□□□ -0.89
HTT-208ENST00000510626 C1orf115Q9H7X2 142 aa9.51□□□□□ -0.89
HTT-208ENST00000510626 CCDC96Q2M329 555 aa9.51□□□□□ -0.89
HTT-208ENST00000510626 IQCA1Q86XH1 822 aa9.51□□□□□ -0.89
HTT-208ENST00000510626 SSH1Q8WYL5 1049 aa9.51□□□□□ -0.89
HTT-208ENST00000510626 EXOC1Q9NV70 894 aa9.51□□□□□ -0.89
HTT-208ENST00000510626 PHLDB2Q86SQ0 1253 aa9.5□□□□□ -0.89
HTT-208ENST00000510626 NECTIN2Q92692 538 aa9.5□□□□□ -0.89
HTT-208ENST00000510626 STMN2Q93045 179 aa9.5□□□□□ -0.89
HTT-208ENST00000510626 CSRNP2Q9H175 543 aa9.5□□□□□ -0.89
HTT-208ENST00000510626 THEGQ9P2T0 379 aa9.5□□□□□ -0.89
HTT-208ENST00000510626 AKR1B10O60218 316 aa9.5□□□□□ -0.89
HTT-208ENST00000510626 TRIM27P14373 513 aa9.5□□□□□ -0.89
HTT-208ENST00000510626 TTF2Q9UNY4 1162 aaKnown RBP9.5□□□□□ -0.89
HTT-208ENST00000510626 CFTRP13569 1480 aa9.5□□□□□ -0.89
HTT-208ENST00000510626 IQCGQ9H095 443 aaKnown RBP9.5□□□□□ -0.89
HTT-208ENST00000510626 HOMER2Q9NSB8 354 aa9.5□□□□□ -0.89
HTT-208ENST00000510626 GBP7Q8N8V2 638 aaPredicted RBP9.5□□□□□ -0.89
HTT-208ENST00000510626 PLCB1Q9NQ66 1216 aa9.5□□□□□ -0.89
HTT-208ENST00000510626 PPP2R3AQ06190 1150 aa9.5□□□□□ -0.89
HTT-208ENST00000510626 GNAT3A8MTJ3 354 aa9.5□□□□□ -0.89
HTT-208ENST00000510626 VWA3BQ502W6 1294 aa9.5□□□□□ -0.89
HTT-208ENST00000510626 FAM135AQ9P2D6 1515 aa9.5□□□□□ -0.89
HTT-208ENST00000510626 PTPN23Q9H3S7 1636 aa9.5□□□□□ -0.89
HTT-208ENST00000510626 ATRIPQ8WXE1 791 aa9.5□□□□□ -0.89
HTT-208ENST00000510626 NAIPQ13075 1403 aa9.5□□□□□ -0.89
HTT-208ENST00000510626 CEP120Q8N960 986 aa9.5□□□□□ -0.89
HTT-208ENST00000510626 IFT20Q8IY31 132 aa9.5□□□□□ -0.89
HTT-208ENST00000510626 PPP1R14CQ8TAE6 165 aa9.5□□□□□ -0.89
HTT-208ENST00000510626 GNAQP50148 359 aa9.5□□□□□ -0.89
HTT-208ENST00000510626 ZBTB16Q05516 673 aa9.5□□□□□ -0.89
HTT-208ENST00000510626 CPLX4Q7Z7G2 160 aa9.5□□□□□ -0.89
HTT-208ENST00000510626 KRT23Q9C075 422 aa9.5□□□□□ -0.89
HTT-208ENST00000510626 APLFQ8IW19 511 aaPredicted RBP9.49□□□□□ -0.89
HTT-208ENST00000510626 P3H4Q92791 437 aa9.49□□□□□ -0.89
HTT-208ENST00000510626 CCDC194A0A1B0GVG4 234 aa9.49□□□□□ -0.89
HTT-208ENST00000510626 GGNBP2Q9H3C7 697 aa9.49□□□□□ -0.89
HTT-208ENST00000510626 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.49□□□□□ -0.894e-6■■□□□ 13.7
HTT-208ENST00000510626 CC2D2AQ9P2K1 1620 aa9.49□□□□□ -0.89
HTT-208ENST00000510626 BICDL1Q6ZP65 573 aa9.49□□□□□ -0.89
HTT-208ENST00000510626 MTMR3Q13615 1198 aa9.49□□□□□ -0.89
HTT-208ENST00000510626 APBA1Q02410 837 aa9.49□□□□□ -0.89
HTT-208ENST00000510626 GOLGA5Q8TBA6 731 aa9.49□□□□□ -0.89
HTT-208ENST00000510626 TCHPQ9BT92 498 aa9.49□□□□□ -0.89
HTT-208ENST00000510626 STK24Q9Y6E0 443 aa9.49□□□□□ -0.89
HTT-208ENST00000510626 TDRD12Q587J7 1177 aaKnown RBP9.49□□□□□ -0.89
HTT-208ENST00000510626 MICALL1Q8N3F8 863 aa9.49□□□□□ -0.89
HTT-208ENST00000510626 DNAI1Q9UI46 699 aa9.49□□□□□ -0.89
HTT-208ENST00000510626 LLPHQ9BRT6 129 aaKnown RBP9.49□□□□□ -0.89
HTT-208ENST00000510626 NLRP2Q9NX02 1062 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms